nuclear receptor subfamily 1 group i member 2-like, snap_masked-scaffold464_size163657-processed-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 83.5741 bits (205), Expect = 3.142e-17 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCF-KVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRK 135 PR C +C + KH ++YG C SCRAFFRRS+Q +F C + DC I K+R+ CQ CRFQKC+ GM++ V D +ERR +K Sbjct: 104 PRLCQICG-EVAGKH--VYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPD--RERRSKK 191
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 83.9593 bits (206), Expect = 4.592e-17 Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 0 Query: 35 QNSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR-----FRKFLAKKRKHSNSQEPSSG 152 N+PSS P+ VC I D + +HYG +TC C+ FF+R++Q R + C G+C+I R +CQ CRFQKCL+ GM + V D R + + K +KH + S G Sbjct: 270 NNNPSSQ--PQQSLVCMICED-RATGLHYGIITCEGCKGFFKRTVQNKRI--YTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKHKRANSSSGG 387
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 82.8037 bits (203), Expect = 6.798e-17 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCF-KVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRK 135 PR C +C + KH ++YG C SCRAFFRRS+Q +F C K DC I ++R+ CQ CRFQKC+ GM+ VL D ERR +K Sbjct: 103 PRLCQICG-EVAGKH--VYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPD--GERRSKK 190
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 80.8777 bits (198), Expect = 2.436e-16 Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 C I DT + IHYGA+ C SCRAFFRR++ E+ C + C IT ++R+ CQ CRF KCLE GMK V+++++K + K KK K +P +G Sbjct: 62 TCHICSDTANDHIHYGAIACXSCRAFFRRAV--ICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLKAQQLLDPENG 163
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 80.8777 bits (198), Expect = 4.744e-16 Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFR 134 +C + D A HYG TC C+ FF+R++QK K + C +C + + R +CQ CRFQKCL VGM E+V TD+ K RR R Sbjct: 408 LCAVCGDNA-ACQHYGVRTCEGCKGFFKRTVQKNAK--YVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR 490
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 80.1073 bits (196), Expect = 4.963e-16 Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQK-ERRFRKFLAKKR 141 VC + D IHYG + C+SCRAFFRRS+ K + C C IT +R+ CQ CR++KCLE GMK VL++ +K R K++ K + Sbjct: 90 VCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPK--HTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNK 181
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 75.8702 bits (185), Expect = 1.357e-14 Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFR 134 C VC K + HYG LTC SC+ FF+R++Q K + C C I R++C CRFQKCL+VGMK+E V D + R + Sbjct: 186 CPVC----GDKVSGYHYGLLTCESCKGFFKRTVQN--KKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNK 267
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 75.0998 bits (183), Expect = 1.768e-14 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFK-----VGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQK 129 DVC I D HYGA+ C+SCRAFF R++ K + F+C + G C IT +R CQ CR++ CL GM V T ++ Sbjct: 135 DVCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 75.0998 bits (183), Expect = 1.907e-14 Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR 132 C VC K + HYG +C SC+ FF+R++Q K + C + C +T +R+KC CRF KCL +GMK+E + D + R Sbjct: 155 CPVC----GDKISGFHYGIFSCESCKGFFKRTVQN--KKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGR 234
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 71.2478 bits (173), Expect = 3.241e-13 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTD 126 ++C + D + + HY AL C C+ FFRRS+ T+ + C GDC+I RRKCQ CR +KC GM+ E V+ + Sbjct: 171 ELCLVCGD-RASGYHYNALACEGCKGFFRRSI--TKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPE 246
