steroid hormone receptor err2, snap_masked-scaffold394_size185225-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 112.464 bits (280), Expect = 7.560e-27 Identity = 100/389 (25.71%), Postives = 165/389 (42.42%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIF------TELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDM--------------VNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKP-KNLSIAITF---------QKHPATTDLIQKHDNLVSEVNGGL----REAGQNRADYVIVLLLAHIFMFSTD----FGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 C IC ++AGKH YYG Q C SCR FF+RSV+N Y +FSCC ++ C I ++RK+C+ CRFQKC+ AGM+ +VL DG ++ A+I + N L F T LEV +I L + + + +N + F+ + +F ++ + S++ + ++ S D L + N+P I V S C P+ID+++ + L L + +NL I F +P D + +LVS++N + +++ Y+I+ + +F TD G ++ E I Q Y+ +L RY Y ++ K + +ML Sbjct: 106 CQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLP-DGERRSKKSAMI----LNNNTPLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSMVIRNSDFLIDFVDYL------------AFPARSEYPYLRMAMSLEKIQFLSFISMGTSRSSLHFSQEDLYILYDINFPKI-NTFREVSSITTTNC-----------------PDIDELINSVHLLHLKNNETLQNLPSRIEFTIQHYILNHHLYPNENDNHSRFLHLVSQINSWVMNDENHTKKDKFSYIIMFFI--LFFDRTDSVTLSGVKFRDPELIDRAQLIYVQMLKRYFQRRYPRKSSKKFLKGIML 457
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 107.071 bits (266), Expect = 5.257e-25 Identity = 100/391 (25.58%), Postives = 172/391 (43.99%), Query Frame = 0 Query: 89 SEDLEEIFNKSTAVK--CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVI-----PIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKP-KNL--SIAITFQKHPATTDLI-QKHDN------LVSEVNGGLRE----AGQNRADYVIVLLLAHIFMFSTD----FGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 SED +I A+ C IC ++AGKH YYG Q C SCR FF+RSV+N Y +F CC ++ C I ++RK C+ CRFQKC+ AGM+ +V + + ++ + P+ + L T +EV +I NL + + ++ + F+ + +F ++ + S++ + LS M N + L+ +Y + + E N P+ID+++ + L L + +NL + T Q + DL ++DN LVS++N + + Q++ Y+I+L + +F TD G ++ E I Q Y+ +L RY Y ++ K + +ML Sbjct: 90 SEDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPLPSFNDPEGL----TSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYL------------AFPTRSEYPYLKMAMSLEKIQLLSLIS-MGTSNSSLHFSQEDLYVLYQINSPKINIFRELSSIKNPNF---PDIDELINSVRLLHLNNNETIQNLPSRVEFTLQHYLLNHDLCPNENDNYSTFLHLVSQINSWVMDDENVIKQDKFSYIIMLFI--LFFDRTDSVKISGVKFKDPEMIDRAQLAYVQMLKRYFQRKYPRKSSKKFLKGIML 458
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 85.1149 bits (209), Expect = 6.915e-18 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0 Query: 98 KSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSV-RNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAA 186 K T + C +C D A H +YG AC SCR FF+RSV ++ Y C Q C IT +RKNC++CR++KCL++GMK +VLS + ++ Sbjct: 85 KMTEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYF----CSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSS 170
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 80.4925 bits (197), Expect = 2.029e-16 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 102 VKCPICHDLAGKHFYYGVQACISCRGFFQRSVR-NKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVL 179 V C IC D A H +YG AC SCR FF+R+V N Y C + C IT +RK+C++CRF KCL+AGMK +V+ Sbjct: 61 VTCHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYH----CSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 77.411 bits (189), Expect = 2.233e-15 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKG----SQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLS 180 C IC D+A H +YG AC SCR FF R+V +F C +G S +C IT +R +C++CR++ CL AGM YV + Sbjct: 137 CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTT 217
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 74.7146 bits (182), Expect = 1.619e-14 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0 Query: 104 CPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 CP+C D ++G F+YG+ +C SC+GFF+R+V+NK + C +GSQ C +T +RK C CRF KCL GMK Sbjct: 155 CPVCGDKISG--FHYGIFSCESCKGFFKRTVQNK--KNYVCLRGSQ-CPVTISTRKKCPACRFDKCLNIGMK 221
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 74.7146 bits (182), Expect = 1.808e-14 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 80 GRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 G+S P+S + +EE+ CP+C D ++YG+ C SC+GFF+R+V+NK K C + C I RK C +CRFQKCL GMK Sbjct: 171 GQSDQPDSK-DGMEEL--------CPVCGDKVSG-YHYGLLTCESCKGFFKRTVQNK---KVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMK 252
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 69.3218 bits (168), Expect = 6.822e-13 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 C IC D A GKH YGV +C C+GFF+R+VR + C+ ++ C I R R C++CR+ KCL GMK Sbjct: 91 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKELTY---ACRENRDCVIDKRQRNRCQYCRYMKCLDTGMK 157
