choline dehydrogenase, snap_masked-scaffold2_size2283618-processed-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000000122 (supercontig:LSalAtl2s:LSalAtl2s101:523216:528117:1 gene:EMLSAG00000000122 transcript:EMLSAT00000000122 description:"maker-LSalAtl2s101-snap-gene-5.35") HSP 1 Score: 337.035 bits (863), Expect = 2.756e-108 Identity = 180/437 (41.19%), Postives = 261/437 (59.73%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 MVYIRG ED + W G EGW Y + LP+FK ++ ++ Y G +GPL VS N+L +++EAG AG D NG Q G+ ++++T ++G R S A AYL PA R NL+ A VTR+L +G++A G+EY+ GK EVIL G+I SPQLLMLSG+G A L+++ + ++ GVG+NL DHL + V+ K+P +L KGL + G ++ Q G ++ ESGGF S P+I HF+P V G + +H +R + G I+L S +P D P+I +L TD ++ MRE ++++R IFA AF E APG+++T+ ++++ ++R A++ YHP TCKMG SD+ +VVD RV G++GLRV+DASIMP + SGN NAPT+MIAE+AA +I Sbjct: 347 MVYIRGHAEDQNRWESEGAEGWNYQNCLPYFKKAQTHEWG--PSAYRGGNGPLHVSRGTSNNSLHSVWLEAGQQAGYPFTDDVNGYQQEGMSQFEMTIKKGMRNSTASAYLRPALSRPNLTTEVGALVTRILFDGKRAIGIEYLRNGKELKRVYADEVILSGGSINSPQLLMLSGVGPAQHLKEMDIPLVADIQGVGQNLQDHLEVYVVQECKKPITLLKDQKGLRMIQVGLQWFYNQTGSASTTHLESGGFVRSRPDVSHPNIMFHFLPSQVIDHGRQSPKIEAYQVHVGPMRSSSRGWIQLKSNDPRDHPIIQPNYLSTDFDVHEMRESVRLSRNIFAQPAFDPYRGIEIAPGHELTSDKDIDAFIRDKADSAYHPSCTCKMGSTSDNMTVVDPCTRVVGLEGLRVVDASIMPSIASGNLNAPTIMIAERAADII 781
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000012767 (supercontig:LSalAtl2s:LSalAtl2s96:160426:167507:-1 gene:EMLSAG00000012767 transcript:EMLSAT00000012767 description:"maker-LSalAtl2s96-snap-gene-1.14") HSP 1 Score: 232.646 bits (592), Expect = 3.551e-70 Identity = 166/470 (35.32%), Postives = 233/470 (49.57%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKAT--GVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLA-SIKEPTSLY-SASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGR----PDIQLHFIPMLVPPPGIKGVDR-HGITLHACN-----------------LRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAF----AKLIKDEHAPG---NKITTKEELNQYVRRHAETEYHPVGTCKMGS--DSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 M+Y+RG +DYD W + GN GW Y++VL +FK SE+N+ P PL + FVE G G N D NG Q+G Q T R G RCS + A+L P + R NL I A+V +VL++ + T GV + G+ +EVI+ AGAI S QLLMLSGIG L+ +G+ +LP +G+NL DH L +I +P SL S + L S++ KY + G T G + + R PDI+ HF V G + + + HG++ LRP G IRL S NP + P+++ + ++ V+ EG+K + T AF A+ PG + + T R++ T YH GT KMG D SVV+ +L+V GV+GLRVID SI+PK+ SGNTNAP +MI E+ A +I Sbjct: 162 MLYVRGNRKDYDIWANDGNPGWDYNNVLHYFKKSEDNR----NPYLAATKTPLATA-----------FVEGGVEMGY-ENRDCNGEFQTGFMLPQGTIRRGSRCSTSKAFLRPIRHRNNLXIAKNAYVMKVLIDPSRKTAYGVRFRRNGRVFEVHARKEVIMSAGAINSAQLLMLSGIGPGWHLQNLGIPIIQDLP-IGENLMDHYGTGALTFTIDQPISLVQSRYENLPSIL---KYAIFGTGPLTVLGGVEGLAWVPTKFENRTEDWPDIEFHFASGSVASDGGRQIRKVHGLSDSVWKMFRPLAYKDTFSILPMLLRPKSKGTIRLKSKNPFEKPIVNAGYFTHPDDMKVLVEGIKFGLALAQTKAFKKFGARFWDKVPMPGCENSPLWTDSYWAXIXRQYTTTIYHYSGTAKMGPPHDPSSVVNHELKVYGVKGLRVIDXSIIPKIPSGNTNAPVIMIGERGADLI 611
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000005902 (supercontig:LSalAtl2s:LSalAtl2s319:39372:42896:1 gene:EMLSAG00000005902 transcript:EMLSAT00000005902 description:"snap_masked-LSalAtl2s319-processed-gene-0.21") HSP 1 Score: 167.548 bits (423), Expect = 9.811e-47 Identity = 117/345 (33.91%), Postives = 175/345 (50.72%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANI-EPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNP-AKGRENLSIITQAHVTRVLLEGEK--ATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNG-IGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRH---------------------GITLHACNLRPTDVGEIRLASANPLDAPLIDNRFL 319 M+Y+RG D+DEW +MG EGWGY VLP+FK SE G + ++HG G + VSD Y ++ ++ E AGL D+N +Q+G Q+T R G R +Y+ P R NL I+T +HVT++L + K TGVE + GKT+ ++E+IL AGAI SP +LM SG+G A L+ + + +LP VG NL DH+ + + ++ + + + S T Y + G + T+ A + GF ++QLHFI VP G+ I++ LRP G IRL+S++PL +PLI+ +L Sbjct: 138 MLYVRGNKRDFDEWEEMGFEGWGYEKVLPYFKKSELQLGRYAHDTKHHGTEGNVPVSDSIYITPMAKVYKELAQLAGLPIR-DYNAENQTGFDIPQLTMRNGWRGDPYRSYIEPIMNKRPNLKILTYSHVTKLLFDDNKKIVTGVELLRFGKTYNVSASKEIILSAGAIGSPTILMHSGVGHAQHLKDLNIPLVKDLP-VGDNLQDHITTMLGPLLVNQSASFDVIETM-SFSTMWDYFVHGKGPLSTTVAVDFNGFLVD------ENVQLHFIG--VPLYADYGLHSRKTFNIDSTLWDDYFSKLYGLSSISVLPALLRPKSRGTIRLSSSDPLASPLINPNYL 471
