nuclear receptor subfamily 1 group i member 2-like, snap_masked-scaffold464_size163657-processed-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 71.2478 bits (173), Expect = 5.146e-13 Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 43 GPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKR 141 G C VC + + HYGA++C C+ FF+RS++K + ++C DC++T R +CQ CR QKCL +GM+I + ++ R +++R Sbjct: 216 GIEACVVC----GDRASGRHYGAISCEGCKGFFKRSIRK--QLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRIMKQIYESYLAPRVSAVQSERR 308
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 69.707 bits (169), Expect = 1.003e-12 Identity = 54/225 (24.00%), Postives = 95/225 (42.22%), Query Frame = 0 Query: 38 PSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFYGLES------TGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYFMSVSG 256 P + +NC VC + HYGA +C C+ FFRRS++K R + C + C + R C+ CR + C++ GMK V + + +K AK +N ++ + D G +S G N I+ EN + S+ ++ ++ +A+ + F L+VD+Q L+ A+ L +A+ M+++G Sbjct: 142 PLAPNNIQNCAVC----GDRATGKHYGAASCDGCKGFFRRSVRKERV--YGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRISCRKKTSAKDMNSANELTV----TALLNADKVGQKSLLNSIVGGNINTNNFITEENVLANKQLASIEDIGHSMKEQ---------LIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSMNLNG 347
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 68.5514 bits (166), Expect = 2.110e-12 Identity = 66/266 (24.81%), Postives = 111/266 (41.73%), Query Frame = 0 Query: 45 RNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQK--ERRFRKFLAKKRKHSNSQEPSSGDSS-------CPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLGVLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYFMSVSGQEQLEWLFGTGISGSHEKGLLYYIPLQSYIDLYQVFSWTNPSGLK 301 R C VC + + HYG +C +C+AFF+R++Q E+ +C+I + R+ CQ CRFQKCL +GM E V D + +++R+ + + + D+ C E F N + R +S +F+ RE G + +A+ +P F +LT+++Q L+ ++ L L + +G+ L F S + GL + Q + YQ +T PS K Sbjct: 269 RTCLVCGDIA----SGFHYGVSSCEACKAFFKRTIQGNI--EYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESSPYIQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDMTLPNYKIRT-------ISTLSDFY-------NRELIGTI--------EWAKQIPGFSNLTINDQMKLLQSSWSEILVLSLVYRSLPYNGKISLTNNFSLDESQARLCGLSEFF-FQVWKPKYQCTKYT-PSTAK 504
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 68.1662 bits (165), Expect = 3.312e-12 Identity = 37/124 (29.84%), Postives = 62/124 (50.00%), Query Frame = 0 Query: 7 AALAMDEAAFDDLLAMTSDESQMSSMECQNSPSSMKGPR-------NCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMV 123 AA A+ +A + L + + ++ N+ SS+ P + ++ ++ K + HYG TC C++FF+R ++ R F+C C + R +CQ CRF+KCL +GMK E V Sbjct: 24 AASALYTSAANKLSVASMTKKELPDHHIVNNSSSLTAPSPSSGTNSSTEILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVR--RSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAV 145
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 67.0106 bits (162), Expect = 5.313e-12 Identity = 74/300 (24.67%), Postives = 123/300 (41.00%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSN-------------SQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLG--VLTLLFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYFMSVSGQEQLEWLFGTGIS--GSHEKGLLYYIPLQSYIDLYQVFSWTNPSGLKVFFDLSAALRRYDIDFGSTGSIAQCLLFTSD 332 C+I D + + HYG +C C+ FF+R+++K + C + DC I + R +CQ CR+ KCL+ GMK E V +E R R ++N S G P E E G E ++ + E L + G+ + + GL ++ L +A+ +P F L V++Q TLI + L LA F S+ + + GT ++ +HE G+ + +F +V +L A ++ +D G + +LF D Sbjct: 91 CSICGD-RASGKHYGVYSCEGCKGFFKRTVRKELT--YACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAV-----QEERHRGSNGPNHNNNNNNNNNNSRNSEEVESSTSGGGGDMPIERIIEAEDVG---EMKQDTSEFLLLDNNSSMSGGGSIGDMEIQRFGLAKKRIIHQLI-EWAKLVPHFSELKVEDQVTLIRGGWNELLVAGLA--FXSIKLNDGILLGNGTIVTRENAHEAGVGH------------IFD-------RVLVELIAKMKEMQMDKAELGCLRAIILFNPD 357
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 65.0846 bits (157), Expect = 3.530e-11 Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGM 118 C VC K + +HYG +TC C+ FFRRS ++ ++C + +C + +R +CQ CR QKCL +GM Sbjct: 47 CKVC----GDKSSGVHYGVITCEGCKGFFRRS--QSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 63.929 bits (154), Expect = 4.267e-11 Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 46 NCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMV 123 NC VC K + HYG TC C++FF+RS++ R ++C +C + R +CQ CR +KC ++GM+ E V Sbjct: 82 NCVVC----GDKSSGKHYGQFTCEGCKSFFKRSVR--RNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAV 153
