steroid hormone receptor err2, snap_masked-scaffold394_size185225-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 49.2914 bits (116), Expect = 5.383e-7 Identity = 41/144 (28.47%), Postives = 59/144 (40.97%), Query Frame = 0 Query: 104 CPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFI 246 C +C + AG HF G C C+ FF R+ S CK + C I ++R +CK CR +KCL+ GM S G R + + N+S E+ V + KN +NQ+E L+ I Sbjct: 38 CRVCDEPAAGYHF--GAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGM------SKAGSRYGRRSNWFKMHCVMSNSSSKMPRNEMMVKTSREEEKN--------------RNQEELLANI 159
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Match: EMLSAG00000012964 (supercontig:LSalAtl2s:LSalAtl2s98:1204108:1205793:-1 gene:EMLSAG00000012964 transcript:EMLSAT00000012964 description:"snap_masked-LSalAtl2s98-processed-gene-12.16") HSP 1 Score: 45.0542 bits (105), Expect = 9.975e-7 Identity = 15/34 (44.12%), Postives = 26/34 (76.47%), Query Frame = 0 Query: 147 SQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLS 180 ++ C +T +RK+C++CRF KCL GMK+ +V++ Sbjct: 14 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 47
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1718061|sp|P54779.1|USP_MANSE (RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear receptor subfamily 2 group B member 4) HSP 1 Score: 83.9593 bits (206), Expect = 4.636e-16 Identity = 91/342 (26.61%), Postives = 142/342 (41.52%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLI-QKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYL 436 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V AA T++A S EL +++ L I L + +EF F++V GV +S NKQ A + + I L D++ LI ++ +F + W Y D + ++RS P QLM P +T ++ A + Q D ++SE++ +R ++A+YV L I + + D + L+N+ + ++EK L Y+ Sbjct: 113 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLTY---ACREDRNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAA----------RGTEDAHPSSSVQELSIERLLEIES------------LVADPPEEF-QFLRVGPESGVPAKYRAPVSSLCQIGNKQIAALVVWARDIPHFGQLELEDQILLIKNSWNELLLFAIAWRSMEYLTD--------ERENVDSRSTAP-----------PQLMCLMP-----GMTLHRNSALQAGVGQIFDRVLSELSLKMRTLRMDQAEYVA---LKAIILLNPDV-KGLKNKPEVVVLREKMFSCLDEYV 398
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1209676900|sp|O95718.3|ERR2_HUMAN (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=ERR beta-2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 80.1073 bits (196), Expect = 7.118e-15 Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF L +GT +NG + SP + + + G P + +S + SG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 41 ASGGFGLALGTHANG--LDSPPMFAGAGLGGTPCR------KSYEDCASGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 168
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|1345734|sp|P49700.1|USP_BOMMO (RecName: Full=Protein ultraspiracle homolog; AltName: Full=BmCF1; AltName: Full=Nuclear receptor subfamily 2 group B member 4; AltName: Full=RXR type hormone receptor CF1) HSP 1 Score: 80.1073 bits (196), Expect = 8.899e-15 Identity = 90/344 (26.16%), Postives = 141/344 (40.99%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYEN---RSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLI-QKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRY 435 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V AA R T++A S EL +++ L + + + E L ++V GV +S NKQ A I + I L D++ LI ++ +F + W EFL EN R+ P QL+ P +T ++ A + Q D ++SE++ +R ++A+ V L I + + D + L+N++ + ++EK + L Y Sbjct: 114 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLTYA---CREDKNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAARR----------TEDAHPSSSVQELSIERLLEL-------------EALVADSAEELQILRVGPESGVPAKYRAPVSSLCQIGNKQIAALIVWARDIPHFGQLEIDDQILLIKGSWNELLLFAIAWRSM-----------EFLNDERENVDSRNTAP-----------PQLICLMP-----GMTLHRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAECVA---LKAIILLNPDV-KGLKNKQEVDVLREKMFLCLDEY 398
