nuclear receptor subfamily 1 group i member 2-like, snap_masked-scaffold464_size163657-processed-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 83.5741 bits (205), Expect = 3.142e-17 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCF-KVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRK 135 PR C +C + KH ++YG C SCRAFFRRS+Q +F C + DC I K+R+ CQ CRFQKC+ GM++ V D +ERR +K Sbjct: 104 PRLCQICG-EVAGKH--VYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPD--RERRSKK 191
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 83.9593 bits (206), Expect = 4.592e-17 Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 0 Query: 35 QNSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR-----FRKFLAKKRKHSNSQEPSSG 152 N+PSS P+ VC I D + +HYG +TC C+ FF+R++Q R + C G+C+I R +CQ CRFQKCL+ GM + V D R + + K +KH + S G Sbjct: 270 NNNPSSQ--PQQSLVCMICED-RATGLHYGIITCEGCKGFFKRTVQNKRI--YTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKHKRANSSSGG 387
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 82.8037 bits (203), Expect = 6.798e-17 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCF-KVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRK 135 PR C +C + KH ++YG C SCRAFFRRS+Q +F C K DC I ++R+ CQ CRFQKC+ GM+ VL D ERR +K Sbjct: 103 PRLCQICG-EVAGKH--VYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPD--GERRSKK 190
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 80.8777 bits (198), Expect = 2.436e-16 Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 C I DT + IHYGA+ C SCRAFFRR++ E+ C + C IT ++R+ CQ CRF KCLE GMK V+++++K + K KK K +P +G Sbjct: 62 TCHICSDTANDHIHYGAIACXSCRAFFRRAV--ICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLKAQQLLDPENG 163
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 80.8777 bits (198), Expect = 4.744e-16 Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFR 134 +C + D A HYG TC C+ FF+R++QK K + C +C + + R +CQ CRFQKCL VGM E+V TD+ K RR R Sbjct: 408 LCAVCGDNA-ACQHYGVRTCEGCKGFFKRTVQKNAK--YVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR 490
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 80.1073 bits (196), Expect = 4.963e-16 Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 49 VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQK-ERRFRKFLAKKR 141 VC + D IHYG + C+SCRAFFRRS+ K + C C IT +R+ CQ CR++KCLE GMK VL++ +K R K++ K + Sbjct: 90 VCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPK--HTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNK 181
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 75.8702 bits (185), Expect = 1.357e-14 Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFR 134 C VC K + HYG LTC SC+ FF+R++Q K + C C I R++C CRFQKCL+VGMK+E V D + R + Sbjct: 186 CPVC----GDKVSGYHYGLLTCESCKGFFKRTVQN--KKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNK 267
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 75.0998 bits (183), Expect = 1.768e-14 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFK-----VGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQK 129 DVC I D HYGA+ C+SCRAFF R++ K + F+C + G C IT +R CQ CR++ CL GM V T ++ Sbjct: 135 DVCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 75.0998 bits (183), Expect = 1.907e-14 Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR 132 C VC K + HYG +C SC+ FF+R++Q K + C + C +T +R+KC CRF KCL +GMK+E + D + R Sbjct: 155 CPVC----GDKISGFHYGIFSCESCKGFFKRTVQN--KKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGR 234
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 71.2478 bits (173), Expect = 3.241e-13 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTD 126 ++C + D + + HY AL C C+ FFRRS+ T+ + C GDC+I RRKCQ CR +KC GM+ E V+ + Sbjct: 171 ELCLVCGD-RASGYHYNALACEGCKGFFRRSI--TKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPE 246
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|161784270|sp|Q28037.2|VDR_BOVIN (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 87.0409 bits (214), Expect = 6.235e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKREMILKRKEEEA 115
