e3 ubiquitin-protein ligase rnf8-b-like, snap_masked-scaffold899_size83673-processed-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Namee3 ubiquitin-protein ligase rnf8-b-like
Unique Namesnap_masked-scaffold899_size83673-processed-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000002262 (supercontig:LSalAtl2s:LSalAtl2s142:1422944:1424702:-1 gene:EMLSAG00000002262 transcript:EMLSAT00000002262 description:"maker-LSalAtl2s142-snap-gene-13.28")

HSP 1 Score: 96.2857 bits (238), Expect = 8.101e-23
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:   36 QELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKC-DASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDR 116
            +E  CTIC E+FI+P T  CGHVFC++CI +WK KC +  L CPNCR  V     + N Y+ENLI + ++ +G D++ ER++
Sbjct:  355 EEFKCTICEEIFIKPVTTNCGHVFCEYCITKWKHKCKENQLTCPNCRLSVT--SYSKNHYIENLIESLVRKFGDDIQKEREK 434
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000009314 (supercontig:LSalAtl2s:LSalAtl2s595:428650:432260:1 gene:EMLSAG00000009314 transcript:EMLSAT00000009314 description:"maker-LSalAtl2s595-augustus-gene-4.28")

HSP 1 Score: 60.077 bits (144), Expect = 1.207e-10
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRV-GRDKITPNIYVENLIHNFIQGYGP--------DLKAERDRRLAERQAQVEATDQ 130
            F++ F   L C+IC E+F+    + CGH FC+ CI +W  K +    CP CR  + G+     N+ ++  I   ++ + P        DL  ER  +   R + + ++++
Sbjct:  158 FKELFETNLQCSICSEIFLFATVITCGHTFCEDCIEEWTSKKN---NCPICRANIKGK---ASNVVLDEHIEKMVEQFFPETEKKSRKDLVLERKTKKMNRVSNINSSNK 261
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000007447 (supercontig:LSalAtl2s:LSalAtl2s426:331796:339618:1 gene:EMLSAG00000007447 transcript:EMLSAT00000007447 description:"maker-LSalAtl2s426-augustus-gene-3.11")

HSP 1 Score: 53.1434 bits (126), Expect = 3.855e-8
Identity = 25/78 (32.05%), Postives = 44/78 (56.41%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRD-KITPNIYVENLIHNFIQGY 106
            F +Q  +ELSC  C ++ + P T PC H  C  CI++  +  +   +CP+CR+ +GR+  I  N  ++ ++ +   GY
Sbjct:  629 FYNQVEEELSCICCKDIVLDPVTTPCQHNMCKKCILRVFK--EELYSCPSCRKELGRNYSIKVNKSLQTILRSMFDGY 704
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82209734|sp|Q7ZX20.1|RNF8A_XENLA (RecName: Full=E3 ubiquitin-protein ligase rnf8-A; AltName: Full=RING finger protein 8-A; AltName: Full=RING-type E3 ubiquitin transferase rnf8-A)

HSP 1 Score: 71.633 bits (174), Expect = 6.891e-13
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEA 127
              D    EL C IC E FI   TL C H FC +CI  WK++ +    CP CRQ +  +  T ++ ++N I + +    P++K  R   + ER+  V+A
Sbjct:  372 MNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWKKRKE---ECPICRQEIVTE--TRSLVLDNCIDSMVDKLSPEMKNRRAALILERKEMVQA 464
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82202083|sp|Q6NRG0.1|RNF8B_XENLA (RecName: Full=E3 ubiquitin-protein ligase rnf8-B; AltName: Full=RING finger protein 8-B; AltName: Full=RING-type E3 ubiquitin transferase rnf8-B)

