short chain dehydrogenase reductase family, snap_masked-scaffold6642_size3699-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000012625 (supercontig:LSalAtl2s:LSalAtl2s94:78040:78987:1 gene:EMLSAG00000012625 transcript:EMLSAT00000012625 description:"augustus_masked-LSalAtl2s94-processed-gene-0.5") HSP 1 Score: 98.2117 bits (243), Expect = 1.979e-24 Identity = 66/232 (28.45%), Postives = 114/232 (49.14%), Query Frame = 0 Query: 2 ELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKM----------MGG--KAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAG-ISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWL---ALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNE 217 +K I+++TG ASG G+++ ++ + GA I AG + ++ + G K Y D++ KD + ++ ++ + G ID+ +NAG IS + ++ D Q +++N+M+H W + ++P M R G+++N +S AGL+ Y +K AAVGL E + G+ IK S++CP T M G I M+ P V D ++ I E Sbjct: 35 SVKKDIVLITGGASGFGKSLAIKLLKLGANVIIIDVNKKAGDQTLVELEKIISTLPDQLRGFIKFYSCDLTKKDNLYTTLNQIKQNEGDIDILVNNAGVISGSSLLDTPDKKIQLTFDVNIMAHFWTIKSILPSMIRRRKGHIVNVASMAGLVGTNNLXDYCASKFAAVGLHEAMRGELFANGNDFIKCSLICPYFASTGMFAGVS---TGILPMLNPEEVTDKILDAILLE 263
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000010107 (supercontig:LSalAtl2s:LSalAtl2s667:334082:336289:1 gene:EMLSAG00000010107 transcript:EMLSAT00000010107 description:"maker-LSalAtl2s667-augustus-gene-2.21") HSP 1 Score: 88.1965 bits (217), Expect = 1.645e-20 Identity = 67/235 (28.51%), Postives = 110/235 (46.81%), Query Frame = 0 Query: 9 VVTGAASGIGRAMCLRYAEEGAAHIACVDRDI-----AGAEITAKMMGGKAYQV--DVSVKDQITGMIDAVEADAGPIDLFCSNAG-ISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAE--WLALTYGDQ--GIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYM 231 +VTGA +GIGR + + A GA +I C+D I AEI + K + V DVS K + ID ++ G ID+ +NAG + V+ + D ++I N++ +W R ++P M AR GY++ +S AG PY +K G+ E ++ L G++ GI + + P V T M + I + P A+ + +R +V P ++ Y+ Sbjct: 102 LVTGAGNGIGRQLAIELARNGA-NIVCLDFLINENEETSAEIKKQFPNIKTWTVTCDVSSKKDVKLAIDVIKKSVGDIDILINNAGTLCCKPFVQHDFDQIERIISTNLLGQLWVLRAILPQMIARDTGYVVAMASFAGHAGVPNMVPYTASKFGIKGMMEALFIELRQGNRAHGIHLMTVSPFLVDTGMIKNRRVRFPDILDIETPERAAEVIISNMRQGNAIVF-IPNILYYL 334
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000009478 (supercontig:LSalAtl2s:LSalAtl2s611:106938:108814:1 gene:EMLSAG00000009478 transcript:EMLSAT00000009478 description:"maker-LSalAtl2s611-augustus-gene-1.12") HSP 1 Score: 87.0409 bits (214), Expect = 2.785e-20 Identity = 56/229 (24.45%), Postives = 113/229 (49.34%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKM------MGGKAYQVDVSVKDQITGM---IDAVEADAGPIDLFCSNAGIS-VAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLAL----TYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNE 217 L ++ ++TGA G+GR + L+ + G + CVD + E T ++ +G +A+ D+SV ++ + I +E + GPI + +NAGI+ ++ ++ Q ++++NV+SH++ + +P G+L++ S AG + PY TK+A GL E L + Y + +K++ P + T + ++ ++ +M VA + +R + Sbjct: 49 LFGEVALITGAGGGLGRELSLQLTDLGVK-VICVDINKVSVEETCRITQKKGSLGSRAFVCDISVPKEVGDLVKKISLLEDELGPITMLFNNAGIAHCKPFLKHTNEEIQSLFQVNVISHMYLIKEYLPKFLDANKGHLVSIGSIAGSIGTANLVPYCSTKYAIRGLTESLFMELREMYPNTSVKMTTAHPYTISTSLIPKPKNRFNSLFPIMNACDVASNVIGAVRRD 276