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 63.929 bits (154), Expect = 8.908e-11 Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0 Query: 48 DVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMV 123 D+ ++ K + HYG TC C++FF+RS++ R ++C C I R +CQ CR +KC+++GM+ E V Sbjct: 431 DISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVR--RALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAV 504
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000006454 (supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8") HSP 1 Score: 62.003 bits (149), Expect = 1.193e-10 Identity = 37/97 (38.14%), Postives = 47/97 (48.45%), Query Frame = 0 Query: 47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRK--PEFKCFKVGD---------CDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERR 132 C VC ++ H HYGA C CRAFFRR +++ RK P C CDI+ R CQ CRF CL GM +VLTD + ++ Sbjct: 28 CRVCRVVEYQFH---HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDIS-LFRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 58.9214 bits (141), Expect = 1.895e-9 Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 0 Query: 47 CDVCTILIDTKHAS-IHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKK------RKHSNSQ 147 C VCT H+S HYG C C FF+RS+++ R K G C + R +C+ CR ++C++VGM + V Q ER R ++ ++HSN+ Sbjct: 34 CKVCT-----DHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAV----QHERGPRNSTLRRQMSLYFKEHSNNN 132
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|75065697|sp|Q8SQ01.1|NR1I2_MACMU (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 93.9745 bits (232), Expect = 3.013e-19 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPS 150 N+ + GP+ C VC K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E R KKR+ +Q P Sbjct: 30 NADEEVGGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMK--RNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEERRALIKRKKRERIGTQPPG 139
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|6093861|sp|O54915.1|NR1I2_MOUSE (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 91.6633 bits (226), Expect = 1.750e-18 Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 0 Query: 27 SQMSSMECQNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 S++ ++C+ + S+++ P N + +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+ R+ L K++K + P G Sbjct: 8 SRVGLVQCEEADSALEEPINVEEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQ--RRALIKRKKREKIEAPPPG 136
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|6093860|sp|O75469.1|NR1I2_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PAR1; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor; AltName: Full=Steroid and xenobiotic receptor; Short=SXR) HSP 1 Score: 91.6633 bits (226), Expect = 2.185e-18 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEP 149 N+ + GP+ C VC K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E R R + +K+ +P Sbjct: 30 NADEEVGGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMK--RNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDEAVEER-RALIKRKKSERTGTQP 137
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B) HSP 1 Score: 90.5077 bits (223), Expect = 3.990e-18 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK----HSNSQEPSSGD 153 PR C VC K H+ A+TC C+ FFRRS++ RK F C G C IT +RR CQ CR ++CL++GM E +LTD + +R +K L ++RK H +Q+P D Sbjct: 20 PRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQR--KKELIQRRKDEEAHREAQKPRLSD 125
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|3915243|sp|O42392.1|VDR_CHICK (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 88.5817 bits (218), Expect = 2.252e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 44 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 138
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|3915241|sp|O13124.1|VDR_XENLA (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.285e-17 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKR 141 PR C VC K H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ R+ + K++ Sbjct: 22 PRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFILTDEEVQRK-RQMINKRK 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|229557878|sp|Q9PTN2.2|VDRA_DANRE (RecName: Full=Vitamin D3 receptor A; Short=VDR-A; AltName: Full=1,25-dihydroxyvitamin D3 receptor A; AltName: Full=Nuclear receptor subfamily 1 group I member 1-A) HSP 1 Score: 88.1965 bits (217), Expect = 3.383e-17 Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 43 GPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK 142 PR C VC K H+ A+TC C+ FFRRS++ RK F C G+C IT +RR CQ CR ++C+++GM E +LTD + +R +K L KRK Sbjct: 52 APRICGVCG----DKATGFHFNAMTCEGCKGFFRRSMK--RKASFTCPFNGNCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQR--KKDLIMKRK 143
