steroid hormone receptor err2, snap_masked-scaffold394_size185225-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 112.464 bits (280), Expect = 7.560e-27 Identity = 100/389 (25.71%), Postives = 165/389 (42.42%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIF------TELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDM--------------VNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKP-KNLSIAITF---------QKHPATTDLIQKHDNLVSEVNGGL----REAGQNRADYVIVLLLAHIFMFSTD----FGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 C IC ++AGKH YYG Q C SCR FF+RSV+N Y +FSCC ++ C I ++RK+C+ CRFQKC+ AGM+ +VL DG ++ A+I + N L F T LEV +I L + + + +N + F+ + +F ++ + S++ + ++ S D L + N+P I V S C P+ID+++ + L L + +NL I F +P D + +LVS++N + +++ Y+I+ + +F TD G ++ E I Q Y+ +L RY Y ++ K + +ML Sbjct: 106 CQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLP-DGERRSKKSAMI----LNNNTPLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSMVIRNSDFLIDFVDYL------------AFPARSEYPYLRMAMSLEKIQFLSFISMGTSRSSLHFSQEDLYILYDINFPKI-NTFREVSSITTTNC-----------------PDIDELINSVHLLHLKNNETLQNLPSRIEFTIQHYILNHHLYPNENDNHSRFLHLVSQINSWVMNDENHTKKDKFSYIIMFFI--LFFDRTDSVTLSGVKFRDPELIDRAQLIYVQMLKRYFQRRYPRKSSKKFLKGIML 457
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 107.071 bits (266), Expect = 5.257e-25 Identity = 100/391 (25.58%), Postives = 172/391 (43.99%), Query Frame = 0 Query: 89 SEDLEEIFNKSTAVK--CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVI-----PIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKP-KNL--SIAITFQKHPATTDLI-QKHDN------LVSEVNGGLRE----AGQNRADYVIVLLLAHIFMFSTD----FGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 SED +I A+ C IC ++AGKH YYG Q C SCR FF+RSV+N Y +F CC ++ C I ++RK C+ CRFQKC+ AGM+ +V + + ++ + P+ + L T +EV +I NL + + ++ + F+ + +F ++ + S++ + LS M N + L+ +Y + + E N P+ID+++ + L L + +NL + T Q + DL ++DN LVS++N + + Q++ Y+I+L + +F TD G ++ E I Q Y+ +L RY Y ++ K + +ML Sbjct: 90 SEDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPLPSFNDPEGL----TSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYL------------AFPTRSEYPYLKMAMSLEKIQLLSLIS-MGTSNSSLHFSQEDLYVLYQINSPKINIFRELSSIKNPNF---PDIDELINSVRLLHLNNNETIQNLPSRVEFTLQHYLLNHDLCPNENDNYSTFLHLVSQINSWVMDDENVIKQDKFSYIIMLFI--LFFDRTDSVKISGVKFKDPEMIDRAQLAYVQMLKRYFQRKYPRKSSKKFLKGIML 458
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 85.1149 bits (209), Expect = 6.915e-18 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0 Query: 98 KSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSV-RNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAA 186 K T + C +C D A H +YG AC SCR FF+RSV ++ Y C Q C IT +RKNC++CR++KCL++GMK +VLS + ++ Sbjct: 85 KMTEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYF----CSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSS 170
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 80.4925 bits (197), Expect = 2.029e-16 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 102 VKCPICHDLAGKHFYYGVQACISCRGFFQRSVR-NKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVL 179 V C IC D A H +YG AC SCR FF+R+V N Y C + C IT +RK+C++CRF KCL+AGMK +V+ Sbjct: 61 VTCHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYH----CSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 77.411 bits (189), Expect = 2.233e-15 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKG----SQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLS 180 C IC D+A H +YG AC SCR FF R+V +F C +G S +C IT +R +C++CR++ CL AGM YV + Sbjct: 137 CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTT 217
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 74.7146 bits (182), Expect = 1.619e-14 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0 Query: 104 CPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 CP+C D ++G F+YG+ +C SC+GFF+R+V+NK + C +GSQ C +T +RK C CRF KCL GMK Sbjct: 155 CPVCGDKISG--FHYGIFSCESCKGFFKRTVQNK--KNYVCLRGSQ-CPVTISTRKKCPACRFDKCLNIGMK 221