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000013076 (supercontig:LSalAtl2s:LSalAtl2s9:868318:874523:1 gene:EMLSAG00000013076 transcript:EMLSAT00000013076 description:"snap_masked-LSalAtl2s9-processed-gene-8.14") HSP 1 Score: 107.457 bits (267), Expect = 8.578e-27 Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEP--EYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQE 157 M+Y+RG DYD W +GNEGW +SDVLP+F+ EN +G ++E ++HG GP+ + L F+ AG G + D N +Q G + T ++G+R +++ AYL+P NL + +HV +++++ +KA G++ I GK H +E Sbjct: 92 MIYMRGNRHDYDHWALLGNEGWSFSDVLPFFRKLENVKGTDLEKDVQFHGTEGPMKIEYGSQVTPLQKGFLNAGKLLGYPIS-DPNSYNQFGFSKILFTIKDGQRWTSSDAYLHPE--NPNLKVSINSHVLKIIIKHKKAMGIDMIKNGKIHRIYAKKE 247
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000006921 (supercontig:LSalAtl2s:LSalAtl2s391:573638:588537:1 gene:EMLSAG00000006921 transcript:EMLSAT00000006921 description:"maker-LSalAtl2s391-snap-gene-5.42") HSP 1 Score: 65.855 bits (159), Expect = 5.595e-12 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 100 EGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGE--KATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGA---KYLLTQNGIGTSNA 246 +G+R S AYL P R+NL ++ V ++ + + ++ + + GKT +++IL GAI +P+LL SG+G ++ K+ VT ++P VG L DHL + +K T S L +L+ KYLL + GI +++A Sbjct: 159 KGKRFSNFDAYLKPVLNRKNLHVLINTEVIKIDFKDKSPESLHITHQKEGKTIKLNKIKKLILAGGAINTPKLLFESGVGPKDQINKLNVTLVEDIP-VGNELQDHLTCPLYFHLKNDT----GSVNLANLINPQEIWKYLLHKEGIYSTSA 305
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558889|sp|Q9WWW2.1|ALKJ_PSEPU (RecName: Full=Alcohol dehydrogenase [acceptor]) HSP 1 Score: 389.037 bits (998), Expect = 6.552e-130 Identity = 211/442 (47.74%), Postives = 275/442 (62.22%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQ--EVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSA----SKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 MVYIRG EDY W G E WG+ FK E+NQ + + YHG G L VSD + N LS FV+AG A ++ N DFNGA Q GVG YQVTQ+ G+R S+A A+L+ R NL IIT+AH T+VL E KA GV YI KT EVIL GA+ +PQLLMLSG+GAA+EL++ G+ +LP VGKNL DHL+++++ + T + A +GL L + Y+ + G TSN AESGGF +S + RP++Q HF+P + G K +G TLH C+L P G I L SANP+D PLID +L ++ M G+KI R IF + AK K E PG +T+ +E+ +R AET YHPVGTC+MG D SVVD L+VRG++ +RV+DASIMP L++GNTNAPT+MIAE AA +I+ Sbjct: 91 MVYIRGHEEDYQAWEQAGGEYWGWKRAFALFKKLEHNQRFD-KSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFEDRKAVGVSYIQKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLDITLMCAANSRTPIGVAFSFIPRGLVGLFS---YIFKRKGFLTSNVAESGGFVKSSPERDRPNLQFHFLPTYLKDHGRKIAVGYGYTLHICDLLPKSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPGPAVTSDDEIVADIRSRAETIYHPVGTCRMGKDPASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNAPTIMIAENAAEIIV 528
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|416604|sp|Q00593.1|ALKJ_PSEOL (RecName: Full=Alcohol dehydrogenase [acceptor]) HSP 1 Score: 382.874 bits (982), Expect = 1.885e-127 Identity = 207/442 (46.83%), Postives = 274/442 (61.99%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQ--EVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVL--ASIKEP--TSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 MVYIRG +DY W WG+ L FK E NQ + + E+HG G L VSD +Y N LS FV+AG A + N DFNG Q GVG YQVTQ+ G+R S+A A+L+ R NL IIT AH +++L E KA GV YI H KT EV+L GA+ +P LLMLSG+GAA+EL++ GV+ +LP VGKNL DHL+++++ A+ +EP +L +G+ L + Y+ + G TSN AESGGF +S + RP++Q HF+P + G K +G TLH C+L P G I L SANPL PLID +L ++ M G+KI R I + AK K E PG + T +E+ + +RR AET YHPVGTC+MG D SVVD L++RG+ +RV+DASIMP L++GNTNAPT+MIAE AA +I+ Sbjct: 91 MVYIRGHEDDYHAWEQAAGRYWGWYRALELFKRLECNQRFD-KSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGEYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDRKAVGVSYIKKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQDHLDITLMCAANSREPIGVALSFIPRGVSGLFS---YVFKREGFLTSNVAESGGFVKSSPDRDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLLPKSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKHFKHEVVPGQAVKTDDEIIEDIRRRAETIYHPVGTCRMGKDPASVVDPCLKIRGLANIRVVDASIMPHLVAGNTNAPTIMIAENAAEIIM 528