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000009319 (supercontig:LSalAtl2s:LSalAtl2s595:50362:51363:-1 gene:EMLSAG00000009319 transcript:EMLSAT00000009319 description:"maker-LSalAtl2s595-augustus-gene-0.32") HSP 1 Score: 84.3445 bits (207), Expect = 1.045e-19 Identity = 59/194 (30.41%), Postives = 100/194 (51.55%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGV-EVEDDAWQKIWEINVMSHVWAARHLVP-LMAARGGGYLLNTSSAA----GLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGH 190 L K+ ++T AA GIGR L +A+EGA + D + A + + G +++DV+ K+ + D++ ID+ + AG G + + ++D+W++ +EINV S + + +VP ++ + GG ++N SS GL N+ YG TK A +G + LA I+V+ +CP V T RG Sbjct: 4 LDGKVALITAAAQGIGRETALLFAKEGA-KVYATDINEALLKELSNHEGISIFKLDVTNKEDVMNAKDSITES---IDILFNCAGYVHHGSILDCDEDSWKRSFEINVDSMYYMCKAIVPSMIENKKGGSIINMSSICSSIKGLPNRFA---YGTTKAAVIGFTKSLACDLVKHNIRVNCICPGTVDTPSLRGR 190
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000010112 (supercontig:LSalAtl2s:LSalAtl2s668:190059:194758:1 gene:EMLSAG00000010112 transcript:EMLSAT00000010112 description:"augustus_masked-LSalAtl2s668-processed-gene-1.1") HSP 1 Score: 67.3958 bits (163), Expect = 1.414e-13 Identity = 48/192 (25.00%), Postives = 95/192 (49.48%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKA-------YQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVE-VEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEM 186 L K+ ++TGA+SGIGR+ + +A+ GA ++ RDI + TAK G+ Q + +++ + +++ G +D+ +NAGI G +E +++ ++ INV S V+ L + G ++N SS G+ + G Y ++K A + +AL + ++V+ + P + + + Sbjct: 4 LGGKVALITGASSGIGRSTAILFAKLGAT-LSITGRDIENLQKTAKECEGQGGTSAPLLIQASLDIEEDVKRVVEETINRFGRLDILVNNAGILERGSIENTSLESYDRVMNINVRS-VFQTTSLATPHLIKTKGNIVNVSSVNGIRSFPGVLAYNMSKSALDQFTKCIALELAPKNVRVNSVNPGVIISNL 193
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000008317 (supercontig:LSalAtl2s:LSalAtl2s503:424275:425910:1 gene:EMLSAG00000008317 transcript:EMLSAT00000008317 description:"maker-LSalAtl2s503-augustus-gene-4.14") HSP 1 Score: 65.4698 bits (158), Expect = 7.898e-13 Identity = 55/196 (28.06%), Postives = 99/196 (50.51%), Query Frame = 0 Query: 6 KIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKA--YQVDVSVKDQITGMIDAVEADAGP--IDLFCSNAGISVAGGV-EVEDDAWQKIWEINVMSHV----WAARHLVPLMAARGGGYL--LNTSSAAGLLNQIGSAPYGVTKHAAVGLAEW----LALTYGDQGIKVSVLCPQAVRTEM 186 K+ ++TGA+SGIG A+ R A +G + C R EI ++ G+ Y+ D++ + ++ M D V+ D P + + +NAG S+ G+ E + W+K+ ++N++S +A ++ +G G + LN+ SA + + YGVTK A LA + + Y + I + +CP V+T+ Sbjct: 5 KVALITGASSGIGAAVLRRLASKGFIVVGCARRVELIEEIASEFPSGRVFPYKCDITSESELKTMFDWVK-DKFPETLRIVFANAGCSIDKGLMEGDFTTWRKLMDVNLISPSALTQYAIKYWTDKSPEKGYGKIVYLNSLSAHVRVFRDILRFYGVTKDALNSLARYWRDEVKEKYPNHSICIGEICPGLVKTDF 199