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 74.7146 bits (182), Expect = 1.808e-14 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 80 GRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 G+S P+S + +EE+ CP+C D ++YG+ C SC+GFF+R+V+NK K C + C I RK C +CRFQKCL GMK Sbjct: 171 GQSDQPDSK-DGMEEL--------CPVCGDKVSG-YHYGLLTCESCKGFFKRTVQNK---KVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMK 252
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 69.3218 bits (168), Expect = 6.822e-13 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 C IC D A GKH YGV +C C+GFF+R+VR + C+ ++ C I R R C++CR+ KCL GMK Sbjct: 91 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKELTY---ACRENRDCVIDKRQRNRCQYCRYMKCLDTGMK 157
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 70.0922 bits (170), Expect = 7.227e-13 Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 C IC D A +YG+ C C+GFF+R+V+NK + C C I R C++CRFQKCLQ GM Sbjct: 283 CMICEDRATG-LHYGIITCEGCKGFFKRTVQNK---RIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 69.707 bits (169), Expect = 1.030e-12 Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 C +C D A G+H YG +C C+GFF+RS+R + + C+G++ C +T R C++CR QKCL GM+ Sbjct: 220 CVVCGDRASGRH--YGAISCEGCKGFFKRSIRKQLGYQ---CRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431789|sp|O18971.1|PPARG_BOVIN (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.774e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13432235|sp|P37238.3|PPARG_MOUSE (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.956e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13432234|sp|P37231.3|PPARG_HUMAN (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 7.018e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431783|sp|O88275.2|PPARG_RAT (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 7.206e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|3334187|sp|O42101.1|NR5A2_CHICK (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=FTF/LRH-1; AltName: Full=OR2.0) HSP 1 Score: 77.0258 bits (188), Expect = 8.429e-14 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 87 SSSEDLEEIFNKSTAVKCPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 S EDLEE+ CP+C D ++G H YG+ C SC+GFF+R+V+N K C +Q C+I RK C +CRFQKCL GMK Sbjct: 37 SYDEDLEEL--------CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNN---KRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMK 112
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431791|sp|P57797.1|PPARG_CRIGR (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.0258 bits (188), Expect = 9.699e-14 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R +K + CRI +SR C++CRFQKCL GM Sbjct: 98 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIR----LKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGM 173
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|49036491|sp|Q95L87.1|STF1_MACEU (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Nuclear receptor subfamily 5 group A member 1) HSP 1 Score: 76.6406 bits (187), Expect = 1.140e-13 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 0 Query: 87 SSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 S EDL+E+ CP+C D ++YG+ C SC+GFF+R+V+N K C SQ C+I RK C +CRFQKCL GM+ Sbjct: 4 SYDEDLDEL--------CPVCGDKVSG-YHYGLLTCESCKGFFKRTVQNN---KHYTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMR 79
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|45644987|sp|P33244.2|FTZF1_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=FTZ-F1 alpha; AltName: Full=Nuclear receptor subfamily 5 group A member 3) HSP 1 Score: 77.411 bits (189), Expect = 1.146e-13 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0 Query: 80 GRSVGPESSSE--DLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 G S P E D + +F + CP+C D ++YG+ C SC+GFF+R+V+NK K C + C I RK C +CRFQKCL+ GMK Sbjct: 486 GTSATPGHGGEVIDFKHLFEE----LCPVCGDKVSG-YHYGLLTCESCKGFFKRTVQNK---KVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMK 574
