GI11566, snap_masked-scaffold80_size398941-processed-gene-2.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 215.698 bits (548), Expect = 4.013e-64 Identity = 91/104 (87.50%), Postives = 97/104 (93.27%), Query Frame = 0 Query: 26 KIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQG 129 K + +DPMQNQLCRVC EPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRC ++KKNRT CKACRLRKC++VGMSKSGSRYGRRSNWFKIHCLMQQ G Sbjct: 45 KFEAMDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRYGRRSNWFKIHCLMQQNLG 148
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 178.333 bits (451), Expect = 5.323e-53 Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = 0 Query: 31 DPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTC--NNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLM 124 DPM+NQ+CRVC EPAAG+HFGAFTCEGCKSFFGRTC +N + I ECKNNY C I+KKNRT+CKACRLRKCL VGMSK+GSRYGRRSNWFK+HC+M Sbjct: 31 DPMRNQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVM 126
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 85.8853 bits (211), Expect = 9.407e-18 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 32 PMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 P Q+ +C +C + A G H+G TCEGCK FF RT N+ I C + CEINK R C+ CR +KCL GM + R R Sbjct: 277 PQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKR-IYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDR 357
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 83.5741 bits (205), Expect = 2.969e-17 Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 37 LCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSN 116 LC VC + ++G H+G FTCEGCKSFF R C +S+ +C++ C +++ +R C+ CR +KCL +GM K + GR + Sbjct: 74 LCVVCGDKSSGKHYGQFTCEGCKSFFKR-CVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGRTTT 152
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 81.6481 bits (200), Expect = 6.558e-17 Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 0 Query: 8 HHISHPHLSP-----FGSPFDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 HHIS +SP + + K +L + C VC + ++G H+G FTCEGCKSFF R+ +++ +C+ + C +++ +R C+ CRL+KC +GM + + GR Sbjct: 48 HHISSDSISPAISSGIVASIEHAKPSELSESSDINCVVCGDKSSGKHYGQFTCEGCKSFFKRSV-RRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGR 157
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 82.0333 bits (201), Expect = 9.113e-17 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 27 IDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 I K + Q + C VC + A+GFH+G +CE CK+FF RT +N CEINK+ R C+ACR +KCL +GM K G R R Sbjct: 260 IIKEEEGQRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASN-ECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 345
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 80.4925 bits (197), Expect = 5.375e-16 Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 0 Query: 27 IDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 I K + Q+ C VC + ++G H+G FTCEGCKSFF R+ +++ +C+ + C I++ +R C+ CRL+KC+ +GM K + GR Sbjct: 423 IIKDENGQDISCVVCGDKSSGKHYGQFTCEGCKSFFKRSV-RRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGR 508
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 79.7221 bits (195), Expect = 5.440e-16 Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 28 DKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR-------------RSNWFKIHCLMQQQQGNGPSISGP 137 D D M+ +LC VC + +G+H+G TCE CK FF RT N+ V C + C I+K R C CR +KCL VGM R+ R R K+ L Q+Q +G GP Sbjct: 177 DSKDGME-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY-TCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVIHGGVSMGP 297
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 80.1073 bits (196), Expect = 6.425e-16 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGM 104 C VC + A+G H+GA +CEGCK FF R+ Q Q C+ N CE+ K +R C+ CRL+KCL +GM Sbjct: 220 CVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQ-CRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285