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|18202151|sp|O76202.1|USP_CHOFU (RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear receptor subfamily 2 group B member 4) HSP 1 Score: 78.1814 bits (191), Expect = 3.335e-14 Identity = 88/341 (25.81%), Postives = 144/341 (42.23%), Query Frame = 0 Query: 104 CPICHDLA-GKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVD---NTSISQSFTESNKQ--ATINYFFSIDDMVNLSPFDRMTLINKNYPG--IFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQK-HDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRY 435 C IC D A GKH YGV +C C+GFF+R+VR C+ + C I R R C++CR+QKCL GMK V A A+ P +S Q+ EL +++ L+ ++L++ + E F++V + V +S NKQ A + + I L D++ LI ++ +F + W Y E+ ++G RS QLM P +T ++ A + D ++SE++ +R ++A+YV L I + + D + L+NR+ + ++EK L Y Sbjct: 119 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRKDLSY---ACREERNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRNARGAEDAHP-------SSSVQVSDELSIER-LTEMESLVA------------DPSEEFQFLRVGPDSNVPPRYRAPVSSLCQIGNKQIAALVVWARDIPHFGQLELDDQVVLIKASWNELLLFAIAWRSMEY-------LEDERENGDGTRST-----------TQPQLMCLMP-----GMTLHRNSAQQAGVGAIFDRVLSELSLKMRTLRMDQAEYVA---LKAIVLLNPDV-KGLKNRQEVDVLREKMFSCLDDY 407
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|119561|sp|P11475.1|ERR2_RAT (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 77.7962 bits (190), Expect = 4.158e-14 Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 31 AQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 A GF + +GT +NG + SP + + + G P + +S + SG E S+ E + N C +C D+A ++YGV +C +C+ FF+R+++ +++SC + C IT R RK+C+ CRF KCL+ GM Sbjct: 41 ASGGFGMALGTHANG--LDSPPMFAGAGLGGNPCR------KSYEDCTSGIM---EDSAIKCEYMLNAIPKRLCLVCGDIASG-YHYGVASCEACKAFFKRTIQGN--IEYSC-PATNECEITKRRRKSCQACRFMKCLKVGM 168
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|7676156|sp|O00482.2|NR5A2_HUMAN (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Alpha-1-fetoprotein transcription factor; AltName: Full=B1-binding factor; Short=hB1F; AltName: Full=CYP7A promoter-binding factor; AltName: Full=Hepatocytic transcription factor; AltName: Full=Liver receptor homolog 1; Short=LRH-1) HSP 1 Score: 78.1814 bits (191), Expect = 4.566e-14 Identity = 54/151 (35.76%), Postives = 74/151 (49.01%), Query Frame = 0 Query: 44 NGIAMSSPGLDPSSSVSGVPTQ--MLFYPQQSVPEMGSGRSVG-----PE------------SSSEDLEEIFNKSTAVKCPICHD-LAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMK 174 +G+ GL P S +P + ++ P+ +G RS G PE S EDLEE+ CP+C D ++G H YG+ C SC+GFF+R+V+N K C +Q C+I RK C +CRFQKCL GMK Sbjct: 16 HGLTPIGAGL-PDRHGSPIPARGRLVMLPKVETEALGLARSHGEQGQMPENMQVSQFKMVNYSYDEDLEEL--------CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNN---KRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMK 152
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|3024414|sp|O19052.1|PPARG_RABIT (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.391e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 98 EEPSNSLMAIECRVCSDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 173
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431788|sp|O18924.1|PPARG_MACMU (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.655e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|75068622|sp|Q4U3Q4.1|PPARG_CANFA (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.714e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 128 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 203
BLAST of steroid hormone receptor err2 vs. SwissProt
Match: gi|13431782|sp|O62807.1|PPARG_PIG (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 77.411 bits (189), Expect = 6.755e-14 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 93 EEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGM 173 EE N A++C +C D A F+YGV AC C+GFF+R++R K + C CRI +SR C++CRFQKCL GM Sbjct: 127 EEPSNSLMAIECRVCGDKASG-FHYGVHACEGCKGFFRRTIRLKLI--YDRC--DLNCRIHKKSRNKCQYCRFQKCLAVGM 202