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|81885843|sp|Q6UPE0.1|CHDH_RAT (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 375.555 bits (963), Expect = 5.666e-124 Identity = 199/438 (45.43%), Postives = 268/438 (61.19%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQ-GANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 MVYIRG EDY+ W G EGW Y+ LP+F+ ++ ++ GAN+ Y G GPL VS + + L F++A AG D NG Q G G +T +G+R S A AYL PA R NL Q V+RVL EG +A GVEYI G++H A ++EVIL GAI SPQLLMLSG+G A +L+K+G+ LPGVG+NL DHL + + + +P +L+SA K L + G ++L G G + E+GGF S PDIQ HF+P V G K + +H +R T VG ++L S NP D P+I+ +L T+ ++ R+ +K+ REIFA AFA E PG+ + + +E++ +VR A++ YHP TCKMG SD +VVDQQ RV GV+ LRVIDASIMP ++SGN NAPT+MIAEKAA +I Sbjct: 142 MVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKHELGANM---YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVI 576
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558900|sp|Q8BJ64.1|CHDH_MOUSE (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 365.155 bits (936), Expect = 4.410e-120 Identity = 194/438 (44.29%), Postives = 265/438 (60.50%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQ-GANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 MVYIRG EDY+ W G EGW Y+ LP+F+ ++ ++ GAN+ Y G GPL VS + + L F++A AG D NG Q G G +T +G+R S A AYL+P R NL Q V+RVL EG +A GVEYI G+ H A ++EVIL GAI SPQLLMLSG+G A +L K+ + LPGVG+NL DHL + V + +P +L+SA K L + G ++L + G G + E+GGF S PDIQ HF+P V G K + +H +R T VG ++L SANP D P+I +L T+ ++ R+ ++++REIFA A A E PG+ + + +E++ +VR A++ YHP TCKMG SD +VVD Q +V GV+ LRV+DASIMP ++SGN NAPT+MIAEKAA +I Sbjct: 139 MVYIRGHAEDYNRWHREGAEGWDYAHCLPYFRKAQRHELGANM---YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPSVVSGNLNAPTVMIAEKAADII 573
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|229462828|sp|Q8NE62.2|CHDH_HUMAN (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 362.844 bits (930), Expect = 3.525e-119 Identity = 196/438 (44.75%), Postives = 264/438 (60.27%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQ-GANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 MVY+RG EDY+ W+ G GW Y+ LP+F+ ++ ++ GA+ Y G GPL VS + + L F+EA AG D NG Q G G +T EG+R SAA AYL+PA R NL + V+RVL EG +A GVEY+ G++H A ++EVIL GAI SPQLLMLSGIG A +L+K+G+ LPGVG+NL DHL + + + P +L+SA K L + G ++L G G + E+GGF S PDIQ HF+P V G + +H +R T VG ++L SANP D P+I +L T+ ++ R +K+ REIFA A A E PG+ I + +E++ +VR A++ YHP TCKMG SD +VVD Q RV GV+ LRV+DASIMP ++SGN NAPT+MIAEKAA +I Sbjct: 137 MVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGHELGAS---RYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPGVPHPDIQFHFLPSQVIDHGRVPTQQEAYQVHVGPMRGTSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQPGSHIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAADII 571
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|81693315|sp|Q6D6D9.1|BETA_PECAS (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 348.206 bits (892), Expect = 6.060e-114 Identity = 189/439 (43.05%), Postives = 258/439 (58.77%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDM-GNEGWGYSDVLPWFKHSENNQ-GANIEPEYHGNSGPLTVSDRRY-TNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVT-QREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 M YIRG D+D W M G E W Y D LP+F+ +E GAN +YHG SGP++V+ + N L VEAG AG R D NG Q G G T +GRR S A YL+ AK R+NL+I+T A R+L +G++A GV Y G AK +EV+LCAGAI SPQ+L SG+G L+++ ++ +LPGVG+NL DHL + + + KEP SLY A + GA++L GIG SN E+GGF S P+IQ HF+P+ + G V HG H ++R G +++ S + + P I ++ T+ + R+ ++I REI A A K E +PG + T EEL++++R HAET +HP +CKMG D SVVD Q V G++GLRV+DASIMP++I+GN NA T+MIAEK A I Sbjct: 94 MCYIRGNAMDFDHWATMSGLEDWSYLDCLPYFRKAETRDVGAN---DYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDGKRAVGVAYFKGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHDLPGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGIGASNQFEAGGFIRSRDEFTWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKYRGREISPGLAVQTDEELDEFIRTHAETAFHPSCSCKMGEDDMSVVDGQGCVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRI 529