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|74902124|sp|Q5I7G2.1|RXR_LYMST (RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X receptor; Short=LymRXR) HSP 1 Score: 75.8702 bits (185), Expect = 1.670e-13 Identity = 59/183 (32.24%), Postives = 76/183 (41.53%), Query Frame = 0 Query: 42 PSNGIA-MSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKN-ASLSQIF-TELEVDQALSIY 220 PS G M SPG+ +S G P + P P G P SS T C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+ KCL GMK V + + + N + QI EL VD + Y Sbjct: 68 PSPGPQQMHSPGMHSPTSSMGSPPMLCLSPTGPSPSPGL-----PHSSLH---------TKHICAICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLTY---ACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAVQEERQRVKEKGDGEVESTSGANNDMPVEQILEAELAVDPKIDTY 231
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|585723|sp|P37234.1|PPARG_XENLA (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 76.2554 bits (186), Expect = 1.738e-13 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 89 SEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 S+ E+ N A++C +C D A F+YGV AC C+GFF+R++R K + + CRI +SR C++CRFQKCL GM Sbjct: 98 SKAFEDTPNSFIAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLIYE----RCDLNCRIHKKSRNKCQFCRFQKCLAVGM 177
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600350|gb|AID52836.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 279/452 (61.73%), Postives = 348/452 (76.99%), Query Frame = 0 Query: 6 FDILKFICDEFSASDQVALCDPPNLAQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVK--CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND-GGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 FDILK+ICD+ + ++ PN SL SNG P ++ S S V P V SSSEDLEE ++ + CPIC+D+AGKHFYYGVQACISCRGFFQRSVRN+F++KF CCKG+Q CRITARSRKNCKWCRFQKCLQ+GMKTCYV+++D G ++K ++PI+ M K A+LSQIFTE EVD+ALSIYKNLLSFGYRSYYQLFS+N++EF++F++ +N++G + IS++FTE+NKQATINYFFSIDDM +L+PFDRMTLI+ N+P IFGLLWSVYSY PDLCTFYEEFLKHGYE R +PEIDKIL + E QL+G+KPKNL+I +TF+ + AT DLIQ+HDNLV EVN GLRE+ Q+ ADY+IV+LL+HI MF+T+F SLQ++ +IQA QEKYLVLLHRYL +HY+GRAR+KLSE +M+ Sbjct: 15 FDILKYICDDLAGLEKDF--SSPN------SLDFAPRSNG-----PPIESESHFSQVEPMTPIQPFMQV-----------SSSSEDLEETQSEVGTQQPLCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHDKSGLPPKSKLILPIKAMVKTANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAFTETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPDLCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSNSATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRTHYQGRARAKLSETMMI 442
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 130.183 bits (326), Expect = 1.256e-28 Identity = 132/453 (29.14%), Postives = 211/453 (46.58%), Query Frame = 0 Query: 45 GIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTA-------VKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTEL-------------------EVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNN-EGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIE-LKQLMGQKPKNLSIAITFQKHP--ATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSK-LSEILMLSLGTLAGKGASI 466 GI++S + SSS+ G P +P + + ++ P + D EE KST KC IC + AGKH YYG +AC SCR FF+R+V++K+Y F C KG ++C I ++R++C++CRF+KCL +GM+ +VL DG R + ++ KN SQI +L E+D ++ + S G +S + F Q EF+ + + G + Q F + + ++ LS DR LI N P + SV + C L +G E + E + ++E L QL K + F P ++ + ++ NL+ ++ R+ + D + + L I FS DF +L+ R ++AIQ KY+ +LHRYL+ Y +A +K L+ LM+S T A + SI Sbjct: 129 GISLSPETTNFSSSL-GSPDDPENFPSELILQVNPEPQKSP--GALDSEENLPKSTMPPSNWDNTKCYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKG-EKCEINLKTRRSCQFCRFKKCLASGMRVAWVLP-DGERNRRFNKL--HKSAKKNN--SQIEGDLKVVAKKPKGPLEIQGVLPGEIDMIRGVHMKVDSLGAKSLRE-FILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLTTSEEFKMLSFGDRRQLIEVNGPLLNRFKCSVTIQETNSC------LVNGIEQATKSGEFPYLNDIVEKLAQLNMTDRKPILAYNQFYASPWASSKEAEGRYFNLMIKMKAWPRDNIASPVDEIQMTLAKMIIAFSPDFL-NLEQRSVVEAIQMKYVSMLHRYLVFRYGAKAATKRLAAGLMMS--TYAREAQSI 562