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600350|gb|AID52836.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 279/452 (61.73%), Postives = 348/452 (76.99%), Query Frame = 0 Query: 6 FDILKFICDEFSASDQVALCDPPNLAQVGFSLPVGTPSNGIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTAVK--CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND-GGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 FDILK+ICD+ + ++ PN SL SNG P ++ S S V P V SSSEDLEE ++ + CPIC+D+AGKHFYYGVQACISCRGFFQRSVRN+F++KF CCKG+Q CRITARSRKNCKWCRFQKCLQ+GMKTCYV+++D G ++K ++PI+ M K A+LSQIFTE EVD+ALSIYKNLLSFGYRSYYQLFS+N++EF++F++ +N++G + IS++FTE+NKQATINYFFSIDDM +L+PFDRMTLI+ N+P IFGLLWSVYSY PDLCTFYEEFLKHGYE R +PEIDKIL + E QL+G+KPKNL+I +TF+ + AT DLIQ+HDNLV EVN GLRE+ Q+ ADY+IV+LL+HI MF+T+F SLQ++ +IQA QEKYLVLLHRYL +HY+GRAR+KLSE +M+ Sbjct: 15 FDILKYICDDLAGLEKDF--SSPN------SLDFAPRSNG-----PPIESESHFSQVEPMTPIQPFMQV-----------SSSSEDLEETQSEVGTQQPLCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHDKSGLPPKSKLILPIKAMVKTANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAFTETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPDLCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSNSATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRTHYQGRARAKLSETMMI 442
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 130.183 bits (326), Expect = 1.256e-28 Identity = 132/453 (29.14%), Postives = 211/453 (46.58%), Query Frame = 0 Query: 45 GIAMSSPGLDPSSSVSGVPTQMLFYPQQSVPEMGSGRSVGPESSSEDLEEIFNKSTA-------VKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTEL-------------------EVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNN-EGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIE-LKQLMGQKPKNLSIAITFQKHP--ATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSK-LSEILMLSLGTLAGKGASI 466 GI++S + SSS+ G P +P + + ++ P + D EE KST KC IC + AGKH YYG +AC SCR FF+R+V++K+Y F C KG ++C I ++R++C++CRF+KCL +GM+ +VL DG R + ++ KN SQI +L E+D ++ + S G +S + F Q EF+ + + G + Q F + + ++ LS DR LI N P + SV + C L +G E + E + ++E L QL K + F P ++ + ++ NL+ ++ R+ + D + + L I FS DF +L+ R ++AIQ KY+ +LHRYL+ Y +A +K L+ LM+S T A + SI Sbjct: 129 GISLSPETTNFSSSL-GSPDDPENFPSELILQVNPEPQKSP--GALDSEENLPKSTMPPSNWDNTKCYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKG-EKCEINLKTRRSCQFCRFKKCLASGMRVAWVLP-DGERNRRFNKL--HKSAKKNN--SQIEGDLKVVAKKPKGPLEIQGVLPGEIDMIRGVHMKVDSLGAKSLRE-FILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLTTSEEFKMLSFGDRRQLIEVNGPLLNRFKCSVTIQETNSC------LVNGIEQATKSGEFPYLNDIVEKLAQLNMTDRKPILAYNQFYASPWASSKEAEGRYFNLMIKMKAWPRDNIASPVDEIQMTLAKMIIAFSPDFL-NLEQRSVVEAIQMKYVSMLHRYLVFRYGAKAATKRLAAGLMMS--TYAREAQSI 562
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|728054567|gb|AIY67763.1| (HR97a-like receptor 4 [Tigriopus japonicus]) HSP 1 Score: 125.561 bits (314), Expect = 1.648e-27 Identity = 94/371 (25.34%), Postives = 178/371 (47.98%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGG------------AATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTE--SNKQATI--NYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYE---EFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHP-ATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILML 454 C +C+ AGKH YYG Q C SCR FF+RS++N+ + + C K + C I ++SRK+C WCRFQKCL AGM +++++ A + ++PI+ + + V++ L + + L + + + + + + ++ ++ + ++ + S F K+ TI +++M +L DR TL+ +N F L+ S+Y D E E L + +P++ + +E+ + M P LS + P +L N+++++ LRE D +I+ ++ +F +D L++ ++++ IQ + +LHRYL S Y +A K+ +++ML Sbjct: 71 CHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHC-KAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERKFKLEAKQSKIMKAKMKQEIVPIQ--------RPVELKFTVEEKLKVER-LSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIK-MSNFP-GLSFETFYSNCPNKDENLSNAQRNIMNKIQSALREMPNKPIDAIIICIVILNLIFLSDGSSPLKDGKKVERIQNDQIFMLHRYLRSKYGDKASGKMGKLVML 429