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|342187016|sp|P48281.2|VDR_MOUSE (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 86.6557 bits (213), Expect = 7.124e-17 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK 142 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ R+ + K+++ Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRK-REMIMKRKE 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|190411613|sp|A3RGC1.1|VDR_PIG (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 86.6557 bits (213), Expect = 7.726e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 115
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|49036503|sp|Q95MH5.1|VDR_SAGOE (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 86.6557 bits (213), Expect = 8.081e-17 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKK 140 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRK 111
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|10720148|sp|Q9QUS1.1|NR1I3_RAT (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 85.5001 bits (210), Expect = 1.200e-16 Identity = 65/209 (31.10%), Postives = 94/209 (44.98%), Query Frame = 0 Query: 43 GPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLS-QREFQGLLGVLTLL-------------FRSFAQTLPEFRSLTVDEQTTLIDA 237 GPRNC VC + H+ ALTC C+ FFRR++ KT P C G C+++ RR C CR QKCL VGM+ +M+L+ R + ++ + ++ Q S+ L T R + + +F +F A S R FQ L VL LL F + LP FRSLT+++Q +L+ Sbjct: 17 GPRNCVVC----GDRATGYHFHALTCEGCKGFFRRTVSKTIGP--ICPFAGRCEVSKAQRRHCPACRLQKCLNVGMRKDMILSAEALALRRARQARRRAQKASLQL---------SQQQKELIQTLLGAHTRHVGP----MFDQFVQFRPPAYLFSHHRPFQPLAPVLPLLTHFADINTFMVQQIIKFTKDLPLFRSLTMEDQISLLKG 206
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|137617|sp|P11473.1|VDR_HUMAN (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 85.8853 bits (211), Expect = 1.438e-16 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 115
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|133700|sp|P28701.1|RXRG_CHICK (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 85.5001 bits (210), Expect = 2.111e-16 Identity = 84/327 (25.69%), Postives = 140/327 (42.81%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYFMSVSGQEQLEWLFGTGI----SGSHEKGLLYYIPLQSYIDLYQVFSWTNPSGLKVFFDLSAALRRYDIDFGSTGSIAQCLLFTSDLEQPWSSSQPVSPFEKYKANLQATYK 358 N PS+ G +C I D + + HYG +C C+ FF+R+++K + C DC I + R +CQ CR+QKCL +GMK E V Q+ER+ +++R + ++ S G P E E A E + ++ + S + T + ++ L+ +A+ +P F LT+++Q L+ A + L + +SV Q L TG+ S +H G + S D +V +L + ++ +D G + +LF D + S S+ S EK A L+A K Sbjct: 129 NYPSTSPGSLAKHICAICGD-RSSGKHYGVYSCEGCKGFFKRTIRKDLI--YTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAV----QEERQG----SRERSENEAESTSGGSEDMPVERILEAE---LAVEPKTEAYSDVNTESSTNDPVTNICHAADKQLFTLV--------EWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV----QDGILLATGLHVHRSSAHSAG------VGSIFD-------------RVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTK 410
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|1709262|sp|P51666.1|NR4A1_CANFA (RecName: Full=Nuclear receptor subfamily 4 group A member 1; AltName: Full=Orphan nuclear receptor HMR; AltName: Full=Orphan nuclear receptor NGFI-B) HSP 1 Score: 86.2705 bits (212), Expect = 2.184e-16 Identity = 69/218 (31.65%), Postives = 99/218 (45.41%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEF---HTGAASLSQ-REFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLAR 249 +PS +G C VC + HYG TC C+ FF+R++QK K + C DC + + R +CQ CRFQKCL VGM E+V TD+ K RR R L K K P++ +S ST + SKFQE H G ++F LL + R +A+ +P F L+ +Q L+++ +FL + R Sbjct: 258 GAPSGSEG--RCAVC----GDNASCQHYGVRTCEGCKGFFKRTVQKNAK--YICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR--LPSKPKQPPDASPANLLTSLVRAHLDSGPSTAKLD------------YSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLES---AFLELFILR 450
