nuclear hormone receptor, snap_masked-scaffold58_size443543-processed-gene-3.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 76.6406 bits (187), Expect = 1.773e-18 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 HYG ++CE CKGFFKR+++ + Y C ++ C + K R RC YCR QKCL +GM+ Sbjct: 197 HYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMK 252
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 74.7146 bits (182), Expect = 6.707e-18 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKD--CEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +HYG +C+GC GFFKRSIR+ Y C+ + C V K HRN+C+ CRL++C+ +GM D Sbjct: 44 KHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKD 104
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 72.4034 bits (176), Expect = 4.604e-17 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKD----CEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SC+GC GFFKRSI +Q Y C+ + C + K HRN+C+ CRL+KC M D Sbjct: 112 GDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKD 180
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 72.4034 bits (176), Expect = 5.046e-17 Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 HYG SCE CK FFKR+I+ + Y + +CE+ K R CQ CR QKCL MGM Sbjct: 282 HYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGM 336
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 69.707 bits (169), Expect = 3.884e-16 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 10 SLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRS 74 S T D HYGAI+C C+ FF+R++ Y C +K C +TK R CQ+CR KCL GM++ Sbjct: 67 SDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKN 131
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 66.2402 bits (160), Expect = 7.866e-15 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0 Query: 15 DRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 D HYG I+C C+ FF+RS+ K Y C ++ C +T R CQ+CR +KCL GM+ Sbjct: 100 DHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMK 158
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 65.4698 bits (158), Expect = 1.374e-14 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQ-CRGNKDCEVTKHHRNRCQYCRLQKCLAMGM-RSDCKY 78 H+GA +CEGCK FF R+ Q Q C+ N C V K +R C+ CRL+KC+ +GM +S +Y Sbjct: 68 HFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRY 130
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 65.0846 bits (157), Expect = 1.646e-14 Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 HYG SCE CKGFFKR+++ + Y C C VT R +C CR KCL +GM+ Sbjct: 166 HYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMK 221
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 62.3882 bits (150), Expect = 1.566e-13 Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0 Query: 28 KGFFKRSIRKQLGYQ-CRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +GFF+RSI++++ Y+ C N+ C + + +RNRCQYCRL+KC+A GM D Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRD 65
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 62.3882 bits (150), Expect = 1.813e-13 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRK--QLGYQC-RGNKD----CEVTKHHRNRCQYCRLQKCLAMGM 72 HYGAI+C C+ FF R++ K Q ++C RGN D C +TK R CQ+CR + CL+ GM Sbjct: 149 HYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|73620966|sp|Q24142.2|HR78_DROME (RecName: Full=Nuclear hormone receptor HR78; Short=dHR78; AltName: Full=Nuclear receptor XR78E/F; AltName: Full=Nuclear receptor subfamily 2 group D member 1) HSP 1 Score: 132.88 bits (333), Expect = 5.719e-37 Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L L GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG +CEVTKHHRNRCQ+CRLQKCLA GMRSD Sbjct: 51 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSD 120
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2) HSP 1 Score: 127.102 bits (318), Expect = 6.446e-35 Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGAISCEGCKGFFKRSIRK LGY CRGNKDC++ KH+RNRCQYCRLQKCL MGM+SD Sbjct: 91 GDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSD 155
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|57015416|sp|Q9N4B8.4|NHR41_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-41) HSP 1 Score: 121.709 bits (304), Expect = 6.539e-33 Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA+SCEGCKGFFKRSIRK++GY CR KDC VTK HRNRCQYCRL+KCL+MGMRS+ Sbjct: 151 LCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKDCPVTKFHRNRCQYCRLRKCLSMGMRSE 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|341942228|sp|Q505F1.3|NR2C1_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2; Short=mTR2) HSP 1 Score: 117.472 bits (293), Expect = 1.921e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75066579|sp|Q95K90.1|NR2C1_MACFA (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.701 bits (291), Expect = 3.103e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|81902145|sp|Q8VIJ4.1|NR2C1_RAT (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.286e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|226693548|sp|P13056.2|NR2C1_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.392e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75061946|sp|Q5RCZ5.1|NR2C1_PONAB (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.316 bits (290), Expect = 4.193e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 182