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000002347 (supercontig:LSalAtl2s:LSalAtl2s1446:53993:55015:-1 gene:EMLSAG00000002347 transcript:EMLSAT00000002347 description:"maker-LSalAtl2s1446-augustus-gene-0.15") HSP 1 Score: 60.4622 bits (145), Expect = 4.031e-11 Identity = 59/221 (26.70%), Postives = 96/221 (43.44%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGK--AYQ-VDVSVKDQITGMIDAVEADAGPIDLFCSNAGISV---------AGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAAR------GGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGP 205 LK + VTG ASG+GRA R+ EGA + VD + A+ +G + +Q VD++ +Q+ ++A + G + + AGI+V A +ED + K+ +N + R +A G ++NT+S A Q G A Y +K A VG+ +A GI+V+ + P T + +G + V P P Sbjct: 2 LKGVVGFVTGGASGLGRATVERFVREGA-KVTLVDLPSSEGHKIAQKLGHENCLFQPVDITSPEQVHNALEATRSQFGYLSAVVNCAGIAVGFVTYNHTKATSHGLED--FAKVINVNTIGTFNVIRLAAAQIAKNEPDADNQRGVIINTASVAAYEGQRGQAAYSASKGAVVGMTLPIARDLASIGIRVNTIAPGLFDTPLLKGLPEKVRKYLAKTVPNP 219
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Match: EMLSAG00000006436 (supercontig:LSalAtl2s:LSalAtl2s351:628352:636975:-1 gene:EMLSAG00000006436 transcript:EMLSAT00000006436 description:"maker-LSalAtl2s351-augustus-gene-6.26") HSP 1 Score: 55.4546 bits (132), Expect = 4.466e-9 Identity = 62/221 (28.05%), Postives = 100/221 (45.25%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITA---KMMGGKA--YQVDVSVKDQITGMIDAVEAD-AGPIDLFCSNAGISVAGGVE--VED------------DAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRT-EMTRGHEDHVAAINGM 200 M L K+ VVTGA+ GIGR + ++ GA + R + + TA K GG Q+D S ++I G+ + + + G +DL +NA GGV+ +E+ W KI + + H + +M + G ++N SS G + + + PYGV K A+ + A + + L P AV+T EMT+ D+ A G+ Sbjct: 368 MSLSGKVCVVTGASRGIGRGIAVQVGGAGAT-VYITGRSNSDLQKTADEIKSRGGNPIMIQMDHSNDEEILGLFNRIRHEQKGKLDLLVNNA----FGGVKMIIENFGKNFWEALSPVQMWDKINGVGLRDHYICTSYASRIMQSNRSGLIVNVSSGGG-IKYVLNVPYGVGKAASDRMVADCAHELKKCNVAMVSLWPGAVKTEEMTKYVIDNPGASAGL 582 HSP 2 Score: 53.1434 bits (126), Expect = 2.704e-8 Identity = 50/202 (24.75%), Postives = 87/202 (43.07%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHI----ACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADA-GPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVM------------SHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTE 185 M L K+ +VTGA+ GIG+ + ++ GA + D + EI ++ Q+D S + I + + V + G +DL +NA +G + ++ +K WE++ + +H + +M G ++N SSA G + I + YGV K +A A+ I + L P V+TE Sbjct: 662 MSLAGKVCIVTGASRGIGKGIAVQLGGSGATVYITGRSNTDLKLTANEIKSRGGNPIVVQMDHSRDEDIERLFNRVRNEQNGKLDLLVNNA---YSGVKSIMENHGKKFWEVSPLEVWDSINGVGLRNHYICTSYAAKIMQLNRSGLIINVSSAGG-VKYIFNVAYGVGKEGCDRMAADCAIELQSNNIAMISLWPGPVKTE 859
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|74750974|sp|Q8N3Y7.2|RDHE2_HUMAN (RecName: Full=Epidermal retinol dehydrogenase 2; Short=EPHD-2; Short=RDH-E2; AltName: Full=Retinal short-chain dehydrogenase reductase 2; Short=retSDR2; AltName: Full=Short-chain dehydrogenase/reductase family 16C member 5) HSP 1 Score: 107.842 bits (268), Expect = 1.504e-26 Identity = 72/237 (30.38%), Postives = 123/237 (51.90%), Query Frame = 0 Query: 6 KIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGG------KAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGG--VEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWL---ALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYM 231 +I+++TGA SG+GR + L++A G+ + D + G E T KM AY D S K+ + + D V+ + G + + +NAGI V G ++ D+ +K +++N +H+W + +P M A G+L+ SS+AGL G A Y +K AA G AE + +GIK +++CP ++T M G ++ ++EP + VE I E + L P+++ +M Sbjct: 41 EIVLITGAGSGLGRLLALQFARLGSV-LVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDVSILINNAGI-VTGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKYAVEKIVEAILQEK-MYLYMPKLLYFM 274
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|1352911929|sp|C8WGQ3.1|3BHD2_EGGLE (RecName: Full=3-beta-hydroxycholanate 3-dehydrogenase (NAD(+)) 2; AltName: Full=NAD-dependent bile acid 3-beta-dehydrogenase; AltName: Full=Nicotinamide-dependent 3-beta-hydroxysteroid dehydrogenase; Short=Nicotinamide-dependent 3-beta-HSDH) HSP 1 Score: 103.219 bits (256), Expect = 3.196e-25 Identity = 65/194 (33.51%), Postives = 108/194 (55.67%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKM--MGGK--AYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGI--SVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARG-GGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRG 189 L + V+TG ASGIG+++ R+ E GA+ +A + A A + ++ G K +VDVS +D + GM+D G +D+ +NAGI ++ E++DD W+++ ++N+ S ++ R V RG GG ++NT+S +GL G Y +K A VGL + +A Y D GI+ + +CP +T + G Sbjct: 10 LAGQTAVITGGASGIGKSIVQRFLEAGASCLAADLNEEALAALKQELAEYGDKLDVVKVDVSNRDDVEGMVDRAVQTFGQMDIIVNNAGIMDNLLPIAEMDDDVWERLMKVNLNSVMYGTRKAVRYFMERGEGGVIINTASLSGLCAGRGGCAYTASKFAVVGLTKNVAFMYADTGIRCNAICPGNTQTNIGVG 203
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|1352911930|sp|A7AZH2.1|3BHDP_RUMGV (RecName: Full=3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)); AltName: Full=NADP-dependent bile acid 3-beta-dehydrogenase; AltName: Full=Nicotinamide-dependent 3-beta-hydroxysteroid dehydrogenase; Short=Nicotinamide-dependent 3-beta-HSDH) HSP 1 Score: 102.449 bits (254), Expect = 7.514e-25 Identity = 70/192 (36.46%), Postives = 105/192 (54.69%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMM--GGKA--YQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGV--EVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTR 188 +KI++VTGA SGIGRA+ +R A+EGA +A + GA + A M GGK + DVS KD + + ++ G +D+ +NAGI A E+EDD W ++ + N+ S + R V LM GG ++N SS AG+ +A Y +KHA GL + +A+ Y +GI + +CP T +T Sbjct: 11 FDEKIMLVTGATSGIGRAVAIRAAKEGATVVAVGRNEERGAAVVAAMEEAGGKGEFMKCDVSNKDAVKALFAEIQEKYGKLDVAVNNAGIVGASKTVEELEDDDWFQVIDANLNSCFFCCREEVKLMQPSGGA-IVNVSSVAGMRGFPSAAAYVASKHAVSGLTKAVAVDYATKGITCNAICPAGTDTPLTE 201
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|81894611|sp|Q7TQA3.1|RDHE2_MOUSE (RecName: Full=Epidermal retinol dehydrogenase 2; Short=EPHD-2; Short=RDH-E2; AltName: Full=Retinal short-chain dehydrogenase reductase 2; Short=retSDR2; AltName: Full=Short-chain dehydrogenase reductase 9; AltName: Full=Short-chain dehydrogenase/reductase family 16C member 5) HSP 1 Score: 100.523 bits (249), Expect = 7.373e-24 Identity = 66/235 (28.09%), Postives = 119/235 (50.64%), Query