BLAST of GI11566 vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 77.0258 bits (188), Expect = 2.486e-15 Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 1 MFGAPNPHHISHPHLSP-FGSPFDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCN-NQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 M P H S PH SP FG+ QT L + C+VC++ ++G H+G F C+GC FF R+ N+ + + K+ C ++K +R C+ACRL++C+ VGM+K ++ R Sbjct: 1 MLFQPQLH--SPPHSSPEFGAKSQQTSSRILYDIP---CKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHER 110
BLAST of GI11566 vs. SwissProt
Match: gi|1706557|sp|P50239.1|E75_GALME (RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 95.9005 bits (237), Expect = 1.834e-19 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0 Query: 37 LCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 LCRVC + A+GFH+G +CEGCK FF R+ + + C N +C I + NR C+ CRL+KC+ VGMS+ R+GR Sbjct: 46 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGR 122
BLAST of GI11566 vs. SwissProt
Match: gi|75068622|sp|Q4U3Q4.1|PPARG_CANFA (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.043e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. SwissProt
Match: gi|6015045|sp|O77245.1|E75_METEN (RecName: Full=Nuclear hormone receptor E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 94.7449 bits (234), Expect = 3.063e-19 Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0 Query: 37 LCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPS 133 LCRVC + A+GFH+G +CEGCK FF R+ + + C N +C I + NR C+ CRL+KC+ VGMS+ R+GR K L Q N S Sbjct: 31 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAMQSVNAKS 127
BLAST of GI11566 vs. SwissProt
Match: gi|13431782|sp|O62807.1|PPARG_PIG (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.111e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 138 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 211
BLAST of GI11566 vs. SwissProt
Match: gi|13431788|sp|O18924.1|PPARG_MACMU (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.126e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. SwissProt
Match: gi|13432234|sp|P37231.3|PPARG_HUMAN (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.155e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. SwissProt
Match: gi|13431783|sp|O88275.2|PPARG_RAT (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.240e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. SwissProt
Match: gi|13431789|sp|O18971.1|PPARG_BOVIN (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.299e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. SwissProt
Match: gi|13431791|sp|P57797.1|PPARG_CRIGR (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 93.9745 bits (232), Expect = 3.305e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 109 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 182
BLAST of GI11566 vs. SwissProt
Match: gi|13432235|sp|P37238.3|PPARG_MOUSE (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 94.3597 bits (233), Expect = 3.513e-19 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 38 CRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGR 113 CRVC + A+GFH+G CEGCK FF RT + + C N C I+KK+R C+ CR +KCL VGMS + R+GR Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGR 212
BLAST of GI11566 vs. nr
Match: gi|657600398|gb|AID52860.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0 Identity = 322/432 (74.54%), Postives = 355/432 (82.18%), Query Frame = 0 Query: 18 FGSPFDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSISGPGSLPSLPPILPASMSSPLSMPSPTLTTSPSGLWRPQESSPSPRSAISEPARSFE-----LPKLRRPTPSPPSSAERDLGAFLRLKSAAREAQR---RPSSPRDDPPEV--NPNLGSLASRFHPMYSPFAGSLPLLPPTFNFPTFANLPIHKQALLSPLLASSQMLAAAAAARKAYPFFSPSAVSEMNAARRPDDILAEHRALLERFKTVSAEMVAASEQRSSSNGSSTPGKDTATSANIMDLSKRSSEEESNSSSSPPSVGSEIIPHLSDTEDEDEE----PLRKTESNNN---ERKTGRRNEETPLDLTCV 432 FG+PFDQTKIDKLDPMQNQLCRVC+EPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQ GP+ S GS SLPPILPASM +P+SM SPTLTTSPSGLWRPQE SPSPRSAISEP R FE + P SAERDL FLRLKS+A R RP+SP