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|123892381|sp|Q28CK1.1|NR2C1_XENTR (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Developmental orphan receptor 2; Short=DOR2; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 115.931 bits (289), Expect = 7.556e-31 Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+A+GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCIALGMKQD 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|82201033|sp|Q6GN21.1|N2C1A_XENLA (RecName: Full=Nuclear receptor subfamily 2 group C member 1-A; AltName: Full=Developmental orphan receptor 2-A; Short=DOR2-A; Short=xDOR2-A; AltName: Full=Orphan nuclear receptor TR2-A; AltName: Full=Testicular receptor 2-A) HSP 1 Score: 115.546 bits (288), Expect = 8.949e-31 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+++GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCMSLGMKQD 220
BLAST of nuclear hormone receptor vs. nr
Match: gi|1339062313|ref|XP_023719796.1| (nuclear receptor subfamily 2 group C member 2 [Cryptotermes secundus] >gi|1330887827|gb|PNF21106.1| hypothetical protein B7P43_G05079 [Cryptotermes secundus]) HSP 1 Score: 136.732 bits (343), Expect = 2.962e-36 Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 28 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKKCEVTKHHRNRCQYCRLQKCLAMGMRSD 97
BLAST of nuclear hormone receptor vs. nr
Match: gi|1069708268|ref|XP_018312022.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X4 [Trachymyrmex zeteki] >gi|1069708271|ref|XP_018312023.1| PREDICTED: orphan steroid hormone receptor 2-like isoform X4 [Trachymyrmex zeteki]) HSP 1 Score: 135.961 bits (341), Expect = 4.469e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 106 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 170
BLAST of nuclear hormone receptor vs. nr
Match: gi|1068400225|ref|XP_018048039.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X6 [Atta colombica] >gi|1068400229|ref|XP_018048040.1| PREDICTED: orphan steroid hormone receptor 2-like isoform X6 [Atta colombica]) HSP 1 Score: 135.961 bits (341), Expect = 5.626e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 108 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 172
BLAST of nuclear hormone receptor vs. nr
Match: gi|1070607020|ref|XP_018401164.1| (PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X2 [Cyphomyrmex costatus] >gi|1070607022|ref|XP_018401166.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X2 [Cyphomyrmex costatus]) HSP 1 Score: 135.961 bits (341), Expect = 5.743e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 108 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 172
BLAST of nuclear hormone receptor vs. nr
Match: gi|1067107221|ref|XP_018013896.1| (PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X1 [Hyalella azteca]) HSP 1 Score: 137.887 bits (346), Expect = 5.863e-36 Identity = 60/72 (83.33%), Postives = 61/72 (84.72%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 L + GDR RHYGAISCEGCKGFFKRSIRKQLGY CR K CEVTKHHRNRCQYCRLQKCL MGMRSDCK Sbjct: 329 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYTCRNAKACEVTKHHRNRCQYCRLQKCLKMGMRSDCK 400
BLAST of nuclear hormone receptor vs. nr
Match: gi|749747363|ref|XP_011135802.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X7 [Harpegnathos saltator]) HSP 1 Score: 135.961 bits (341), Expect = 6.923e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 145 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 209
BLAST of nuclear hormone receptor vs. nr
Match: gi|1153703339|ref|XP_020284947.1| (orphan steroid hormone receptor 2 isoform X5 [Pseudomyrmex gracilis]) HSP 1 Score: 136.346 bits (342), Expect = 7.334e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 171 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 235
BLAST of nuclear hormone receptor vs. nr
Match: gi|1227984908|ref|XP_021924110.1| (LOW QUALITY PROTEIN: orphan steroid hormone receptor 2 [Zootermopsis nevadensis]) HSP 1 Score: 135.576 bits (340), Expect = 7.343e-36 Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 28 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 97
BLAST of nuclear hormone receptor vs. nr
Match: gi|1068400205|ref|XP_018048033.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X2 [Atta colombica]) HSP 1 Score: 136.346 bits (342), Expect = 8.808e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 190 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 254
BLAST of nuclear hormone receptor vs. nr
Match: gi|749747365|ref|XP_011135803.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator] >gi|749747367|ref|XP_011135804.1| PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator] >gi|749747371|ref|XP_011135806.1| PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator]) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 125 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 189 The following BLAST results are available for this feature:
BLAST of nuclear hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nuclear hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold58_size443543:330609..331203+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold58_size443543-processed-gene-3.1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1|Name=nuclear hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear hormone receptor' has the following synonyms
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