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|75065697|sp|Q8SQ01.1|NR1I2_MACMU (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 93.9745 bits (232), Expect = 3.013e-19 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPS 150 N+ + GP+ C VC K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E R KKR+ +Q P Sbjct: 30 NADEEVGGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMK--RNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEERRALIKRKKRERIGTQPPG 139
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|6093861|sp|O54915.1|NR1I2_MOUSE (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 91.6633 bits (226), Expect = 1.750e-18 Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 0 Query: 27 SQMSSMECQNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 S++ ++C+ + S+++ P N + +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+ R+ L K++K + P G Sbjct: 8 SRVGLVQCEEADSALEEPINVEEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQ--RRALIKRKKREKIEAPPPG 136
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|6093860|sp|O75469.1|NR1I2_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PAR1; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor; AltName: Full=Steroid and xenobiotic receptor; Short=SXR) HSP 1 Score: 91.6633 bits (226), Expect = 2.185e-18 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEP 149 N+ + GP+ C VC K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E R R + +K+ +P Sbjct: 30 NADEEVGGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMK--RNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDEAVEER-RALIKRKKSERTGTQP 137
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B) HSP 1 Score: 90.5077 bits (223), Expect = 3.990e-18 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK----HSNSQEPSSGD 153 PR C VC K H+ A+TC C+ FFRRS++ RK F C G C IT +RR CQ CR ++CL++GM E +LTD + +R +K L ++RK H +Q+P D Sbjct: 20 PRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQR--KKELIQRRKDEEAHREAQKPRLSD 125
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|3915243|sp|O42392.1|VDR_CHICK (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 88.5817 bits (218), Expect = 2.252e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 44 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 138
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|3915241|sp|O13124.1|VDR_XENLA (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.285e-17 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKR 141 PR C VC K H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ R+ + K++ Sbjct: 22 PRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFILTDEEVQRK-RQMINKRK 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|229557878|sp|Q9PTN2.2|VDRA_DANRE (RecName: Full=Vitamin D3 receptor A; Short=VDR-A; AltName: Full=1,25-dihydroxyvitamin D3 receptor A; AltName: Full=Nuclear receptor subfamily 1 group I member 1-A) HSP 1 Score: 88.1965 bits (217), Expect = 3.383e-17 Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 43 GPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK 142 PR C VC K H+ A+TC C+ FFRRS++ RK F C G+C IT +RR CQ CR ++C+++GM E +LTD + +R +K L KRK Sbjct: 52 APRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKASFTCPFNGNCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQR--KKDLIMKRK 143
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|1352835|sp|P49701.1|VDR_COTJA (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 87.8113 bits (216), Expect = 3.492e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 41 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFSGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 135
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|10720242|sp|Q9R1A7.1|NR1I2_RAT (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 87.4261 bits (215), Expect = 4.231e-17 Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0 Query: 35 QNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 + + S ++ P N D +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+ R+ L K++K + P G Sbjct: 16 EEADSVLEEPINVDEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQ--RRALIKRKKREKIEAPPPG 136