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|127819|sp|P22736.1|NR4A1_HUMAN (RecName: Full=Nuclear receptor subfamily 4 group A member 1; AltName: Full=Early response protein NAK1; AltName: Full=Nuclear hormone receptor NUR/77; Short=Nur77; AltName: Full=Orphan nuclear receptor HMR; AltName: Full=Orphan nuclear receptor TR3; AltName: Full=ST-59; AltName: Full=Testicular receptor 3) HSP 1 Score: 85.8853 bits (211), Expect = 2.556e-16 Identity = 75/249 (30.12%), Postives = 112/249 (44.98%), Query Frame = 0 Query: 25 DESQMSSMECQNSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEF---HTGAASLSQ-REFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARY-FMSVSGQEQLEWLFGTGI 268 D S+ +P +G C VC + HYG TC C+ FF+R++QK K + C DC + + R +CQ CRFQKCL VGM E+V TD+ K RR R L K K P++ +S ST + SKFQE H G ++F LL + R +A+ +P F L+ +Q L+++ +FL + R + S G+ +L +F +G+ Sbjct: 247 DTPVTSTKARSGAPGGSEG--RCAVC----GDNASCQHYGVRTCEGCKGFFKRTVQKNAK--YICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR--LPSKPKQPPDASPANLLTSLVRAHLDSGPSTAKLD------------YSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLES---AFLELFILRLAYRSKPGEGKL--IFCSGL 468
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|128911|sp|P12813.1|NR4A1_MOUSE (RecName: Full=Nuclear receptor subfamily 4 group A member 1; AltName: Full=Nuclear hormone receptor NUR/77; AltName: Full=Nuclear protein N10; AltName: Full=Orphan nuclear receptor HMR) HSP 1 Score: 85.5001 bits (210), Expect = 4.312e-16 Identity = 66/220 (30.00%), Postives = 106/220 (48.18%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARY-FMSVSGQEQLEWLFGTGI 268 C + D HYG TC C+ FF+R++QK+ K + C DC + + R +CQ CRFQKCL VGM E+V TD+ K RR R L K K Q P + ++ + +G + + S +L +F + G ++F LL + R +A+ +P F L +Q L+++ +FL + R + S G+ +L +F +G+ Sbjct: 270 CAVCGDNASCQ-HYGVRTCEGCKGFFKRTVQKSAK--YICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR--LPSKPK----QPPDASPTNLLTSLIRAHLDSGPSTAKLDYSKFQELVLPRFGKEDAGDV----QQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQDLLLES---AFLELFILRLAYRSKPGEGKL--IFCSGL 471
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|657600358|gb|AID52840.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 105.531 bits (262), Expect = 4.044e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 0 Query: 11 MDEAAFDDLLAMTSDESQMSSMECQNSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKK 140 MD A D L + S ME ++ SM+ C +C D +HYGA+TC+SC+AFFRR+ Q +F C G+C++ K R+KC+KCR++KC+ VGMK +VL+D +K +RF+K L+KK Sbjct: 1 MDPAMTDHL------DDGTSGMETEDV--SMEPTEECQICQ---DPAIRHLHYGAITCFSCKAFFRRTSQSKAYQKFMCKSTGECNVLHKLRKKCRKCRYEKCIRVGMKPSLVLSDEEKIKRFKKSLSKK 119
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 104.76 bits (260), Expect = 1.213e-19 Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFY 162 C I + IHYGA+TC+SCRAFFRRS+Q + C + +C+I ++R+ CQ CR+QKCL VGMK VL++ +++RRFRK + +H + P + P +D++ Sbjct: 41 CKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKV---RERHEANDLPQ---NHMPEDDYH 147
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 103.605 bits (257), Expect = 2.727e-19 Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 C + + +HYG++TC+SCRAFFRRS+Q + C + G C+I KSR+ CQKCR+++CL GMK VL++ ++ RRFRK KK + +++++ + G Sbjct: 88 CRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEG 190
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|61680752|pdb|1YNW|A (Chain A, Crystal Structure Of Vitamin D Receptor And 9-Cis Retinoic Acid Receptor Dna-Binding Domains Bound To A Dr3 Response Element) HSP 1 Score: 89.7373 bits (221), Expect = 7.954e-18 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 6 PRICGVC----GDRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCAANGDCRITKDNRRACQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 100