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|1352835|sp|P49701.1|VDR_COTJA (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 87.8113 bits (216), Expect = 3.492e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 41 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKAMFTCPFSGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 135
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|10720242|sp|Q9R1A7.1|NR1I2_RAT (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 87.4261 bits (215), Expect = 4.231e-17 Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0 Query: 35 QNSPSSMKGPRNCD-------VCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 + + S ++ P N D +C + D K H+ +TC C+ FFRR+++ R +C F+ G C+IT K+RR+CQ CR +KCLE GMK EM+++D E+ R+ L K++K + P G Sbjct: 16 EEADSVLEEPINVDEEDGGLQICRVCGD-KANGYHFNVMTCEGCKGFFRRAMK--RNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQ--RRALIKRKKREKIEAPPPG 136
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Match: gi|137618|sp|P13053.1|VDR_RAT (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 87.0409 bits (214), Expect = 6.047e-17 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRK 142 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ R+ + K+++ Sbjct: 21 PRICGVCG----DRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRK-REMIMKRKE 112
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|657600358|gb|AID52840.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 105.531 bits (262), Expect = 4.044e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 0 Query: 11 MDEAAFDDLLAMTSDESQMSSMECQNSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKK 140 MD A D L + S ME ++ SM+ C +C D +HYGA+TC+SC+AFFRR+ Q +F C G+C++ K R+KC+KCR++KC+ VGMK +VL+D +K +RF+K L+KK Sbjct: 1 MDPAMTDHL------DDGTSGMETEDV--SMEPTEECQICQ---DPAIRHLHYGAITCFSCKAFFRRTSQSKAYQKFMCKSTGECNVLHKLRKKCRKCRYEKCIRVGMKPSLVLSDEEKIKRFKKSLSKK 119
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 104.76 bits (260), Expect = 1.213e-19 Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSGDSSCPSEDFY 162 C I + IHYGA+TC+SCRAFFRRS+Q + C + +C+I ++R+ CQ CR+QKCL VGMK VL++ +++RRFRK + +H + P + P +D++ Sbjct: 41 CKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKV---RERHEANDLPQ---NHMPEDDYH 147
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 103.605 bits (257), Expect = 2.727e-19 Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 50 CTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSSG 152 C + + +HYG++TC+SCRAFFRRS+Q + C + G C+I KSR+ CQKCR+++CL GMK VL++ ++ RRFRK KK + +++++ + G Sbjct: 88 CRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEG 190
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|61680752|pdb|1YNW|A (Chain A, Crystal Structure Of Vitamin D Receptor And 9-Cis Retinoic Acid Receptor Dna-Binding Domains Bound To A Dr3 Response Element) HSP 1 Score: 89.7373 bits (221), Expect = 7.954e-18 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 6 PRICGVC----GDRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCAANGDCRITKDNRRACQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 100
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1130267641|ref|XP_019771684.1| (PREDICTED: ecdysone receptor isoform X5 [Dendroctonus ponderosae]) HSP 1 Score: 97.4413 bits (241), Expect = 1.254e-17 Identity = 79/267 (29.59%), Postives = 120/267 (44.94%), Query Frame = 0 Query: 24 SDESQMSSMECQNSPSSMKG---------------PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ--KERRFRKFLAKKRK-HSNSQEPSSGDSSCPSEDFYGLESTGFANEQRRISHENACLLSKFQEFHTGAASLSQREFQGLLG--------------------VLTL-LFRSFAQTLPEFRSLTVDEQTTLIDANKHSFLAYLLARYF 251 SD S MS E + PSS+ G PR + ++ + + HY ALTC C+ FFRRS+ T+ ++C +CDI RRKCQ+CR +KCL VGM+ E V+ +TQ +R+ +K L K K +S + +G E G +STG + IS E L+ + F S+ + +L +LT+ L FA+ LP F L ++Q L+ A + + +AR + Sbjct: 81 SDTSSMSGREDLSPPSSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSI--TKNAVYQCKYGNNCDIDMYMRRKCQECRLKKCLTVGMRPECVVPETQCAVKRKEKKALKDKDKPNSTTNGSPTGVIKIEPELEGGEKSTGV----KPISPEQEELIHRLVYFQNAYEHPSEEDVNRILKQPMDDEDQREVRFRHITEITILTVQLIVEFAKQLPGFDKLLREDQIALLKACSSEVMMFRMARRY 341