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|137618|sp|P13053.1|VDR_RAT (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 87.0409 bits (214), Expect = 6.047e-17 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK 142 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ R+ + K+++ Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRK-REMIMKRKE 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|83921639|ref|NP_001033094.1| (nuclear receptor subfamily 1 group I member 2 [Sus scrofa] >gi|83582560|dbj|BAE54305.1| pregnane X receptor [Sus scrofa]) HSP 1 Score: 95.5153 bits (236), Expect = 3.248e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|108742563|gb|ABG01906.1| (pregnane X receptor variant 5, partial [Sus scrofa]) HSP 1 Score: 94.3597 bits (233), Expect = 3.366e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|545865937|ref|XP_005670241.1| (nuclear receptor subfamily 1 group I member 2 isoform X5 [Sus scrofa]) HSP 1 Score: 94.7449 bits (234), Expect = 3.436e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1130267639|ref|XP_019771683.1| (PREDICTED: ecdysone receptor isoform X4 [Dendroctonus ponderosae]) HSP 1 Score: 95.9005 bits (237), Expect = 3.504e-17 Identity = 77/268 (28.73%), Postives = 119/268 (44.40%), Query Frame = 0 Query: 24 SDESQMSSMECQNSPSSMKG---------------PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ--KERRFRKFLAKKRKHSNSQE--PSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLG--------------------VLTL-LFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYF 251 SD S MS E + PSS+ G PR + ++ + + HY ALTC C+ FFRRS+ T+ ++C +CDI RRKCQ+CR +KCL VGM+ E V+ +TQ +R+ +K L K K +++ P+ P F LE + + IS E L+ + F S+ + +L +LT+ L FA+ LP F L ++Q L+ A + + +AR + Sbjct: 81 SDTSSMSGREDLSPPSSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSI--TKNAVYQCKYGNNCDIDMYMRRKCQECRLKKCLTVGMRPECVVPETQCAVKRKEKKALKDKDKPNSTTNGSPTGVIKIEPELLFSQLEGGEKSTGVKPISPEQEELIHRLVYFQNAYEHPSEEDVNRILKQPMDDEDQREVRFRHITEITILTVQLIVEFAKQLPGFDKLLREDQIALLKACSSEVMMFRMARRY 346
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|12847018|dbj|BAB27404.1| (unnamed protein product, partial [Mus musculus]) HSP 1 Score: 88.1965 bits (217), Expect = 3.601e-17 Identity = 42/114 (36.84%), Postives = 70/114 (61.40%), Query Frame = 0 Query: 27 SQMSSMECQNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR 132 S++ ++C+ + S+++ P N + +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+R Sbjct: 8 SRVGLVQCEEADSALEEPINVEEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQR 118
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1176312641|ref|XP_020659003.1| (bile acid receptor isoform X2 [Pogona vitticeps]) HSP 1 Score: 95.5153 bits (236), Expect = 4.094e-17 Identity = 70/219 (31.96%), Postives = 102/219 (46.58%), Query Frame = 0 Query: 37 SPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ-KERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTG-------AASLSQREFQGLLGVLTL---------LFRSFAQTLPEFRSLTVDEQTTLIDAN 238 S MKG C VC K + HY ALTC C+ FFRRS+ T+ +KC G+C++ RRKCQKCR QKC EVGM E +LT+ Q K +R RK +++ + S++ DS S +T E+ ++ E LL + + + L Q EF L L + F + LP F++L ++Q L+ + Sbjct: 101 SSGRMKGEELCVVC----GDKASGYHYNALTCEGCKGFFRRSI--TKNAVYKCKNGGNCEMDMYMRRKCQKCRLQKCKEVGMLAECLLTEIQCKSKRLRKNISQPLHQTASEDTEGCDSKQVS------STTRLYKEKVELTPEQQNLLHYIMDSYNKQRIPPEVSKKLLQEEFSAEENFLILTEMATSHVQVLVEFTKRLPGFQTLDHEDQIALLKGS 307