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600348|gb|AID52835.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 124.405 bits (311), Expect = 5.364e-27 Identity = 102/373 (27.35%), Postives = 167/373 (44.77%), Query Frame = 0 Query: 103 KCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIF-----TELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMN-NEGVDNTSI--SQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYE--EFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPA--TTDLIQKHDNLVSEVNGGLRE-------------AGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSE 450 +CP+C + +GKH YYG Q C SCR FF+RS N + +F CK S+ C I ++S K+CK+CR+QKCL AGMK+ +VL+++ A + + S+ F T E Q + L G+ Q S N F ++ +N N D + ++ F S +I+ + D + P DR L++ NYP LW +F E +F H E + K + ++ + + TF K + + K +NL+++ + R + + AD +++ L+ I +FS+D LQ+ + IQ +Y +L+RY+ G+A KL E Sbjct: 107 ECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQ-CKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEERVQRNANRKRLRKIREAGVAFSETFIGNQWTTDEEHQIRQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCLNGNTPFDPMLVGYTRRFIYSEVMKSISDLLIMKD---IHPVDRFLLLSHNYP-----LW---------VSFEEAVQFRNHQ-EMEKIQQTFSKCIRTLKSSSDLWPNANIDHLQRTFDKLSVHDNANFLDKLNNLITDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSD-SLKLQSEGVVSKIQNQYCYMLYRYVNFKSPGKAHVKLGE 459
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600346|gb|AID52834.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 124.02 bits (310), Expect = 9.956e-27 Identity = 92/374 (24.60%), Postives = 170/374 (45.45%), Query Frame = 0 Query: 98 KSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKAVIPIRTMTKNASLSQIFTELEVDQALSIYKNLLSFGYRS---------YYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEI------DKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQ------KHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSE 450 ++ A CP+C + +GKH YYG Q C SCR FF+RS N +F CK ++C I ++S K+CK+CRFQKCL AGM+ +V++++ AK R T+ + + +E + ++ ++L G R + ++ N FI NN ++ + + F + + +++P DR L+++NY +WS + L +E +K+ R+ +I D+ + +++ M + +S+ + +LIQ + +L++ + + +D ++ L+ I + D L + + Q +Y +L+RY+ S Y G+A SKL E Sbjct: 109 ETAAFHCPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFR-CKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAK-----RKRTRTKRVDNVVSEAVLSHQWTVDEDLQIRGIREEIFEKTSCIIAKFYADNPMILNKFIACANNRTPFDSVLLAYTKRFVSNGMMKMFNELLVLQHINPMDRFLLLSRNYA-----MWSSFE-EAILFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDK----ISLEDNVESSDVIDNLIQDQQTRDRRRSLITSIQAWPKFNANGVSDDILTTLMMMILICCPD-ALQLNSESAVSQFQNQYCYILYRYINSKYPGQAHSKLGE 465
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|728054565|gb|AIY67762.1| (HR97a-like receptor 6 [Tigriopus japonicus]) HSP 1 Score: 123.25 bits (308), Expect = 1.977e-26 Identity = 104/394 (26.40%), Postives = 182/394 (46.19%), Query Frame = 0 Query: 87 SSSEDLEEIFNKSTAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND--------GGAATRAKAVIPIRTMTKNASLSQIFTELE-----VDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATIN-YFFSIDDMVNLSPFDRMTLINKNYPGIFGLLWSV-YSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQK--HDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEIL--MLSLGTLAG 461 SSS + E I T + C +C + AGKH YYG Q C+SCR FF+R+V K Y +F C K Q C I ++S K+C++CRFQKCLQ+GM+ +V + D A + K ++P + ++ L E + A + ++++ Y + F+ FL V NN + + N + + ++F+ DM +L D+ L+N+N IF L V Y D+ + + E S D ++ ++ L N++ T + D K +L++E+ R D ++ L+ ++ +F + ++LQ+ +++ IQ K+L +L RYL + +A K+ + + + L TL+ Sbjct: 92 SSSVEPEAI---KTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQ-CVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPSGPSKGSKAKPKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPVYFASIISVFLLDFSVENNPFMTKSEFYGQMV--NMELSFKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLKERASQDESCQNVVAMLSNFTLSDHPEDNITPNTTTSLCLLSADDESKSLESSLMTEIQEWNRLFPHGPCDPIMQTLMGYLIIFDPNM-KNLQDYKKVCDIQTKFLHMLQRYLKAKVPKQATKKIGQAVEFITKLRTLSN 478