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|728054567|gb|AIY67763.1| (HR97a-like receptor 4 [Tigriopus japonicus]) HSP 1 Score: 125.561 bits (314), Expect = 1.648e-27 Identity = 94/371 (25.34%), Postives = 178/371 (47.98%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGG------------AATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTE--SNKQATI--NYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYE---EFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHP-ATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 C +C+ AGKH YYG Q C SCR FF+RS++N+ + + C K + C I ++SRK+C WCRFQKCL AGM +++++ A + ++PI+ + + V++ L + + L + + + + + + ++ ++ + ++ + S F K+ TI +++M +L DR TL+ +N F L+ S+Y D E E L + +P++ + +E+ + M P LS + P +L N+++++ LRE D +I+ ++ +F +D L++ ++++ IQ + +LHRYL S Y +A K+ +++ML Sbjct: 71 CHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHC-KAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERKFKLEAKQSKIMKAKMKQEIVPIQ--------RPVELKFTVEEKLKVER-LSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIK-MSNFP-GLSFETFYSNCPNKDENLSNAQRNIMNKIQSALREMPNKPIDAIIICIVILNLIFLSDGSSPLKDGKKVERIQNDQIFMLHRYLRSKYGDKASGKMGKLVML 429
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600348|gb|AID52835.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 124.405 bits (311), Expect = 5.364e-27 Identity = 102/373 (27.35%), Postives = 167/373 (44.77%), Query Frame = 0 Query: 103 KCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIF-----TELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMN-NEGVDNTSI--SQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYE--EFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPA--TTDLIQKHDNLVSEVNGGLRE-------------AGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSE 450 +CP+C + +GKH YYG Q C SCR FF+RS N + +F CK S+ C I ++S K+CK+CR+QKCL AGMK+ +VL+++ A + + S+ F T E Q + L G+ Q S N F ++ +N N D + ++ F S +I+ + D + P DR L++ NYP LW +F E +F H E + K + ++ + + TF K + + K +NL+++ + R + + AD +++ L+ I +FS+D LQ+ + IQ +Y +L+RY+ G+A KL E Sbjct: 107 ECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQ-CKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEERVQRNANRKRLRKIREAGVAFSETFIGNQWTTDEEHQIRQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCLNGNTPFDPMLVGYTRRFIYSEVMKSISDLLIMKD---IHPVDRFLLLSHNYP-----LW---------VSFEEAVQFRNHQ-EMEKIQQTFSKCIRTLKSSSDLWPNANIDHLQRTFDKLSVHDNANFLDKLNNLITDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSD-SLKLQSEGVVSKIQNQYCYMLYRYVNFKSPGKAHVKLGE 459
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600346|gb|AID52834.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 124.02 bits (310), Expect = 9.956e-27 Identity = 92/374 (24.60%), Postives = 170/374 (45.45%), Query Frame = 0 Query: 98 KSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRS---------YYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEI------DKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQ------KHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSE 450 ++ A CP+C + +GKH YYG Q C SCR FF+RS N +F CK ++C I ++S K+CK+CRFQKCL AGM+ +V++++ AK R T+ + + +E + ++ ++L G R + ++ N FI NN ++ + + F + + +++P DR L+++NY +WS + L +E +K+ R+ +I D+ + +++ M + +S+ + +LIQ + +L++ + + +D ++ L+ I + D L + + Q +Y +L+RY+ S Y G+A SKL E Sbjct: 109 ETAAFHCPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFR-CKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAK-----RKRTRTKRVDNVVSEAVLSHQWTVDEDLQIRGIREEIFEKTSCIIAKFYADNPMILNKFIACANNRTPFDSVLLAYTKRFVSNGMMKMFNELLVLQHINPMDRFLLLSRNYA-----MWSSFE-EAILFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDK----ISLEDNVESSDVIDNLIQDQQTRDRRRSLITSIQAWPKFNANGVSDDILTTLMMMILICCPD-ALQLNSESAVSQFQNQYCYILYRYINSKYPGQAHSKLGE 465