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1195694093|ref|XP_021040853.1| (nuclear receptor subfamily 1 group I member 2 isoform X2 [Mus caroli]) HSP 1 Score: 94.3597 bits (233), Expect = 4.619e-17 Identity = 67/247 (27.13%), Postives = 115/247 (46.56%), Query Frame = 0 Query: 27 SQMSSMECQNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQG-------------------------LLGVLTLLFR---SFAQTLPEFRSLTVDEQTTLIDA 237 SQ+ ++C+ + S+++ P N + +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+ R+ L K++K + P G G EQ+ + E + ++ Q F T + +G L V T +F+ +FA+ + FR L +++Q +L+ Sbjct: 8 SQVGLVQCEEADSALEEPINVEEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQ--RRALIKRKKREKIEAPPPG-------------GQGLTEEQQALIQE--LMDAQMQTFDTTFSHFKDFRLRGEDGSIWNYQPPSKSDGKEIIPLLPHLADVSTYMFKGVINFAKVISYFRDLPIEDQISLLKG 234
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1176312637|ref|XP_020659001.1| (bile acid receptor isoform X1 [Pogona vitticeps] >gi|1176312639|ref|XP_020659002.1| bile acid receptor isoform X1 [Pogona vitticeps]) HSP 1 Score: 95.5153 bits (236), Expect = 5.211e-17 Identity = 70/219 (31.96%), Postives = 102/219 (46.58%), Query Frame = 0 Query: 37 SPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ-KERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTG-------AASLSQREFQGLLGVLTL---------LFRSFAQTLPEFRSLTVDEQTTLIDAN 238 S MKG C VC K + HY ALTC C+ FFRRS+ T+ +KC G+C++ RRKCQKCR QKC EVGM E +LT+ Q K +R RK +++ + S++ DS S +T E+ ++ E LL + + + L Q EF L L + F + LP F++L ++Q L+ + Sbjct: 119 SSGRMKGEELCVVC----GDKASGYHYNALTCEGCKGFFRRSI--TKNAVYKCKNGGNCEMDMYMRRKCQKCRLQKCKEVGMLAECLLTEIQCKSKRLRKNISQPLHQTASEDTEGCDSKQVS------STTRLYKEKVELTPEQQNLLHYIMDSYNKQRIPPEVSKKLLQEEFSAEENFLILTEMATSHVQVLVEFTKRLPGFQTLDHEDQIALLKGS 325
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1158928872|ref|XP_020312457.1| (bile acid receptor-like isoform X2 [Oncorhynchus kisutch]) HSP 1 Score: 95.1301 bits (235), Expect = 5.959e-17 Identity = 71/217 (32.72%), Postives = 99/217 (45.62%), Query Frame = 0 Query: 39 SSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ-KERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLS-------KFQEFHTGAASLSQREFQGLLGVLTL---------LFRSFAQTLPEFRSLTVDEQTTLIDAN 238 S+KG C VC K + HY ALTC C+ FFRRS+ T+K +KC G C++ RRKCQ+CR +KC E+GM E +LT+ Q K +R RK S E GD+ D + ST ++ +S E LLS K Q A L Q +F L L + F + +P F +L ++Q L+ + Sbjct: 126 GSVKGEELCVVC----GDKASGYHYNALTCEGCKGFFRRSM--TKKAVYKCKNGGTCEMDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNPKVSPGQSTGDETEGGDNG----DTKQVTSTTKLSKNLELSQEQQALLSFIVEAYQKHQIPQDMAKKLLQEQFNAEENFLLLTEMATSHVQVLVEFTKNIPGFSALDHEDQIALLKGS 332
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1004690390|ref|XP_015745407.1| (PREDICTED: bile acid receptor [Python bivittatus]) HSP 1 Score: 94.7449 bits (234), Expect = 6.216e-17 Identity = 67/208 (32.21%), Postives = 98/208 (47.12%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ-KERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTG-------AASLSQREFQGLLGVLTL---------LFRSFAQTLPEFRSLTVDEQTTLIDAN 238 ++C + D K + HY ALTC C+ FFRRS+ T+ E+KC G+C++ RRKCQKCR QKC GM E +LT+ Q K +R RK + + S++P D S +T F E+ ++S E LL E + L Q EF L L + F + LP F++L ++Q L+ + Sbjct: 102 ELCVVCGD-KASGYHYNALTCEGCKGFFRRSI--TKNAEYKCKNGGNCEMDMYMRRKCQKCRLQKCKAAGMLAECLLTEIQCKSKRLRKSTLQPVDETTSEDPKGLDLKQVS------STTKFYKEKLKLSSEQQNLLHYIMESYNKQRIPPEVTKKLLQEEFSAEENFLILTEMATSHVKVLVEFTKRLPGFQTLDHEDQIALLKGS 300 The following BLAST results are available for this feature:
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold464_size163657:49488..51422- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold464_size163657-processed-gene-0.15 ID=snap_masked-scaffold464_size163657-processed-gene-0.15|Name=nuclear receptor subfamily 1 group i member 2-like|organism=Tigriopus kingsejongensis|type=gene|length=1935bp|location=Sequence derived from alignment at scaffold464_size163657:49488..51422- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor subfamily 1 group i member 2-like' has the following synonyms
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