HSP 1 Score: 70.0922 bits (170), Expect = 2.692e-12
Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEA 127
              D    EL C IC E FI   TL C H FC +CI  W+++ +    CP CRQ +  +  T ++ ++N I + +    P++K  R   + ER+  V+A
Sbjct:  367 MNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKE---ECPICRQEILSE--TRSLVLDNCIDSMVDKLSPEMKNRRAALILERKEMVQA 459
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|123782072|sp|Q4KLN8.1|RNF8_RAT (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 67.781 bits (164), Expect = 1.154e-11
Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC FCI +W KRK +    CP CR+ +  +  T ++ ++N I   ++    D+K  R   + ER+A+
Sbjct:  395 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKVE----CPICRKDI--ESRTNSLVLDNCISKMVERLSSDVKERRSVLIRERRAK 484
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|21362895|sp|Q8VC56.1|RNF8_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=ActA-interacting protein 37; Short=AIP37; AltName: Full=LaXp180; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 67.3958 bits (163), Expect = 1.597e-11
Identity = 32/95 (33.68%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC FCI +W ++    + CP CR+ +  +  T ++ ++N I   +     D+K  R   + ER+A+
Sbjct:  396 MNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKR---KVECPICRKDI--ESRTNSLVLDNCISKMVDNLSSDVKERRSVLIRERRAK 485
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|21362894|sp|O76064.1|RNF8_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF8; Short=hRNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 65.4698 bits (158), Expect = 7.995e-11
Identity = 30/95 (31.58%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC +CI +W ++    + CP CR+ +     T ++ ++N I+  +     ++K  R   + ER+A+
Sbjct:  393 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKSK--TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKAK 482
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82210116|sp|Q803C1.1|RNF8_DANRE (RecName: Full=E3 ubiquitin-protein ligase rnf8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase rnf8)

HSP 1 Score: 65.0846 bits (157), Expect = 1.094e-10
Identity = 33/110 (30.00%), Postives = 52/110 (47.27%), Query Frame = 0 
Query:   10 ELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLA 119
            E++   +E +   +        +    EL C+IC ELFI   TL C H FC  CI +W+ + D    CP C Q +     T ++ ++N I   ++    D+   R+RRL 
Sbjct:  362 EVTKEEKEKAKAQKEEVVTQMTEVLESELQCSICSELFIEAVTLNCAHSFCQHCISEWRNRKD---KCPMCWQNITSQ--TRSLVLDNCIDRMVENLSADM---RERRLV 463
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|75061601|sp|Q5R4I2.1|RNF8_PONAB (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 64.3142 bits (155), Expect = 2.010e-10
Identity = 29/95 (30.53%), Postives = 47/95 (49.47%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC +CI +W ++    + CP CR+ +     T ++ ++N I+  +     ++K  R   + ER+ +
Sbjct:  394 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKSK--TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKVK 483
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 62.3882 bits (150), Expect = 8.918e-10
Identity = 31/96 (32.29%), Postives = 47/96 (48.96%), Query Frame = 0 
Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E F+   TL C H FC +CI +W KRK +    CP CR+ +     T ++ ++N I   +     ++K  R   + ER+ +
Sbjct:  395 MNDVLENELQCIICSEYFVEAVTLNCAHSFCSYCINEWMKRKVE----CPICRKDIKSK--TRSLVLDNCISKMVDNLNSEVKERRIVLIRERKGK 484
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|353558884|sp|A4IF63.1|TRIM2_BOVIN (RecName: Full=Tripartite motif-containing protein 2; AltName: Full=E3 ubiquitin-protein ligase TRIM2; AltName: Full=RING-type E3 ubiquitin transferase TRIM2)

HSP 1 Score: 58.151 bits (139), Expect = 2.826e-8
Identity = 30/86 (34.88%), Postives = 42/86 (48.84%), Query Frame = 0 
Query:   19 SSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRV-----GRDKITPNIYVENLI 99
            +S A   PS   R    Q L C+IC E +  PK LPC H FC+ C+  +      +L+CP CRQ       G   +  N ++ NL+
Sbjct:    2 ASEATNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLM 87
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|52783145|sp|Q92021.1|NF7B_XENLA (RecName: Full=Nuclear factor 7, brain; Short=xNF7; Short=xNF7-B)