Frame = 0 Query: 6 KIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEI--TAKMMGG---KAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVA-GGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWL---ALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYM 231 +I+++TGA SG+GR + L++A GA + A E A+ G AY D S ++++ + D V+ + G + + +NAGI ++ DD +K +++N +H+W + +P M A G+L+ SS+AGL+ G + Y +K AA+G AE + L GIK +++CP ++T M G + +++P ++ I E L L P+ + ++ Sbjct: 41 EIVLITGAGSGLGRLLALQFARLGAVLVLWDVNKEANDETHQLAREAGAARVHAYTCDCSRREEVYRVADQVKKEVGDVSILINNAGIVTGRNFLDCPDDLMEKSFDVNFKAHLWMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFAALGFAESMFIETLAKKQWGIKTTIVCPFFIKTGMFEGCTTKCPTLLPILDPEYAVRKIIDAILQEQ-LYLYMPKFLYFI 274
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|81669157|sp|O34782.1|YVRD_BACSU (RecName: Full=Uncharacterized oxidoreductase YvrD) HSP 1 Score: 97.8265 bits (242), Expect = 4.272e-23 Identity = 63/192 (32.81%), Postives = 99/192 (51.56%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIA------CVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGI-SVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTE 185 ++LK+K++++TG+ SGIG+A + +EGAA I VDR I + G A D+S D+ I+ V + G ID+ +N G V +V D+ W + +E+NVMS V +RH +P M A+ G +LN +S AG+ PY +TK A + L+ +A + V+ + P TE Sbjct: 3 LQLKEKLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEELSGYGTVHGAAA---DLSKTDEAAAFIEKVN-EIGDIDILVNNLGFFEVKDFADVTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTE 190
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|6831715|sp|Q9WYG0.1|Y325_THEMA (RecName: Full=Uncharacterized oxidoreductase TM_0325) HSP 1 Score: 92.0485 bits (227), Expect = 3.818e-21 Identity = 61/189 (32.28%), Postives = 98/189 (51.85%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVD-RDIAGAEITA--KMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVE-VEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTE 185 M + K++++TGA SGIG+ + +AE GA +A D + G E K MGG+A + V ++ G +D+ +NAGI G +E ++ + K +NV +++ V M +GGG ++N SS AGL+ Y V+K A +GL LA+ Y D GI+V+ +CP ++E Sbjct: 1 MNFQGKVVLITGAGSGIGKKAAVMFAERGA-KVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQIVKKTVETFGRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSE 188
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|254763381|sp|P42317.2|YXJF_BACSU (RecName: Full=Uncharacterized oxidoreductase YxjF) HSP 1 Score: 92.0485 bits (227), Expect = 4.132e-21 Identity = 56/193 (29.02%), Postives = 99/193 (51.30%), Query Frame = 0 Query: 3 LKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKM----MGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGIS-VAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGH 190 ++ ++ +VTGAA GIG + +A EGA+ I R A + +K+ A DV+ + Q+ ++ ++ G +D+ +NAGI VA E D ++++ ++ + + A +H+ P+M + G ++N +S GL+ G + Y KH +GL + AL GI V+ LCP V T++ R Sbjct: 1 MRKQVALVTGAAGGIGFEIAREFAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQKQYGRLDILVNNAGIQHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQ 193