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 70.0922 bits (170), Expect = 7.227e-13 Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 C IC D A +YG+ C C+GFF+R+V+NK + C C I R C++CRFQKCLQ GM Sbjct: 283 CMICEDRATG-LHYGIITCEGCKGFFKRTVQNK---RIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 69.707 bits (169), Expect = 1.030e-12 Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 C +C D A G+H YG +C C+GFF+RS+R + + C+G++ C +T R C++CR QKCL GM+ Sbjct: 220 CVVCGDRASGRH--YGAISCEGCKGFFKRSIRKQLGYQ---CRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1718061|sp|P54779.1|USP_MANSE (RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear receptor subfamily 2 group B member 4) HSP 1 Score: 83.9593 bits (206), Expect = 4.636e-16 Identity = 91/342 (26.61%), Postives = 142/342 (41.52%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLI-QKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYL 436 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V AA T++A S EL +++ L I L + +EF F++V GV +S NKQ A + + I L D++ LI ++ +F + W Y D + ++RS P QLM P +T ++ A + Q D ++SE++ +R ++A+YV L I + + D + L+N+ + ++EK L Y+ Sbjct: 113 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLTY---ACREDRNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAA----------RGTEDAHPSSSVQELSIERLLEIES------------LVADPPEEF-QFLRVGPESGVPAKYRAPVSSLCQIGNKQIAALVVWARDIPHFGQLELEDQILLIKNSWNELLLFAIAWRSMEYLTD--------ERENVDSRSTAP-----------PQLMCLMP-----GMTLHRNSALQAGVGQIFDRVLSELSLKMRTLRMDQAEYVA---LKAIILLNPDV-KGLKNKPEVVVLREKMFSCLDEYV 398
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1209676900|sp|O95718.3|ERR2_HUMAN (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=ERR beta-2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 80.1073 bits (196), Expect = 7.118e-15 Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF L +GT +NG + SP + + + G P + +S + SG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 41 ASGGFGLALGTHANG--LDSPPMFAGAGLGGTPCR------KSYEDCASGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 168
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1345734|sp|P49700.1|USP_BOMMO (RecName: Full=Protein ultraspiracle homolog; AltName: Full=BmCF1; AltName: Full=Nuclear receptor subfamily 2 group B member 4; AltName: Full=RXR type hormone receptor CF1) HSP 1 Score: 80.1073 bits (196), Expect = 8.899e-15 Identity = 90/344 (26.16%), Postives = 141/344 (40.99%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYEN---RSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLI-QKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRY 435 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V AA R T++A S EL +++ L + + + E L ++V GV +S NKQ A I + I L D++ LI ++ +F + W EFL EN R+ P QL+ P +T ++ A + Q D ++SE++ +R ++A+ V L I + + D + L+N++ + ++EK + L Y Sbjct: 114 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLTYA---CREDKNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAARR----------TEDAHPSSSVQELSIERLLEL-------------EALVADSAEELQILRVGPESGVPAKYRAPVSSLCQIGNKQIAALIVWARDIPHFGQLEIDDQILLIKGSWNELLLFAIAWRSM-----------EFLNDERENVDSRNTAP-----------PQLICLMP-----GMTLHRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAECVA---LKAIILLNPDV-KGLKNKQEVDVLREKMFLCLDEY 398
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|18202151|sp|O76202.1|USP_CHOFU (RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear receptor subfamily 2 group B member 4) HSP 1 Score: 78.1814 bits (191), Expect = 3.335e-14 Identity = 88/341 (25.81%), Postives = 144/341 (42.23%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQK-HDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRY 435 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V A A+ P +S Q+ EL +++ L+ ++L++ + E F++V + V +S NKQ A + + I L D++ LI ++ +F + W Y E+ ++G RS QLM P +T ++ A + D ++SE++ +R ++A+YV L I + + D + L+NR+ + ++EK L Y Sbjct: 119 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLSY---ACREERNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRNARGAEDAHP-------SSSVQVSDELSIER-LTEMESLVA------------DPSEEFQFLRVGPDSNVPPRYRAPVSSLCQIGNKQIAALVVWARDIPHFGQLELDDQVVLIKASWNELLLFAIAWRSMEY-------LEDERENGDGTRST-----------TQPQLMCLMP-----GMTLHRNSAQQAGVGAIFDRVLSELSLKMRTLRMDQAEYVA---LKAIVLLNPDV-KGLKNRQEVDVLREKMFSCLDDY 407
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|119561|sp|P11475.1|ERR2_RAT (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 77.7962 bits (190), Expect = 4.158e-14 Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF + +GT +NG + SP + + + G P + +S + SG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 41 ASGGFGMALGTHANG--LDSPPMFAGAGLGGNPCR------KSYEDCTSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 168