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|75499879|sp|Q47944.1|SDH_GLUOY (RecName: Full=L-sorbose 1-dehydrogenase; Short=SDH) HSP 1 Score: 346.665 bits (888), Expect = 1.063e-113 Identity = 181/436 (41.51%), Postives = 258/436 (59.17%), Query Frame = 0 Query: 2 VYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDR--HGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 V+ RG D+D W G +GW + DV +F SE N A +HG +GPL VS+ N S FV++ GL N DFNGASQ G G YQ+T R RRCS AV YL PA GR+NL+++T+A V +++ G +ATGV+YI G + A+ +QE+++ AGAI +P+L+MLSG+G A+ L + G+ +LPGVG+NL DH + ++A +K S K L G +Y + ++G SN E G F+ S S G PD+Q HF+ G+ V + GITL++ LRP G +RL SA+P P++D FL +L EG++++ E+F+ + K I+ K T + Y R H T YHP TCKMG D SVVD +L+V G++G+R+ D+S+MP L+ NTNA T+MI+E+AA I Sbjct: 94 VFTRGHPSDFDRWAAEGADGWSFRDVQKYFIRSEGN--AVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFNGTRATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDHFGVDIVAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVASNVVEGGAFWYSDPSSGVPDLQFHFLAEAGAEAGVTSVPKGASGITLNSYVLRPKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHIRKTCFFSGKQPTMQMYRDYAREHGRTSYHPTCTCKMGRDDMSVVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMISERAADFI 527
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|259585541|sp|C6DKY4.1|BETA_PECCP (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 346.28 bits (887), Expect = 3.875e-113 Identity = 186/439 (42.37%), Postives = 259/439 (59.00%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDM-GNEGWGYSDVLPWFKHSENNQ-GANIEPEYHGNSGPLTVSDRRY-TNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVT-QREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 M YIRG D+D W M G E W Y D LP+F+ +E G+N +YHG +GP++V+ + N L VEAG AG R D NG Q G G T +GRR S A YL+ AKGR+NL+I+T A ++L EG++A GV Y G + +EV+LCAGAI SPQ+L SG+G L+ + + +LPGVG+NL DHL + + + KEP SLY A + GA++L + GIG SN E+GGF S P+IQ HF+P+ + G V HG H ++R G +++ S + + P I ++ T+ + R+ ++I REI A A K E +PG ++ T EEL++++R HAET +HP +CKMG D +VVD Q RV G++GLRV+DASIMP++I+GN NA T+MIAEK A I Sbjct: 94 MCYIRGNAMDFDNWATMPGLEDWSYLDCLPYFRKAETRDVGSN---DYHGATGPVSVATPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFEGKRAVGVAYFKGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIPVVHDLPGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEWLFSGTGIGASNQFEAGGFIRSRDEFAWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKYRGREISPGLEVQTDEELDEFIRTHAETAFHPSCSCKMGEDEMAVVDGQGRVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRI 529
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|122056594|sp|Q48CM7.1|BETA_PSE14 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 342.428 bits (877), Expect = 1.419e-111 Identity = 188/441 (42.63%), Postives = 257/441 (58.28%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEW-RDMGNEGWGYSDVLPWFKHSENNQGANIEP-EYHGNSGPLTVSDRRY-TNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVT-QREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICG-GKTHI-AKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 M YIRG DYD W ++ G E W Y D LP+F+ +E +I P +YHG GP++V+ + N L VEAG AG R D NG Q G G T GRR S A YL+ AK R L+I+T A R+L EG++A GV Y+ G T I A+ +EV+LC GAI SPQ+L SG+G A L K+ + +LPGVG+NL DHL + + + +P SLY + K GAK++ GIG SN E+GGF S + P+IQ HF+P+ + G KGV HG H ++R G +++ S +P + P I ++ ++ + R+G+++ REI A E +PG + + E L+Q+VR HAET YHP +CKMG+D +VVD Q RV G+Q LRV+DASIMP + +GN NAPT+MIAEK A I Sbjct: 98 MCYIRGNAMDYDGWAKEPGLEDWSYLDCLPYFRKAETR---DIGPNDYHGGEGPVSVTKPKAGNNPLFHAMVEAGVQAGFPRTDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEGKRAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLPGVGQNLQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAKWMFLGTGIGASNQFEAGGFIRSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHVGSMRSPSRGRVQVKSKDPREYPSILFNYMSSEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 535