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|123795786|sp|Q05A13.1|S16C6_MOUSE (RecName: Full=Short-chain dehydrogenase/reductase family 16C member 6) HSP 1 Score: 92.8189 bits (229), Expect = 6.245e-21 Identity = 63/229 (27.51%), Postives = 111/229 (48.47%), Query Frame = 0 Query: 6 KIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGK------AYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGG-VEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYG---DQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNE-TFLVLP 223 +I+++TGA SG+GR + + +A GA + D + G T +++ K AY+ D S + ++ + D V+ + G + + +NAG+ + D +K + +N +SH W + +P M G+L+ SS AGL+ G + Y +K AA G AE L L +K +++CP ++T M G + ++E VA I E +L++P Sbjct: 37 EIVLITGAGSGLGRLLAIHFASHGAT-LVLWDINQEGNMETCRLVKQKGDVKVFAYKCDCSSRIEVYRVADQVKEEVGDVTILINNAGVVTGKSFLNTPDHLVEKSFLVNAISHFWTCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYSSSKFAAFGFAESLFLELTMIMKTKVKSTIVCPYFIKTGMFEGCTTKYPLLLPLLEQEYVAQKIFNAILEEQVYLIIP 264
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|77416416|sp|Q5M875.1|DHB13_RAT (RecName: Full=17-beta-hydroxysteroid dehydrogenase 13; Short=17-beta-HSD 13; AltName: Full=Short-chain dehydrogenase/reductase 9; Flags: Precursor) HSP 1 Score: 91.6633 bits (226), Expect = 1.282e-20 Identity = 67/226 (29.65%), Postives = 110/226 (48.67%), Query Frame = 0 Query: 8 IVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITA---KMMGG--KAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAG-ISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLAL---TYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETI-RNETFLVLP 223 +++TGA GIGR +A++ + + D G E TA + +G + VD S + +I +D V+ + G I++ +NAG I A + +D+ K +E+N++ H W + L+P M R G+++ +S G PY +K AAVG L T G GIK S LCP V T T+ + + +EP VA + ++ I N+ + +P Sbjct: 39 VLITGAGHGIGRLTAYEFAKQ-KSRLVLWDISKHGVEETAAKCRKLGAVVHVFVVDCSNRAEIYKSVDQVKKEVGDIEIVVNNAGAIYPADLLSTKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNTGFTKNPSTRLWPV---LEPDEVARSLIDGILTNKKMIFVP 260
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Match: gi|403377902|sp|F1SWA0.1|ZERSY_ZINZE (RecName: Full=Zerumbone synthase) HSP 1 Score: 90.8929 bits (224), Expect = 1.726e-20 Identity = 60/196 (30.61%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVD-RDIAGAEITAKMMGGK---AYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVED---DAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVT--KHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMT 187 M L+ K+ +VTG ASGIG ++ + E GA I VD +D G +++ ++ G + DV+V+D + +D G ID+ +NAGI+ +++ D + ++K+++INV +H +M + G +++ +S + ++ G+ P+G T KHA VGL + +A G GI+V+ + P AV T ++ Sbjct: 1 MRLEGKVALVTGGASGIGESIARLFIEHGAK-ICIVDVQDELGQQVSQRLGGDPHACYFHCDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIVSLASVSSVI--AGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVNCVSPYAVPTRLS 193
BLAST of short chain dehydrogenase reductase family vs. nr