HSP 1 Score: 57.7658 bits (138), Expect = 3.081e-8
Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 0 
Query:    9 RELSSPAREPSSPARAGPSDAFRD--------QFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQ-WKRKCDASLACPNCRQRVGRDKITPNIYVENL 98
            R++  P  EP   A+    DA ++         F++EL+C +C ELF  P  + CGH FC  CI + W+ +  +S ACP CR+ +   K T N  + NL
Sbjct:  107 RKIEEPEPEPKK-AKVEEKDASKNASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQ--SSFACPECRESITDRKYTINRVLANL 202
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1200721572|ref|XP_021203237.1| (E3 ubiquitin-protein ligase rnf8-A isoform X4 [Bombyx mori])

HSP 1 Score: 76.2554 bits (186), Expect = 7.897e-12
Identity = 60/229 (26.20%), Postives = 93/229 (40.61%), Query Frame = 0 
Query:   19 SSPARAGPSDAFRDQFSQ----ELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQ-AQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESNDEATSHPEDEHEDEADTDSS-------MEGEEGAPYGGYGRCYSC 235
            S P R G S    ++  +    EL C+IC ELF++  TL C H FC +CI  WK+K      CP CR  +  +    ++ ++  I   +Q    + K +R   L  RQ  + EA    ++E +  R  +   P   +   S        +  N       +SG         +  + + S+   +  T+        E   DS        + G  G+ YGGYGRCY C
Sbjct:  468 SEPIREGSSTQTFNEVGEVMESELQCSICAELFVKATTLNCSHTFCLYCISMWKKK---KKDCPICRTSISTE--CKSLVLDTFIERMVQKLPEETKLKRKELLKSRQELESEADRSNISETDDRRNVSLTAPKRQTPKSSRRRRRRNTMITNPTMIIPEESGSNRPIPTIDLTMISTSSTMLPNSVTATATSPSRVETGNDSDGVRRLGVVAGRPGSYYGGYGRCYKC 691
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|817063814|ref|XP_012253625.1| (E3 ubiquitin-protein ligase rnf8-like isoform X2 [Athalia rosae])

HSP 1 Score: 75.8702 bits (185), Expect = 8.411e-12
Identity = 77/303 (25.41%), Postives = 113/303 (37.29%), Query Frame = 0 
Query:    3 EPCSPARELSSPAREPSSPARAGPSDAFR---DQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAER-----DRRLAER---QAQVEATDQLLAEKESLRQANRGRP-----GAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQ--------------------------------VDSDSS-ESNDEATSHPE--DEHED------EADTDSSMEGEEGAPYGGYGRCYSC----DAVPGRPSR 244
            E      E  S  +   +P+    ++ F    D   ++L+C+IC ELF+   TL C H FC +CI  WK K      CP CR  +    +  ++ ++N I   ++    D K  R     +RR  ER   QA    T +    +  +  AN          AP+    ++       Q   +   GG +G  ++++N                                      D D+S  S   +T H    DE ED      E   D S++G  GA YGGYG CY C       PG P R
Sbjct:  358 ETIDLTVETPSDKKVAETPSTGSVNEVFNKVGDIMDEQLTCSICSELFVTATTLECTHTFCQYCINTWKEK---KAECPVCRASIT--AMHRSLVLDNFIDKMVENLSADYKKRRTDIVEERRENERLAKQATASGTGRRGRPRGRIANANVNATINLTGNAPAAATRSVEGTSNNQQ---SSASGGSTGDSTSQTNESDSSASSASTDHDGDTASLDSSSSNSQTSEDPEDNFTDMDTSINSEGHSTDHNWGVDEGEDDFSWWSELSDDDSVDGHPGALYGGYGACYVCGRRGHWAPGCPFR 652
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1080052671|ref|XP_018567894.1| (E3 ubiquitin-protein ligase CHFR-like isoform X3 [Anoplophora glabripennis])