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558861|sp|Q88AE7.1|BETA_PSESM (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 342.428 bits (877), Expect = 1.761e-111 Identity = 188/441 (42.63%), Postives = 257/441 (58.28%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEW-RDMGNEGWGYSDVLPWFKHSENNQGANIEP-EYHGNSGPLTVSDRRY-TNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVT-QREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICG-GKTHI-AKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 M YIRG DYD W ++ G E W Y D LP+F+ +E +I P +YHG GP++V+ + N L VEAG AG R D NG Q G G T +GRR S A YL+ AK R+ LSI+T A R+L EG++A GV Y+ G T I + +EV+LC GAI SPQ+L SG+G A L K+ + +LPGVG+NL DHL + + + +P SLY + K GA+++ GIG SN E+GGF S + P+IQ HF+P+ + G KGV HG H ++R G + + S +P + P I ++ +D + R+G+++ REI A E +PG + + E L+Q+VR HAET YHP +CKMG+D +VVD Q RV G+Q LRV+DASIMP + +GN NAPT+MIAEK A I Sbjct: 98 MCYIRGNAMDYDGWAKEPGLEDWSYLDCLPYFRKAETR---DIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPRTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDEAKKRDTLSIVTHALTDRILFEGKRAVGVAYLVGDSDTRIEVRARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLPGVGQNLQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTGIGASNQFEAGGFIRSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHVGSMRSPSRGRVHVKSKDPREYPSILFNYMASDQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGMQNLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 535
BLAST of choline dehydrogenase vs. nr
Match: gi|1175983297|gb|OQW92894.1| (GMC family oxidoreductase [Beggiatoa sp. IS2]) HSP 1 Score: 447.203 bits (1149), Expect = 1.726e-150 Identity = 227/439 (51.71%), Postives = 301/439 (68.56%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSEN-NQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKG-RPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMILA 437 M Y RGQ EDYD+W +GN GW Y +VLP+FK +EN +GA+ EYHG GPL V D Y N LS LF+EA + G RN DF+GA Q G+G YQVTQ+ G+RCSAAVAYLNP K R NL+I+T++ +VL EG++A GVEY G + A ++EVIL GAI SP +L+LSGIG A +L+KVG+ +LPGVGKNL DHL+ L +P + Y + + L + G +Y L + G GTSN AE+GGF SPL+K RPD+Q HF+ L+ G ++ +G+T+HAC+LRP GE+ L SA P D +I +L TD ++A+M G+K+AREIF +F + E PG + T E + ++RR AET YHPVGTCKMG+D ++VVD +L+VRG++ LRV+DASIMP L+SGNTNAP +MIAEKAA ++ A Sbjct: 91 MCYTRGQAEDYDQWAALGNPGWSYHEVLPYFKKAENCERGAS---EYHGVGGPLNVQDLLYKNPLSGLFIEAAASLGYPRNDDFSGAKQEGIGYYQVTQKNGQRCSAAVAYLNPIKNRPNLTILTKSLAHKVLFEGKRAIGVEYSRGRQITRALADKEVILSGGAINSPHVLLLSGIGPADQLKKVGIPVLQDLPGVGKNLQDHLDACTLYQCVKPIT-YDSIRYLKEIPVGIQYYLFRKGPGTSNIAEAGGFVRSPLAKDTRPDVQFHFLSALLDDHGRNRINDNGMTIHACDLRPESRGELLLKSARPDDKVVIYANYLSTDKDMAMMVAGVKMAREIFHEPSFNPYLGKELFPGAQANTDEAIRDFIRRKAETIYHPVGTCKMGTDDQAVVDPELKVRGIEHLRVVDASIMPTLLSGNTNAPAIMIAEKAADLMKA 525
BLAST of choline dehydrogenase vs. nr
Match: gi|837880080|ref|WP_047885691.1| (choline dehydrogenase [Photobacterium ganghwense] >gi|836452640|gb|KLV08765.1| GMC family oxidoreductase [Photobacterium ganghwense]) HSP 1 Score: 441.039 bits (1133), Expect = 6.802e-148 Identity = 238/442 (53.85%), Postives = 290/442 (65.61%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAK----YLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIK--GVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M YIRG +DYDEW GN GWG++DVLP+FK SEN Q E +YHG GPL VSD R N LS+ F++A AG NHDFNGASQ G+G YQVTQR G+RCS+AVAYL PA+ R NL++IT A VTRVL E KA G+ Y GKT ++EV+L GAI SPQLLMLSGIG SEL VG+ + LPGVGKNL DHL+ VLA +E T YS +L+ K YLL + G T+N AE+GGF +S + +PDIQ HF P + G+ RHG +LHACNLRP G + L + +P P I +L ++ VM +GLK++REI + AF + E PG E L ++RR AE+ YHPVGTCKMG DS +VVD++LRVRG+ GLRVIDASIMP LI GNTNAPT+MIAEKAA MIL Sbjct: 91 MCYIRGHADDYDEWAAQGNAGWGFADVLPYFKRSENQQRG--EDDYHGADGPLNVSDLRIRNPLSEAFLQAAQQAGHPINHDFNGASQEGIGFYQVTQRNGQRCSSAVAYLRPAEQRTNLTVITDALVTRVLTEQGKAIGISYQKKGKTETLLASKEVLLSGGAINSPQLLMLSGIGEQSELSSVGIEPVLHLPGVGKNLQDHLD--VLAVTRERT-FYSVGFSPVALLRSVKGIVDYLLFRKGNFTTNIAEAGGFVKSDPTLDKPDIQFHFSPCFLDNHGLNLWQTVRHGYSLHACNLRPKSRGSLTLVNHDPAHPPKITPNYLSHPEDIRVMLQGLKLSREILSQQAFDRYRGKEVYPGCDAQDDEALLAFIRRKAESIYHPVGTCKMGQDSMAVVDERLRVRGMSGLRVIDASIMPTLIGGNTNAPTIMIAEKAADMIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1268754702|ref|WP_099018731.1| (choline