Match: gi|1225932416|ref|WP_093925684.1| (KR domain-containing protein [Sulfitobacter dubius] >gi|1097438250|emb|SFG17844.1| Short-chain dehydrogenase [Sulfitobacter dubius]) HSP 1 Score: 393.66 bits (1010), Expect = 1.787e-136 Identity = 189/256 (73.83%), Postives = 217/256 (84.77%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYMRNKTDNYDKWIGGMRKLNRRFGSFD 256 M+L ++IV+TGAASGIGRAM LR+AEE AH+ CVD D GAE TA +GG ++VDV+ + +I +I+ VE D GPIDLFCSNAGISV GGVEV D WQ+IWEINVMSHV AARHLVPLM ARGGGYLLNT+SAAGLLNQ+G+APYGVTKHAAVGLAEWLA+TYGD GIKVSVLCPQAVRTEM RG EDHVAAI+GM+EP PVADACV+ IRNE FLVLPHP+V Y++ K +YD+WIGGMRKLNRRFG+ D Sbjct: 1 MDLAGRVIVITGAASGIGRAMALRFAEESPAHLVCVDIDGPGAEATAAEVGGTGFRVDVAHEVEIAQLIETVERDIGPIDLFCSNAGISVEGGVEVPDADWQRIWEINVMSHVRAARHLVPLMRARGGGYLLNTASAAGLLNQVGAAPYGVTKHAAVGLAEWLAMTYGDDGIKVSVLCPQAVRTEMMRGLEDHVAAIDGMLEPEPVADACVQAIRNEVFLVLPHPQVRDYIQGKAQDYDRWIGGMRKLNRRFGTPD 256
BLAST of short chain dehydrogenase reductase family vs. nr
Match: gi|494188872|ref|WP_007120512.1| (SDR family NAD(P)-dependent oxidoreductase [Oceanibulbus indolifex] >gi|161379499|gb|EDQ03913.1| oxidoreductase, short chain dehydrogenase/reductase family protein [Oceanibulbus indolifex HEL-45]) HSP 1 Score: 393.66 bits (1010), Expect = 1.867e-136 Identity = 188/256 (73.44%), Postives = 218/256 (85.16%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYMRNKTDNYDKWIGGMRKLNRRFGSFD 256 MEL+ ++IV+TGAASGIGRA+ LR+A+E AHI CVD D AG E TA +GG A++VDVS + +I +I VE D GPIDLFCSNAGIS+ GGVEV D WQ+IWEINVMSHV AARHLVPLM ARGGGYLLNT+SAAGLLNQ+G+APYGVTKHAAVGLAEWLA+TYGD GIKVSVLCPQAVRTEM RG EDHVAAI+GM+EP PVA+ACV+ IR+E FLVLPHP+V Y++ K +YD+WIGGMRKLNRRFG+ D Sbjct: 1 MELQGRVIVITGAASGIGRALALRFAQEAPAHIVCVDIDGAGTEATAAKVGGTAFRVDVSSEAEIATLIAEVERDIGPIDLFCSNAGISIEGGVEVPDADWQRIWEINVMSHVRAARHLVPLMRARGGGYLLNTASAAGLLNQVGAAPYGVTKHAAVGLAEWLAMTYGDDGIKVSVLCPQAVRTEMMRGLEDHVAAIDGMLEPEPVAEACVQAIRDEVFLVLPHPQVRDYIQGKARDYDRWIGGMRKLNRRFGTPD 256
BLAST of short chain dehydrogenase reductase family vs. nr
Match: gi|653008866|ref|WP_027261026.1| (SDR family NAD(P)-dependent oxidoreductase [Sedimentitalea nanhaiensis] >gi|1098142532|emb|SFT69136.1| NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Sedimentitalea nanhaiensis]) HSP 1 Score: 393.275 bits (1009), Expect = 2.696e-136 Identity = 181/254 (71.26%), Postives = 223/254 (87.80%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYMRNKTDNYDKWIGGMRKLNRRFGS 254 MELKDKI+VVTGAASGIG+++ +R+A+EGAA + C D D++GA+ TA + G A V+V V+D+I +ID VE +AGPIDLFCSNAGI +AGG+EV ++ WQ+IW+INVMSH+WAARHLVP M ARGGGYLLNTSSAAGLLNQ+G APYGVTKHAAV +AEWLA+T+GD+GIKVSVLCPQAVR+EMTRGHED VAA++GM+EP VA+ACV+TIRNETFLVLPHPEV+ Y+R K NYD+W+GGMRKLNR++G+ Sbjct: 1 MELKDKIVVVTGAASGIGKSLAIRFADEGAARVVCADLDVSGAQQTASQINGLAIAVNVGVEDEIKALIDRVEEEAGPIDLFCSNAGILIAGGMEVPNEDWQRIWDINVMSHIWAARHLVPRMIARGGGYLLNTSSAAGLLNQVGCAPYGVTKHAAVAVAEWLAMTHGDEGIKVSVLCPQAVRSEMTRGHEDSVAALDGMLEPEIVAEACVQTIRNETFLVLPHPEVLDYIRLKAGNYDRWLGGMRKLNRKYGN 254
BLAST of short chain dehydrogenase reductase family vs. nr