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600342|gb|AID52832.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 105.531 bits (262), Expect = 7.475e-21 Identity = 90/381 (23.62%), Postives = 171/381 (44.88%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSNDGGAATRAKA-----VIPIRTMTKNAS--LSQIFTELEVDQALSIYKNLLSFGYRSYYQLFSKNQKEFLSFIQVMNNEGVDNTSISQSFTESNKQATINYFF----SIDDMVNLSPFDRMTLINKNYPGIFGLLWSVYSYHPDLCTFYEEFLKHGYENRSVDPEIDKILGLIELKQLMGQKPKNLSIAITFQKHPATTDLIQKHDNLVSEVNGGLREAGQNRADYVIVLLLAHIFMFSTDFGESLQNRERIQAIQEKYLVLLHRYLISHYKGRARSKLSEILMLSLGTLAGKGASIEEEKLNL 473 C +C D AG+H YYG Q+C CR FF+R V+ C S C + +R+ C++CRF +CL GM+ +VLS+ K + I T S +S + + ++ + ++ + + +++F+ + VM+ G + F E N+ F S+ + +L D+ L+ N + L ++V + D C Y FL+ ++ P ++ ++ + KP+ + + A+ ++H LV+++ R+ Q+R D V + LL I +FS++F +LQ + ++ Q K++ LL +Y+ Y A +L LML + A + I++ ++ + Sbjct: 47 CQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERERRYRKTANGSHAVSIATQKSPVSNRISLLVLTTNDNTHITAHMKMMDAHFVRNMDVVCAQKQDFIRKMAVMSYFGGQSDF---EFYEEFYSLCDNFVFQVMSSVLEFRSLPVQDQQELVRVNGQYMVALKYAVSLHETDWCFVY--FLERALKSGKF-PYLNDFAQELDAFGMSEHKPRLMYSQVFSSPWAASAADEERHLFLVNKMQSWPRKDAQDRVDDVQMNLLKLIILFSSEFV-NLQRPDIVEQTQMKFIGLLQKYMKFRYGPEAGVRLGNGLMLL--SYAKEAIDIQKRRIRI 418
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 102.449 bits (254), Expect = 3.374e-19 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0 Query: 99 STAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 S KC IC++ A KH +YG C SCR FF+RS++NK ++C + SQ C I R+RKNC++CR+QKCL GMKT +VLS + Sbjct: 36 SPTEKCKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTC-RRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEE 118
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis]) HSP 1 Score: 95.1301 bits (235), Expect = 6.063e-17 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 104 CPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 C +C + AGKH YYG Q C SCR FF+RSV+++ Y F C S+ C I +RKNC++CR+ KCL GM+ ++LS + Sbjct: 184 CQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEE 262
BLAST of steroid hormone receptor err2 vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 92.0485 bits (227), Expect = 6.760e-16 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 99 STAVKCPICHDLAGKHFYYGVQACISCRGFFQRSVRNKFYVKFSCCKGSQRCRITARSRKNCKWCRFQKCLQAGMKTCYVLSND 182 S KC +C + A +H +YG C SCR FF+RS++NK + +SC + Q C I +SRKNC+ CR+++CL AGMK +VLS + Sbjct: 83 SDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQ-CEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEE 165 The following BLAST results are available for this feature:
BLAST of steroid hormone receptor err2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
Pagesback to top
BLAST of steroid hormone receptor err2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of steroid hormone receptor err2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold394_size185225:107585..115947+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold394_size185225-processed-gene-0.7 ID=snap_masked-scaffold394_size185225-processed-gene-0.7|Name=steroid hormone receptor err2|organism=Tigriopus kingsejongensis|type=gene|length=8363bp|location=Sequence derived from alignment at scaffold394_size185225:107585..115947+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'steroid hormone receptor err2' has the following synonyms
Add to Basket
|