dehydrogenase [Marinicella litoralis]) HSP 1 Score: 438.728 bits (1127), Expect = 3.346e-147 Identity = 218/437 (49.89%), Postives = 293/437 (67.05%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLS-KGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M Y RG +DYD W GN GWG DVLP+F SENNQ ++ E+H G L+VSD YTN LSD+F++A AG R DFNG Q G G YQVTQ+ G+R S A A+L PAKGR NL++ T+ +V+L+ +KATG+ GG+ K N+EVIL +GAI SPQLLMLSGIG + EL G+ Q ELPGVGKNL DHL++ ++ + + + ++ +++G KY L + G GTSN AE+GGF++SP++ RPD+Q HF+P ++ G + +G TLH C LRP GEI+L SANP D P I +L + +L +M EG KI R+IFA AF + DE PG+++ T EE+ ++R AE+ YHP+GTCKMGSD +VVDQ L+V G++GLRV+DAS MP L+SGNTNAPT+M+AEK + +I+ Sbjct: 93 MCYCRGHRKDYDHWEAQGNAGWGSKDVLPYFMKSENNQ--RLKNEFHSQDGLLSVSDHIYTNPLSDVFLDAAAEAGYQRTDDFNGLRQRGFGYYQVTQKNGQRHSTAEAFLKPAKGRSNLTVWTKTLAQKVILKDKKATGLLVKKGGQLQQLKANKEVILSSGAINSPQLLMLSGIGNSEELAHHGIQCQHELPGVGKNLQDHLDVCLVQHCSQDITYDTVNE----VLSGLKYYLFKKGPGTSNVAEAGGFWQSPMAIDDRPDLQFHFVPAMLDDHGRNRLKGNGYTLHMCVLRPESRGEIKLKSANPEDPPQIQANYLAVEHDLKIMVEGFKIQRKIFAAKAFDEFRDDEIFPGSEVQTDEEIIDFIRNKAESIYHPIGTCKMGSDDMAVVDQNLKVHGIEGLRVVDASAMPTLVSGNTNAPTIMMAEKISDVII 523
BLAST of choline dehydrogenase vs. nr
Match: gi|1131000642|ref|WP_075761958.1| (choline dehydrogenase [Photobacterium proteolyticum] >gi|1129683384|gb|OLQ81383.1| GMC family oxidoreductase [Photobacterium proteolyticum]) HSP 1 Score: 427.943 bits (1099), Expect = 9.474e-143 Identity = 223/442 (50.45%), Postives = 287/442 (64.93%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAK----YLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIK--GVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M YIRG DYDEW GNEGW Y +VLP+FK S++ + YHG+ GPL VSD R N LS+ F++A AG DFNGA Q GVG YQVTQ+ G+RCS AV YL PA+ R+NL++IT A TRVL EG KATG+EY G TH + + EV+L GAI SPQLL+LSG+G +L++ + +LPGVG+N+ DHL+ VLA +E T YS +L+ K Y+L + G TSN AE+GGF +S + PD+Q HF P + G+ RHG +LHACNLRP G + L ++P P+I +L + ++AVM +G+K++REI AF +E PG ++ T EEL ++RR AE+ YHPVGTCKMG D +VVD +L+VRGV GLRV+DASIMP LI GNTNAPT+MIAEKAA MIL Sbjct: 91 MCYIRGHACDYDEWASFGNEGWSYKEVLPYFKKSQHQERGG--DAYHGSHGPLNVSDLRIKNPLSEAFIKAAKQAGHRYTEDFNGADQEGVGYYQVTQKNGQRCSTAVGYLRPAEERDNLTVITDALTTRVLFEGTKATGIEYRKEGTTHTLRCSGEVLLSGGAINSPQLLLLSGVGKKEQLDQHDIPVVCDLPGVGENMQDHLD--VLAVTRERT-FYSVGFSPVALLRSIKGIFDYILFRKGNFTSNIAEAGGFVKSSPEQAVPDVQFHFSPCFLDNHGLNLWQTVRHGYSLHACNLRPKSRGRLMLRDSDPATPPVIQANYLDNEEDIAVMVKGIKLSREILKQPAFDHYRGEEVFPGKEVQTDEELEAFIRRKAESIYHPVGTCKMGQDEMAVVDPRLKVRGVSGLRVVDASIMPTLIGGNTNAPTIMIAEKAADMIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1365887642|gb|PSH57039.1| (alanine-phosphoribitol ligase [Phyllobacterium endophyticum]) HSP 1 Score: 427.557 bits (1098), Expect = 1.085e-142 Identity = 218/435 (50.11%), Postives = 284/435 (65.29%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMI 435 MVYIRG DYD+WRD+GNEGWGY D+LP+F+ SE+N+ +YHG G L VSD+R L+ +++ A AG N DFNGA Q GVG YQVTQR RR S+A A++ P R NL++ TQA V +V +E +A GV+ G + EVILCAGAI SP++L+LSG+G + L+K GV + +LPGVGKNL DHL++ AS++EP S KGL +L ++L G TSN E GGF + + PDIQ+HF+P V G V HG+TL+ LRP GE+ LASANP D P+ID +++ + A G KIAREIFA AF+KL K EH PG+ ++E+L YVR+ ++T++HP GTCKMGSD +VVD L VRG+ GLRVIDASIMP L+SGNTNAP++MI E+ A I Sbjct: 94 MVYIRGNRRDYDQWRDLGNEGWGYDDLLPYFRKSEDNE--RYIDDYHGQGGLLGVSDQRSPIDLTRVYLRAAQQAGYPYNTDFNGAQQYGVGYYQVTQRAVRRSSSAQAFIYPFSDRRNLTVQTQARVLKVHVEKGRAVGVDVAVNGNVNRIAAGSEVILCAGAINSPKILLLSGVGPSGALKKAGVEVRHDLPGVGKNLQDHLDVYCCASLREPVSYNGHDKGLMALWHATQFLAFGTGAVTSNVCEGGGFVSTDGNTDWPDIQMHFLPAYVIDHGRVKVRGHGMTLNTAYLRPESRGEVSLASANPADEPIIDPKYMTHQNDWAHTINGFKIAREIFAQPAFSKLYKSEHLPGSASASEEDLRAYVRQWSKTDFHPAGTCKMGSDDLAVVDPNLNVRGIDGLRVIDASIMPTLVSGNTNAPSIMIGERGADAI 526
BLAST of choline dehydrogenase vs. nr