Match: gi|497516868|ref|WP_009831066.1| (SDR family NAD(P)-dependent oxidoreductase [Rhodobacteraceae bacterium HTCC2083] >gi|206679765|gb|EDZ44252.1| oxidoreductase, short chain dehydrogenase/reductase family [Rhodobacteraceae bacterium HTCC2083]) HSP 1 Score: 392.119 bits (1006), Expect = 7.570e-136 Identity = 187/253 (73.91%), Postives = 216/253 (85.38%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYMRNKTDNYDKWIGGMRKLNRRFG 253 MELKDKI VVTGAASGIG+A+C +A EGA H+ CVD + GAE TAK +GG A++VDVS + QIT MIDAVEAD GPIDLF SNAGI+V GG+E + WQ+ W+INVM+HVWAAR L PLMA+RGGGYLLNT+SAAGLLNQ+GSA YGVTKHAAVGLAEW+A+T+GD+GIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEP A ACV+ IR ETFL+ PH EV+ Y++NK DNYD+WIGGMRKLNR +G Sbjct: 1 MELKDKICVVTGAASGIGKALCEAFANEGAKHVVCVDMNANGAEATAKDVGGTAFKVDVSDEAQITAMIDAVEADIGPIDLFFSNAGIAVGGGMETPNVDWQRTWDINVMAHVWAARKLAPLMASRGGGYLLNTASAAGLLNQVGSASYGVTKHAAVGLAEWIAMTHGDEGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPDVCAQACVDVIRAETFLITPHVEVIDYIKNKADNYDRWIGGMRKLNRLYG 253
BLAST of short chain dehydrogenase reductase family vs. nr
Match: gi|1279587021|ref|WP_100162427.1| (SDR family NAD(P)-dependent oxidoreductase [Pseudooceanicola lipolyticus] >gi|1278969835|gb|PJE36765.1| short-chain dehydrogenase [Pseudooceanicola lipolyticus]) HSP 1 Score: 391.734 bits (1005), Expect = 1.250e-135 Identity = 189/253 (74.70%), Postives = 215/253 (84.98%), Query Frame = 0 Query: 1 MELKDKIIVVTGAASGIGRAMCLRYAEEGAAHIACVDRDIAGAEITAKMMGGKAYQVDVSVKDQITGMIDAVEADAGPIDLFCSNAGISVAGGVEVEDDAWQKIWEINVMSHVWAARHLVPLMAARGGGYLLNTSSAAGLLNQIGSAPYGVTKHAAVGLAEWLALTYGDQGIKVSVLCPQAVRTEMTRGHEDHVAAINGMMEPGPVADACVETIRNETFLVLPHPEVVQYMRNKTDNYDKWIGGMRKLNRRFG 253 MELKDKIIVVTGAASGIG+AM R+A EGA + C D ++ AE TA+ + G A +VDVS +DQI G+ID VE + GPIDLFCSNAGI GG EV + WQ+IWE+NVMSHVWAARHLVP MAARGGGYLLNT+SAAGLLNQ+GSAPYGVTKHAAVGLAEWLAL++GD+GIKVSVLCPQAVR+EMTRGHED VAAI+GM+EP VADACV IR ETFLVLPHPEV YMRNK ++YD+WIGGMRKLNR +G Sbjct: 1 MELKDKIIVVTGAASGIGKAMAARFAAEGAKQVICADLNLKDAEKTAREVKGIAAEVDVSREDQIAGLIDWVEREVGPIDLFCSNAGILTLGGTEVANADWQRIWEVNVMSHVWAARHLVPRMAARGGGYLLNTASAAGLLNQVGSAPYGVTKHAAVGLAEWLALSHGDEGIKVSVLCPQAVRSEMTRGHEDGVAAIDGMLEPEVVADACVAAIRAETFLVLPHPEVRSYMRNKAEDYDRWIGGMRKLNRAYG 253 The following BLAST results are available for this feature:
BLAST of short chain dehydrogenase reductase family vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 8
BLAST of short chain dehydrogenase reductase family vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of short chain dehydrogenase reductase family vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold6642_size3699:1158..1931+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold6642_size3699-processed-gene-0.1 ID=snap_masked-scaffold6642_size3699-processed-gene-0.1|Name=short chain dehydrogenase reductase family|organism=Tigriopus kingsejongensis|type=gene|length=774bp|location=Sequence derived from alignment at scaffold6642_size3699:1158..1931+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'short chain dehydrogenase reductase family' has the following synonyms
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