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|7676156|sp|O00482.2|NR5A2_HUMAN (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Alpha-1-fetoprotein transcription factor; AltName: Full=B1-binding factor; Short=hB1F; AltName: Full=CYP7A promoter-binding factor; AltName: Full=Hepatocytic transcription factor; AltName: Full=Liver receptor homolog 1; Short=LRH-1) HSP 1 Score: 78.1814 bits (191), Expect = 4.566e-14 Identity = 54/151 (35.76%), Postives = 74/151 (49.01%), Query Frame = 0 Query: 44 NGIAMSSPGLDPSSSVSGVPTQ--MLFYPQQSVPEMGSGRSVG-----PE------------SSSEDLEEIFNKSTAVKCPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 +G+ GL P S +P + ++ P+ +G RS G PE S EDLEE+ CP+C D ++G H YG+ C SC+GFF+R+V+N K C +Q C+I RK C +CRFQKCL GMK Sbjct: 16 HGLTPIGAGL-PDRHGSPIPARGRLVMLPKVETEALGLARSHGEQGQMPENMQVSQFKMVNYSYDEDLEEL--------CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNN---KRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMK 152
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|3024414|sp|O19052.1|PPARG_RABIT (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.391e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 98 EEPSNSLMAIECRVCSDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 173
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431788|sp|O18924.1|PPARG_MACMU (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.655e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|75068622|sp|Q4U3Q4.1|PPARG_CANFA (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.714e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431782|sp|O62807.1|PPARG_PIG (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.755e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 127 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 202
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1325316701|ref|XP_023340074.1| (uncharacterized protein LOC111710243 [Eurytemora affinis]) HSP 1 Score: 88.5817 bits (218), Expect = 4.598e-15 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 94 EIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 E NKST + CP+C D+A HF+YG C SC+ FF+R V K+ C GS C ++ +R++C+ CR++KC+ AGMK VLS++ Sbjct: 265 ESANKST-IDCPVCKDVAIAHFHYGGMCCYSCKAFFRRVVNTSKANKYKCRNGSNLCDVSLGNRRSCQACRYRKCVSAGMKPGLVLSDE 352
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|884922568|ref|XP_013010817.1| (steroid hormone receptor ERR2 isoform X2 [Cavia porcellus]) HSP 1 Score: 88.1965 bits (217), Expect = 5.625e-15 Identity = 87/316 (27.53%), Postives = 142/316 (44.94%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM-KTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVD-QALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIEL 344 A GF L +GT +NG + SP + P S + G P + +S + GSG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM K L G + K + S S + L++ A ++S Y L ++ K + M + +I + I + I NLS D+M+L+ + I +L VY P Y++ L + E+ +D E ++ GL+EL Sbjct: 46 ASGGFGLALGTHANG--LDSPPMFPGSGLGGTPCR------KSYEDCGSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYK--------RRLDSESSPYLSLQISPPAKKPLTKIVS------YLLVAEPDKLYAMPPAGMPEGDIKALTILCDLVDRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEIL-ILGIVYRSLP-----YDDKLVYA-EDYIMDEEHSRLAGLLEL 325
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600364|gb|AID52843.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 88.5817 bits (218), Expect = 5.681e-15 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 102 VKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAK 190 V C +C D+A H +YG AC SCR FF+RSV N+ + + C + +C +T +RK+C+ CRF+KC+ GMK +V++ D RAK Sbjct: 58 VACSVCGDIANDHVHYGAIACYSCRAFFRRSVSNEAHYE---CSRNSKCPVTKETRKHCQSCRFKKCIDIGMKPSWVMTEDERKDNRAK 143
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|514466055|ref|XP_003472369.2| (steroid hormone receptor ERR2 isoform X1 [Cavia porcellus]) HSP 1 Score: 88.1965 bits (217), Expect = 5.856e-15 Identity = 87/316 (27.53%), Postives = 142/316 (44.94%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM-KTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVD-QALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIEL 344 A GF L +GT +NG + SP + P S + G P + +S + GSG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM K L G + K + S S + L++ A ++S Y L ++ K + M + +I + I + I NLS D+M+L+ + I +L VY P Y++ L + E+ +D E ++ GL+EL Sbjct: 62 ASGGFGLALGTHANG--LDSPPMFPGSGLGGTPCR------KSYEDCGSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYK--------RRLDSESSPYLSLQISPPAKKPLTKIVS------YLLVAEPDKLYAMPPAGMPEGDIKALTILCDLVDRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEIL-ILGIVYRSLP-----YDDKLVYA-EDYIMDEEHSRLAGLLEL 341