Match: gi|837857256|ref|WP_047877891.1| (choline dehydrogenase [Photobacterium aquae] >gi|836450895|gb|KLV07040.1| GMC family oxidoreductase [Photobacterium aquae]) HSP 1 Score: 426.402 bits (1095), Expect = 3.849e-142 Identity = 226/448 (50.45%), Postives = 291/448 (64.96%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSE-NNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKE---------PTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIK--GVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M YIRG DYDEW +GN GWGY DVLP+F+ SE +GA+ YHG G L+VSD R N LS+ F++AG AG + DFNG SQ GVG YQVTQR G+RCS+AVAYL PA+ R NL++IT A TR+L++G++A GVEY G+ K ++EV+L GAI SPQLLMLSGIG EL K+G+ + LPGVGKNL DHL+ VLA +E P ++ A KG+ YLL + G T+N AE+GGF + +PD+Q HF P + G+ RHG +LHACNLRP G + L S +P D P+I +LQ ++ VM + +K++R I AF + DE PG ++ + EEL ++RR AE+ YHPVGTCKMG+D +VVD L+V GV+GLRV+DASIMP L+ GNTNAPT+MI EKAA MIL Sbjct: 91 MCYIRGHASDYDEWESLGNLGWGYQDVLPYFRKSEAQERGADT---YHGTEGFLSVSDLRIRNPLSEAFIKAGKQAGHHYSIDFNGESQDGVGFYQVTQRNGQRCSSAVAYLRPAESRPNLTVITGALTTRILMDGDRAVGVEYREQGEVKSVKASREVLLAGGAINSPQLLMLSGIGDQEELIKLGIEVKHHLPGVGKNLQDHLD--VLAVTRERTFHSVGFSPVAMLRALKGI------VDYLLFKKGNFTTNVAEAGGFARTEPELDKPDVQFHFSPCFLDNHGLNLWQTVRHGYSLHACNLRPKSRGHLTLRSTDPNDPPVIVANYLQHPDDIEVMLKAIKLSRNILKQPAFDRYRGDEVYPGKEVQSDEELRAFIRRKAESIYHPVGTCKMGTDGMAVVDASLKVYGVKGLRVVDASIMPTLVGGNTNAPTIMIGEKAADMIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|780041133|ref|WP_045448190.1| (choline dehydrogenase [Tepidicaulis marinus] >gi|665494128|dbj|GAK46046.1| choline dehydrogenase [Tepidicaulis marinus]) HSP 1 Score: 425.631 bits (1093), Expect = 7.455e-142 Identity = 217/437 (49.66%), Postives = 279/437 (63.84%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYS-ASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M+YIRG DYD WR MG EGWG+SDVLP+F+ SE N+ N +HG GPL VS+ R N L D FVEAG AG DFNG Q GVG YQ T + G+RCSAA YL PA GR NL++ +A +R+L EG KA GVEY+ +T A + EVILC GAI SPQ LMLSGIG A L K G+ +LPGVG+NL DHL+ +V+ EP +L+S S L L+TG +Y+ ++G+GTSN ESGGF ++ PD+Q+HF+ + DRH T H C LRP G I L S +P APLI +L+ + + VMREG+K+ REI A A E PG + T E+++ ++R AET YHPVGT KMG D+ +VVD++ RV G++ LRV+DAS+MP L+ GNTNAPT+MIAEK + +L Sbjct: 93 MIYIRGHARDYDMWRQMGLEGWGFSDVLPYFRRSEGNENGN--DTFHGGDGPLGVSNGRSPNVLFDAFVEAGKQAGHPYTDDFNGPQQEGVGPYQHTIKNGQRCSAAKGYLVPALGRPNLTVEVEALTSRILFEGNKAVGVEYVQKKQTQKAYADAEVILCGGAINSPQTLMLSGIGKADYLRKFGIDVVADLPGVGQNLQDHLDCTVIQECPEPVTLHSQVSNPLKQLMTGMQYVFFKSGVGTSNGLESGGFLKTRKELEVPDVQIHFVAAFMRDHARIKSDRHAYTTHICQLRPESRGFIGLKSVDPSQAPLIQPNYLEAEADRIVMREGVKMVREILAQKAMDPYRGAEFWPGEDVKTDEQIDAWIRETAETIYHPVGTAKMGKDNMAVVDERCRVHGLENLRVVDASVMPTLVGGNTNAPTIMIAEKISDDML 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1308629335|gb|PKM15353.1| (GMC family oxidoreductase [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-2]) HSP 1 Score: 422.935 bits (1086), Expect = 6.331e-141 Identity = 223/444 (50.23%), Postives = 290/444 (65.32%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENN-QGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAK-TNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKG-RPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDG---NLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M YIRG DYDEW +G GW + VLPWFKHSE+N +GA+ HG+ GPL VSD RYTN +S +F++A AG ++DFN Q G G YQVTQR G RCSAA AYL P + R NL +IT+A TR++ EG++ +GV Y G+ + ++EVIL GAI SPQLLMLSGIG A EL ++G+ + LPGVG NL DHL++ L +P + Y + + +YL T++G GTSN AESGGF + L++ RPD+Q HF+P + G + G TLHAC LRP G + L S NPLDA I+ +L TD +L ++ EG++++REIFA AF DE PG E L Q++R AET YHPVGTC+MG D+++VVD +LRVRGV GLRV+DAS+MPKLI GNTNAPT+MIAE+AA +I+ Sbjct: 91 MCYIRGHARDYDEWEQLGATGWNWDAVLPWFKHSESNSRGAD---ALHGSDGPLAVSDLRYTNPVSQVFLDAAREAGFPASNDFNSLDQEGFGWYQVTQRNGARCSAATAYLRPVRARPNLRVITRATATRLVYEGDRVSGVAYSVAGRGIFCEGASREVILSGGAINSPQLLMLSGIGPADELRRLGIEPRTNLPGVGANLQDHLDICTLHKCTQPVT-YDHTN---DVSIALQYLFTRSGPGTSNIAESGGFLRTRLAEDERPDLQFHFVPAQLDDHGRHRLPGDGFTLHACALRPRSRGRLLLQSNNPLDALRIEPEYL-TDSEGYDLKMLLEGVRVSREIFAQPAFDAYRGDEIFPGEDAVDDERLTQFIRDKAETIYHPVGTCRMGRSDDAQAVVDPELRVRGVDGLRVVDASVMPKLIGGNTNAPTIMIAERAADLII 526
BLAST of choline dehydrogenase vs. nr