D+ PEV + LGSLASRFHPMYSPF +LPLLPPTFNFPTFANLP+HKQALLSPLLASSQMLAAAAAARKAYP + + +E+NA+R P+DILAEHRALLERF++VSAEMVAASE+R N ++P K+ + NIMDLSKRSS+EESN SSSPPSVGSEIIPHLSDT++E+E+ K ESNNN ERK ++ +ETPLDLTCV Sbjct: 21 FGNPFDQTKIDKLDPMQNQLCRVCNEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQANGGPAGSHAGSSGSLPPILPASMHTPMSMTSPTLTTSPSGLWRPQEPSPSPRSAISEPPRLFEAGISRSSRASPSPPPTSVSAERDLSKFLRLKSSAAGGIREPVRPASPIDEKPEVSISHTLGSLASRFHPMYSPFGATLPLLPPTFNFPTFANLPLHKQALLSPLLASSQMLAAAAAARKAYPLLA-TPPAEVNASRAPEDILAEHRALLERFRSVSAEMVAASERR--DNVKTSP-KNPLLAQNIMDLSKRSSDEESNGSSSPPSVGSEIIPHLSDTDEENEDSEVGARSKAESNNNEKAERKAVKKGDETPLDLTCV 448
BLAST of GI11566 vs. nr
Match: gi|657600394|gb|AID52858.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 245.743 bits (626), Expect = 9.483e-72 Identity = 152/321 (47.35%), Postives = 184/321 (57.32%), Query Frame = 0 Query: 22 FDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSISGPGSLPSLPPILPASMSSPLSMPSPTLTTSPSGLWRPQESSPSPRSAISEPARSFELPKLRRPTPSPPSSAERDLGAFLRLKSAAREAQRRPSSPRDDPPEVNPNLG-------SLASRF-HPMYSPFAGSLPLLPPTFNFPTFANLPIHKQALLSPLLASSQMLAAAAAARKAYPFFSPSAVSEMNAARRPD-DILAEHRALLERF 333 D +++D+LDPMQNQLCRVC EPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRC ++KKNRT CKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLMQQ N SG + S + S +P+ +W SSP P P LR P P P ++ A + + A P ++ P ++P G SL S PM S + G L + P F +P+HKQALLSPLLA + + A + P FS RP+ D+ AEH+AL+ER+ Sbjct: 28 IDHSRLDRLDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLMQQNLQNPAGASGKPM---------SPPMSSSASASSLSPNTPASMW----SSPPKTEKPQSPDLREISPPLRSPEP-PLKMSQCKTSAPSPMPMSPHPASLSPF--KNLIPNLHPMGGPMLKPETSLPSPIPQPMTSLYGGFPSPLSLMSSVPGFPGIPMHKQALLSPLLAQTHLWQMA----RTNPLFS---------GLRPEVDLFAEHKALVERY 319
BLAST of GI11566 vs. nr
Match: gi|1325276629|ref|XP_023322962.1| (nuclear receptor ROR-alpha-like [Eurytemora affinis]) HSP 1 Score: 223.787 bits (569), Expect = 6.014e-64 Identity = 150/320 (46.88%), Postives = 182/320 (56.88%), Query Frame = 0 Query: 26 KIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSISGPGSLPSLPPILPASMSSPLSMPSPTLTTSPSGLWRPQESSP--SP-RSAISEPARSFELPKLRRPTPSPPSSAERDLGAFLRLKSAAREAQRRPSSPRDDPPEVNPNLGSLASRFHPMYSPFAGSLPLL---PPTFNFPTFANLPIHKQALLSPLLASSQMLAAAAAARKAYPFFSPSAVSEMNAARRPDDILAEHRALLERFKTVSAE 339 K+D++DP+QNQLCRVC EPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKN+YRC ++KKNRT CKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLMQQ G SIS P P P + + S+P PT++ W P SSP SP ++ IS P+RS PSP + + S+ + SPR D P P+ P SLP L PP F + P ++ LSPLLA + LA + A P E + D+L EH+ LLE + + + Sbjct: 35 KVDQIDPLQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNSYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLMQQNMGKSGSISHPPPPPPPRLPSPPNHIAERSLP-PTIS------W-PPTSSPLLSPIKTEISRPSRS----------PSPLHISLNSDKSSPSPISSLSPRKISDISPRSDYP-------------FPLI-PTPTSLPALYGFPPPLPFLSSHPFPFYR---LSPLLAGNPFLANSLLFSMAGQKSPPEIQKEKEQSHL--DLLKEHQTLLETYAALKKQ 317
BLAST of GI11566 vs. nr
Match: gi|1325276682|ref|XP_023322990.1| (nuclear receptor subfamily 1 group D member 1-like [Eurytemora affinis]) HSP 1 Score: 213.001 bits (541), Expect = 4.118e-61 Identity = 102/152 (67.11%), Postives = 118/152 (77.63%), Query Frame = 0 Query: 19 GSPFDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSISGPGSLPSLPPILPASMSSPLSMPS-PTLTTSPSGL 169 S FDQ K++ +DP++NQLCRVC EPAAGFHFGAFTCEGCKSFFGR+CNNQ+VIQECKN+YRC +++KNRT CKACRLRKCLLVGMSKSG RYGRRSNWFKIHCLMQ+ +++ S P PIL S P PS P + SPS L Sbjct: 13 NSIFDQEKLNSIDPLENQLCRVCEEPAAGFHFGAFTCEGCKSFFGRSCNNQTVIQECKNSYRCVVDRKNRTACKACRLRKCLLVGMSKSGCRYGRRSNWFKIHCLMQK------NVTKISSAPY--PILSTRFSDPTLNPSRPNQSRSPSPL 156
BLAST of GI11566 vs. nr
Match: gi|1325276684|ref|XP_023322991.1| (protein embryonic gonad-like [Eurytemora affinis]) HSP 1 Score: 211.075 bits (536), Expect = 2.631e-59 Identity = 89/103 (86.41%), Postives = 97/103 (94.17%), Query Frame = 0 Query: 22 FDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLM 124 D K++K+DP+QNQLCRVC EPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKN+YRC ++KKNRT CKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLM Sbjct: 14 MDMNKVEKVDPLQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNSYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLM 116