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1016655160|ref|XP_016055595.1| (PREDICTED: nuclear receptor subfamily 1 group I member 2 [Miniopterus natalensis]) HSP 1 Score: 95.9005 bits (237), Expect = 2.759e-17 Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP C VC K H+ LTC C+ FFRR ++ R +C F+ G C+IT K+RR CQ CR +KCLE GMK EM+++D E+R KKR+ + +Q P++ Sbjct: 55 NTEEGDRGPHVCRVC----GDKATGYHFNVLTCEGCKGFFRRVMK--RNARLRCPFRKGTCEITQKTRRHCQACRLRKCLESGMKKEMIMSDAAVEQRRALIRRKKRERTGTQPPAA 165
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1191825065|ref|XP_020924197.1| (nuclear receptor subfamily 1 group I member 2 isoform X7 [Sus scrofa]) HSP 1 Score: 94.3597 bits (233), Expect = 2.878e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|21465790|pdb|1KB2|A (Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To Mouse Osteopontin (Spp) Response Element >gi|21465791|pdb|1KB2|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To Mouse Osteopontin (Spp) Response Element >gi|21465794|pdb|1KB4|A Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To A Canonical Direct Repeat With Three Base Pair Spacer (Dr3) Response Element >gi|21465795|pdb|1KB4|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To A Canonical Direct Repeat With Three Base Pair Spacer (Dr3) Response Element >gi|21465798|pdb|1KB6|A Chain A, Crystal Structure Of Vdr Dna-Binding Domain Bound To Rat Osteocalcin (Oc) Response Element >gi|21465799|pdb|1KB6|B Chain B, Crystal Structure Of Vdr Dna-Binding Domain Bound To Rat Osteocalcin (Oc) Response Element) HSP 1 Score: 88.1965 bits (217), Expect = 3.101e-17 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 44 PRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKCFKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHS 144 PR C VC + H+ A+TC C+ FFRRS++ RK F C GDC IT +RR CQ CR ++C+++GM E +LTD + +R+ L +K + + Sbjct: 6 PRICGVC----GDRATGFHFNAMTCEGCKGFFRRSMK--RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEA 100
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|1062848370|ref|XP_005675038.2| (PREDICTED: nuclear receptor subfamily 1 group I member 2, partial [Capra hircus]) HSP 1 Score: 95.9005 bits (237), Expect = 3.130e-17 Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 42 KGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ + +Q P + Sbjct: 75 EGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAMKRNARP--RCPFRKGTCEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKRERTETQPPGA 179
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Match: gi|108742553|gb|ABG01901.1| (pregnane X receptor [Sus scrofa] >gi|108742555|gb|ABG01902.1| pregnane X receptor [Sus scrofa]) HSP 1 Score: 95.5153 bits (236), Expect = 3.160e-17 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 36 NSPSSMKGPRNCDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRKPEFKC-FKVGDCDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQKERRFRKFLAKKRKHSNSQEPSS 151 N+ +GP+ C VC K H+ +TC C+ FFRR++++ +P +C F+ G C+IT K+RR+CQ CR +KCLE GM+ EM+++D E+R KKR+ +Q P + Sbjct: 16 NADEEDEGPQICRVC----GDKATGYHFNVMTCEGCKGFFRRAIKRNARP--RCLFRKGACEITRKTRRQCQACRLRKCLESGMRKEMIMSDAAVEQRRALIRRKKREQIGAQPPGA 126 The following BLAST results are available for this feature:
BLAST of nuclear receptor subfamily 1 group i member 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear receptor subfamily 1 group i member 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold464_size163657:49488..51422- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold464_size163657-processed-gene-0.15 ID=snap_masked-scaffold464_size163657-processed-gene-0.15|Name=nuclear receptor subfamily 1 group i member 2-like|organism=Tigriopus kingsejongensis|type=gene|length=1935bp|location=Sequence derived from alignment at scaffold464_size163657:49488..51422- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor subfamily 1 group i member 2-like' has the following synonyms
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