Match: gi|1278198279|gb|PIX61745.1| (GMC family oxidoreductase, partial [Xanthomonadales bacterium CG_4_10_14_3_um_filter_64_11]) HSP 1 Score: 420.624 bits (1080), Expect = 1.105e-140 Identity = 220/444 (49.55%), Postives = 295/444 (66.44%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENN-QGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTHIAK-TNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKG-RPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDG---NLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMG--SDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMIL 436 M YIRG DYDEW +G GW ++ VLPWFK SE+N +G ++ HG GPL VSD RYTN LS +F++A AGL ++DFNGA+Q G G YQVTQR G RCSAA AYL+P + R NL +IT+A TR++ EG++ +GV Y G+ + ++EVIL GAI SPQLLMLSGIG A +L ++G+ +++LPGVG NL+DHL++ L +P + + +L +YL + G GTSN AE+GGF S L++ RPD+Q HF+P + G + G TLHAC LRP G + L S+NPLD I+ +L TD +L ++ EG++++REIFA AF DE PG + + L Q++R AET YHPVGTC+MG D ++VVD +LRVRG+ GLRV+DAS+MPKLI GNTNAPTMMIAE+AA +++ Sbjct: 43 MCYIRGHAGDYDEWEQLGASGWNWNAVLPWFKASESNSRGGDV---LHGGDGPLAVSDLRYTNPLSQVFLDATGEAGLPASNDFNGATQEGFGWYQVTQRNGSRCSAATAYLDPVRARPNLRVITRATATRLVYEGDRVSGVAYSVAGRGIFCEGASREVILSGGAINSPQLLMLSGIGPADQLRRLGIDLRVDLPGVGANLHDHLDVCTLRKCTQPITYDHTNDAWIAL----QYLFARRGPGTSNIAEAGGFLRSRLAEDERPDLQFHFVPAQLDDHGRHRLPGDGFTLHACALRPRSRGRLLLQSSNPLDPLRIEPEYL-TDSEGYDLKMLLEGVRLSREIFAQPAFDAYRGDELFPGEEAVDETHLIQFIRDKAETIYHPVGTCRMGGSDDPQAVVDPELRVRGIAGLRVVDASVMPKLIGGNTNAPTMMIAERAADLMV 478
BLAST of choline dehydrogenase vs. nr
Match: gi|1039940344|ref|WP_065010947.1| (MULTISPECIES: choline dehydrogenase [Mesorhizobium] >gi|1039246732|gb|OBQ87017.1| alanine-phosphoribitol ligase [Mesorhizobium sp. AA22] >gi|1241693129|gb|PBB52987.1| choline dehydrogenase [Mesorhizobium loti]) HSP 1 Score: 421.394 bits (1082), Expect = 2.360e-140 Identity = 219/440 (49.77%), Postives = 290/440 (65.91%), Query Frame = 0 Query: 1 MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNSGPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQREGRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKT--HIAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNLYDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESGGFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGEIRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKDEHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRGVQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMILAG 438 MVYIRG DYD+W +GNEGWGY LP+F +E+NQ + YHGN GPL VSD+ L+D+FV A AG N DFNGA Q G+G YQVTQR+ RR SAAV+Y++P + R NL++ITQA V RV++E +ATGVEY G +A +EV++ +GAI SP+LL+ SGIG A EL +G+ +L GVGKNL DHL++ +A++K+P S + L + G +YLL + G TSN E G F + + PD Q+HF+P V G K + G+TL+ LRP G ++LAS +PL APLID FL D +L K AREIFA SA +LI+ E+ PG + + ++ YVR ++T+YHPVGTCKMGSD +VVD QLRVRG++ LRVID+SIMP L+SGNTNAP++MI EK A+++LAG Sbjct: 90 MVYIRGNSNDYDQWAKLGNEGWGYDGCLPYFVRAESNQRFTLP--YHGNDGPLAVSDQVSPLPLTDIFVRAAQQAGHPFNPDFNGARQHGIGYYQVTQRDRRRGSAAVSYVHPVRHRANLTVITQARVLRVIVENGRATGVEYAVGSSRTPQVANAEREVVVSSGAIGSPRLLLSSGIGEADELSALGIKPVHDLKGVGKNLQDHLDVYAVATLKDPISYDGQDRLLPMIRNGLQYLLYRTGPVTSNVCEGGAFLSTDGNDDWPDNQMHFLPAYVVDHGRKKIVGSGMTLNTAYLRPDARGSVKLASNDPLKAPLIDPNFLGVDEDLRRSIACFKQAREIFAQSALDRLIEREYMPGKDLRSDAQIADYVREWSKTDYHPVGTCKMGSDDMAVVDTQLRVRGLERLRVIDSSIMPTLVSGNTNAPSIMIGEKGAAIMLAG 527 The following BLAST results are available for this feature:
BLAST of choline dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of choline dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of choline dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2_size2283618:41762..43081- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2_size2283618-processed-gene-0.24 ID=snap_masked-scaffold2_size2283618-processed-gene-0.24|Name=choline dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=1320bp|location=Sequence derived from alignment at scaffold2_size2283618:41762..43081- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'choline dehydrogenase' has the following synonyms
Add to Basket
|