BLAST of GI11566 vs. nr
Match: gi|657600396|gb|AID52859.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 203.371 bits (516), Expect = 3.745e-57 Identity = 85/99 (85.86%), Postives = 95/99 (95.96%), Query Frame = 0 Query: 28 DKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 126 DK DP+QNQLCRVC EPAAG+HFGAFTCEGCKSFFGRTCNNQS++Q+CKN+++C ++KKNRT CKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ Sbjct: 40 DKSDPLQNQLCRVCHEPAAGYHFGAFTCEGCKSFFGRTCNNQSIVQDCKNSFKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 138
BLAST of GI11566 vs. nr
Match: gi|1325276690|ref|XP_023322994.1| (zygotic gap protein knirps-like [Eurytemora affinis]) HSP 1 Score: 192.2 bits (487), Expect = 3.273e-53 Identity = 91/147 (61.90%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 19 GSP-FDQTKIDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSISGPGSLPSLPPILPASMSSPLSMPSPTLTT 164 GSP F + +DPM+NQLCRVC E AAGFHFGAFTCEGCKSFFGR CNNQ+ I +CKN+++C I+K+NRT+CKACRLRKCL VGMSKSG RYGRRSNWFKIHCLMQ+ S+ S+ S P LP ++ P ++ +L T Sbjct: 10 GSPMFSTEQFSTMDPMENQLCRVCEEKAAGFHFGAFTCEGCKSFFGRFCNNQTNIPDCKNSFKCVIDKRNRTSCKACRLRKCLSVGMSKSGCRYGRRSNWFKIHCLMQKNAEK--SVKQEPSVHSAPSSLPTLINRPTNLSYSSLFT 154
BLAST of GI11566 vs. nr
Match: gi|1279718333|ref|XP_022903645.1| (zygotic gap protein knirps-like [Onthophagus taurus]) HSP 1 Score: 191.43 bits (485), Expect = 1.527e-52 Identity = 87/115 (75.65%), Postives = 96/115 (83.48%), Query Frame = 0 Query: 35 NQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPS-ISGPGSLPSLPPILP 148 NQLC+VC EPAAGFHFGAFTCEGCKSFFGRT NN+S I ECKNN +C INKKNRT CKACRLRKC+LVGMSKSGSRYGRRSNWFKIHCL+Q+QQ G + I+ +L P LP Sbjct: 2 NQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNRSSISECKNNDKCVINKKNRTACKACRLRKCILVGMSKSGSRYGRRSNWFKIHCLLQEQQQQGATNIAAAANLLRPHPYLP 116
BLAST of GI11566 vs. nr
Match: gi|939256784|ref|XP_014248190.1| (nuclear receptor subfamily 1 group D member 1-like [Cimex lectularius]) HSP 1 Score: 186.422 bits (472), Expect = 5.964e-52 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0 Query: 33 MQNQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNG 131 + NQLCRVC EPAAGFHFGAFTCEGCKSFFGRT NN S I ECKNN C INKKNRT+CKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCL+Q+Q G+G Sbjct: 5 IMNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTSCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQGGSG 103
BLAST of GI11566 vs. nr
Match: gi|195128873|ref|XP_002008884.1| (uncharacterized protein Dmoj_GI11566 [Drosophila mojavensis] >gi|193920493|gb|EDW19360.1| uncharacterized protein Dmoj_GI11566 [Drosophila mojavensis]) HSP 1 Score: 191.045 bits (484), Expect = 1.207e-51 Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0 Query: 35 NQLCRVCSEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQQGNGPSI 134 NQLC+VC EPAAGFHFGAFTCEGCKSFFGRT NN + I CK+N C INKKNRT CKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCL+Q+QQG+G ++ Sbjct: 2 NQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQGSGATM 101 The following BLAST results are available for this feature:
BLAST of GI11566 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of GI11566 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of GI11566 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold80_size398941:226072..303230- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold80_size398941-processed-gene-2.10 ID=snap_masked-scaffold80_size398941-processed-gene-2.10|Name=GI11566|organism=Tigriopus kingsejongensis|type=gene|length=77159bp|location=Sequence derived from alignment at scaffold80_size398941:226072..303230- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GI11566' has the following synonyms
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