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|530722616|gb|AGT42223.1| (retinoid X receptor [Aurelia aurita]) HSP 1 Score: 87.4261 bits (215), Expect = 8.644e-15 Identity = 63/194 (32.47%), Postives = 91/194 (46.91%), Query Frame = 0 Query: 26 DPPNLAQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEM-GSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYV----LSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEV 213 D ++ V LP P I SP + + + F+PQ S P GS R + P C +C D A KH YGV AC C+GFF+RSVRN + C G+QRC I +SR C++CRFQKC++ GMK V L + +T+ KA P+ + +K + + + +E+ Sbjct: 31 DGSSMNMVDSCLPEPPPLESIDSYSPLSGSDGTPGSSSSSLSFFPQNSSPNSNGSERQMLP------------------CAVCSDKAYVKH--YGVVACEGCKGFFKRSVRNNRKYQ---CLGNQRCDIDRKSRNKCQYCRFQKCIEVGMKPEAVQDETLKKEKRESTKRKAANPVSSGSKGSPVEVTSSRVEM 201
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1229134242|ref|XP_022112223.1| (peroxisome proliferator-activated receptor gamma-like [Acanthaster planci] >gi|1229134244|ref|XP_022112224.1| peroxisome proliferator-activated receptor gamma-like [Acanthaster planci] >gi|1229134246|ref|XP_022112225.1| peroxisome proliferator-activated receptor gamma-like [Acanthaster planci]) HSP 1 Score: 87.0409 bits (214), Expect = 1.398e-14 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 0 Query: 86 ESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLF--SKNQKEFLSFIQVMNNE 252 + SS++ + FN S ++C IC D A +YGV +C C+GFF+R+ R K K ++ C IT +SR C++CRFQKCLQ GM T V A + K + + + +N LS+ TE E + L + + Y +Y + F K+ KE F +N E Sbjct: 57 DDSSDEANKTFNYSEIIRCQICGDKASG-MHYGVYSCEGCKGFFRRTQRMKLEYKPCPLWETKPCDITIKSRNKCQYCRFQKCLQLGMSTGAVRMGRVPRAEKEKLLHEMEHVRENLILSE--TEEEREHRLFVER-----VYENYARHFEGEKSDKEIEGFRMYVNQE 217
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600354|gb|AID52838.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 86.6557 bits (213), Expect = 2.932e-14 Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 0 Query: 48 MSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVR-NKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLS 180 +S G P S+++ + T SVPE G+S P+ V C +C D+A H +YG AC SCR FF+R V N Y C S+ C IT +RK+C++CRFQKC+ GM+ +V++ Sbjct: 17 LSHTGCSPGSALTSMMTS-----NTSVPEQAMGKSGKPKRKRPKFIR------KVVCKVCGDVANDHIHYGAIACYSCRAFFRRGVNANAPYY----CSQSKSCPITKHTRKHCQYCRFQKCMAIGMRASWVMT 135
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1351541326|ref|XP_024079835.1| (steroidogenic factor 1-like, partial [Terrapene mexicana triunguis]) HSP 1 Score: 78.1814 bits (191), Expect = 3.540e-14 Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 90 EDLEEIFNKSTAVKCPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 EDL+E+ CP+C D ++G H YG+ C SC+GFF+R+V+N K C SQ C+I RK C +CRFQKCL GM+ Sbjct: 7 EDLDEL--------CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNN---KHYTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMR 79
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|351701880|gb|EHB04799.1| (Steroid hormone receptor ERR2 [Heterocephalus glaber]) HSP 1 Score: 85.5001 bits (210), Expect = 3.708e-14 Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF L +GT +NG + SP + P + + G P + +S + GSG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 41 ASGGFGLALGTHANG--LDSPPMFPGAGLGGTPCR------KSYEDCGSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 168
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|512949518|ref|XP_004837205.1| (steroid hormone receptor ERR2 [Heterocephalus glaber]) HSP 1 Score: 85.8853 bits (211), Expect = 3.710e-14 Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF L +GT +NG + SP + P + + G P + +S + GSG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 62 ASGGFGLALGTHANG--LDSPPMFPGAGLGGTPCR------KSYEDCGSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 189 The following BLAST results are available for this feature:
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of steroid hormone receptor err2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of steroid hormone receptor err2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold394_size185225:107585..115947+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold394_size185225-processed-gene-0.7 ID=snap_masked-scaffold394_size185225-processed-gene-0.7|Name=steroid hormone receptor err2|organism=Tigriopus kingsejongensis|type=gene|length=8363bp|location=Sequence derived from alignment at scaffold394_size185225:107585..115947+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'steroid hormone receptor err2' has the following synonyms
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