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1130267641|ref|XP_019771684.1| (PREDICTED: ecdysone receptor isoform X5 [Dendroctonus ponderosae]) HSP 1 Score: 97.4413 bits (241), Expect = 1.254e-17 Identity = 79/267 (29.59%), Postives = 120/267 (44.94%), Query Frame = 0 Query: 24 SDESQMSSMECQNSPSSMKG---------------PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ--KERRFRKFLAKKRK-HSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLG--------------------VLTL-LFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYF 251 SD S MS E + PSS+ G PR + ++ + + HY ALTC C+ FFRRS+ T+ ++C +CDI RRKCQ+CR +KCL VGM+ E V+ +TQ +R+ +K L K K +S + +G E G +STG + IS E L+ + F S+ + +L +LT+ L FA+ LP F L ++Q L+ A + + +AR + Sbjct: 81 SDTSSMSGREDLSPPSSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSI--TKNAVYQCKYGNNCDIDMYMRRKCQECRLKKCLTVGMRPECVVPETQCAVKRKEKKALKDKDKPNSTTNGSPTGVIKIEPELEGGEKSTGV----KPISPEQEELIHRLVYFQNAYEHPSEEDVNRILKQPMDDEDQREVRFRHITEITILTVQLIVEFAKQLPGFDKLLREDQIALLKACSSEVMMFRMARRY 341
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1016655160|ref|XP_016055595.1| (PREDICTED: nuclear receptor subfamily 1 group I member 2 [Miniopterus natalensis]) HSP 1 Score: 95.9005 bits (237), Expect = 2.759e-17 Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP C VC K H+ LTC C+ FFRR ++ R +C F+ G C+IT K+RR CQ CR +KCLE GMK EM+++D E+R KKR+ + +Q P++ Sbjct: 55 NTEEGDRGPHVCRVC----GDKATGYHFNVLTCEGCKGFFRRVMK--RNARLRCPFRKGTCEITQKTRRHCQACRLRKCLESGMKKEMIMSDAAVEQRRALIRRKKRERTGTQPPAA 165
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1191825065|ref|XP_020924197.1| (nuclear receptor subfamily 1 group I member 2 isoform X7 [Sus scrofa]) HSP 1 Score: 94.3597 bits (233), Expect = 2.878e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|21465790|pdb|1KB2|A (Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To Mouse Osteopontin (Spp) Response Element >gi|21465791|pdb|1KB2|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To Mouse Osteopontin (Spp) Response Element >gi|21465794|pdb|1KB4|A Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To A Canonical Direct Repeat With Three Base Pair Spacer (Dr3) Response Element >gi|21465795|pdb|1KB4|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To A Canonical Direct Repeat With Three Base Pair Spacer (Dr3) Response Element >gi|21465798|pdb|1KB6|A Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To Rat Osteocalcin (Oc) Response Element >gi|21465799|pdb|1KB6|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To Rat Osteocalcin (Oc) Response Element) HSP 1 Score: 88.1965 bits (217), Expect = 3.101e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 6 PRICGVC----GDRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 100
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1062848370|ref|XP_005675038.2| (PREDICTED: nuclear receptor subfamily 1 group I member 2, partial [Capra hircus]) HSP 1 Score: 95.9005 bits (237), Expect = 3.130e-17 Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 42 KGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ + +Q P + Sbjct: 75 EGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMKRNARP--RCPFRKGTCEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKRERTETQPPGA 179
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|108742553|gb|ABG01901.1| (pregnane X receptor [Sus scrofa] >gi|108742555|gb|ABG01902.1| pregnane X receptor [Sus scrofa]) HSP 1 Score: 95.5153 bits (236), Expect = 3.160e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126 The following BLAST results are available for this feature:
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold464_size163657:49488..51422- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold464_size163657-processed-gene-0.15 ID=snap_masked-scaffold464_size163657-processed-gene-0.15|Name=nuclear receptor subfamily 1 group i member 2-like|organism=Tigriopus kingsejongensis|type=gene|length=1935bp|location=Sequence derived from alignment at scaffold464_size163657:49488..51422- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor subfamily 1 group i member 2-like' has the following synonyms
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