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|728054565|gb|AIY67762.1| (HR97a-like receptor 6 [Tigriopus japonicus]) HSP 1 Score: 123.25 bits (308), Expect = 1.977e-26 Identity = 104/394 (26.40%), Postives = 182/394 (46.19%), Query Frame = 0 Query: 87 SSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND--------GGAATRAKAVIPIRTMTKNASLSQIFTELE-----VDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATIN-YFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSV-YSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQK--HDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEIL--MLSLGTLAG 461 SSS + E I T + C +C + AGKH YYG Q C+SCR FF+R+V K Y +F C K Q C I ++S K+C++CRFQKCLQ+GM+ +V + D A + K ++P + ++ L E + A + ++++ Y + F+ FL V NN + + N + + ++F+ DM +L D+ L+N+N IF L V Y D+ + + E S D ++ ++ L N++ T + D K +L++E+ R D ++ L+ ++ +F + ++LQ+ +++ IQ K+L +L RYL + +A K+ + + + L TL+ Sbjct: 92 SSSVEPEAI---KTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQ-CVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPSGPSKGSKAKPKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPVYFASIISVFLLDFSVENNPFMTKSEFYGQMV--NMELSFKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLKERASQDESCQNVVAMLSNFTLSDHPEDNITPNTTTSLCLLSADDESKSLESSLMTEIQEWNRLFPHGPCDPIMQTLMGYLIIFDPNM-KNLQDYKKVCDIQTKFLHMLQRYLKAKVPKQATKKIGQAVEFITKLRTLSN 478
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600342|gb|AID52832.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 105.531 bits (262), Expect = 7.475e-21 Identity = 90/381 (23.62%), Postives = 171/381 (44.88%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKA-----VIPIRTMTKNAS--LSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFF----SIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILMLSLGTLAGKGASIEEEKLNL 473 C +C D AG+H YYG Q+C CR FF+R V+ C S C + +R+ C++CRF +CL GM+ +VLS+ K + I T S +S + + ++ + ++ + + +++F+ + VM+ G + F E N+ F S+ + +L D+ L+ N + L ++V + D C Y FL+ ++ P ++ ++ + KP+ + + A+ ++H LV+++ R+ Q+R D V + LL I +FS++F +LQ + ++ Q K++ LL +Y+ Y A +L LML + A + I++ ++ + Sbjct: 47 CQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERERRYRKTANGSHAVSIATQKSPVSNRISLLVLTTNDNTHITAHMKMMDAHFVRNMDVVCAQKQDFIRKMAVMSYFGGQSDF---EFYEEFYSLCDNFVFQVMSSVLEFRSLPVQDQQELVRVNGQYMVALKYAVSLHETDWCFVY--FLERALKSGKF-PYLNDFAQELDAFGMSEHKPRLMYSQVFSSPWAASAADEERHLFLVNKMQSWPRKDAQDRVDDVQMNLLKLIILFSSEFV-NLQRPDIVEQTQMKFIGLLQKYMKFRYGPEAGVRLGNGLMLL--SYAKEAIDIQKRRIRI 418
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 102.449 bits (254), Expect = 3.374e-19 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0 Query: 99 STAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 S KC IC++ A KH +YG C SCR FF+RS++NK ++C + SQ C I R+RKNC++CR+QKCL GMKT +VLS + Sbjct: 36 SPTEKCKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTC-RRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEE 118
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis]) HSP 1 Score: 95.1301 bits (235), Expect = 6.063e-17 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 C +C + AGKH YYG Q C SCR FF+RSV+++ Y F C S+ C I +RKNC++CR+ KCL GM+ ++LS + Sbjct: 184 CQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEE 262
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 92.0485 bits (227), Expect = 6.760e-16 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 99 STAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 S KC +C + A +H +YG C SCR FF+RS++NK + +SC + Q C I +SRKNC+ CR+++CL AGMK +VLS + Sbjct: 83 SDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQ-CEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEE 165 The following BLAST results are available for this feature:
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of steroid hormone receptor err2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of steroid hormone receptor err2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold394_size185225:107585..115947+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold394_size185225-processed-gene-0.7 ID=snap_masked-scaffold394_size185225-processed-gene-0.7|Name=steroid hormone receptor err2|organism=Tigriopus kingsejongensis|type=gene|length=8363bp|location=Sequence derived from alignment at scaffold394_size185225:107585..115947+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'steroid hormone receptor err2' has the following synonyms
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