HSP 1 Score: 75.8702 bits (185), Expect = 9.088e-12
Identity = 43/120 (35.83%), Postives = 58/120 (48.33%), Query Frame = 0 
Query:   22 ARAGPSDAFRDQ----------FSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQ 130
            A+ GPS    D+             EL C IC ELF++  TL C H FC +CI  W K K D    CP CR ++    +T  I ++N+I   I+    ++K  R   L ER+ Q EA  Q
Sbjct:  304 AQPGPSTIKTDKPPEQTDNYEVMENELQCVICSELFVKALTLNCSHTFCKYCIRMWNKNKSD----CPICRTKI--TSMTSTIVLDNVIEKVIETSNEEIKQHRRSVLEERRKQEEAESQ 417
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1080052669|ref|XP_018567893.1| (E3 ubiquitin-protein ligase CHFR-like isoform X2 [Anoplophora glabripennis])

HSP 1 Score: 75.8702 bits (185), Expect = 9.326e-12
Identity = 43/120 (35.83%), Postives = 58/120 (48.33%), Query Frame = 0 
Query:   22 ARAGPSDAFRDQ----------FSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQ 130
            A+ GPS    D+             EL C IC ELF++  TL C H FC +CI  W K K D    CP CR ++    +T  I ++N+I   I+    ++K  R   L ER+ Q EA  Q
Sbjct:  304 AQPGPSTIKTDKPPEQTDNYEVMENELQCVICSELFVKALTLNCSHTFCKYCIRMWNKNKSD----CPICRTKIT--SMTSTIVLDNVIEKVIETSNEEIKQHRRSVLEERRKQEEAESQ 417
[Close]
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1158894471|ref|XP_020351861.1| (E3 ubiquitin-protein ligase RNF8 isoform X2 [Oncorhynchus kisutch])

HSP 1 Score: 75.485 bits (184), Expect = 1.147e-11
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0 
Query:   10 ELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
            E++   +E +   +        +    EL C IC ELFIR  TL C H FC  CI +W+++ D    CP CRQ +     T ++ ++N I   ++   PD+K  R   + ER+AQ
Sbjct:  320 EVTKEEKERARTQKEEVVTQMTEVLENELQCIICSELFIRAVTLNCAHSFCLHCISEWRKRKD---ECPICRQAILSQ--TRSLVLDNCIDRMVEQLSPDMKQRRLVLITERKAQ 429
The following BLAST results are available for this feature:
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000022628.101e-2347.56supercontig:LSalAtl2s:LSalAtl2s142:1422944:1424702... [more]
EMLSAG000000093141.207e-1027.27supercontig:LSalAtl2s:LSalAtl2s595:428650:432260:1... [more]
EMLSAG000000074473.855e-832.05supercontig:LSalAtl2s:LSalAtl2s426:331796:339618:1... [more]
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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|82209734|sp|Q7ZX20.1|RNF8A_XENLA6.891e-1334.69RecName: Full=E3 ubiquitin-protein ligase rnf8-A; ... [more]
gi|82202083|sp|Q6NRG0.1|RNF8B_XENLA2.692e-1233.67RecName: Full=E3 ubiquitin-protein ligase rnf8-B; ... [more]
gi|123782072|sp|Q4KLN8.1|RNF8_RAT1.154e-1136.46RecName: Full=E3 ubiquitin-protein ligase RNF8; Al... [more]
gi|21362895|sp|Q8VC56.1|RNF8_MOUSE1.597e-1133.68RecName: Full=E3 ubiquitin-protein ligase RNF8; Al... [more]
gi|21362894|sp|O76064.1|RNF8_HUMAN7.995e-1131.58RecName: Full=E3 ubiquitin-protein ligase RNF8; Sh... [more]
gi|82210116|sp|Q803C1.1|RNF8_DANRE1.094e-1030.00RecName: Full=E3 ubiquitin-protein ligase rnf8; Al... [more]
gi|75061601|sp|Q5R4I2.1|RNF8_PONAB2.010e-1030.53RecName: Full=E3 ubiquitin-protein ligase RNF8; Al... [more]
gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN8.918e-1032.29RecName: Full=E3 ubiquitin-protein ligase RNF8; Al... [more]
gi|353558884|sp|A4IF63.1|TRIM2_BOVIN2.826e-834.88RecName: Full=Tripartite motif-containing protein ... [more]
gi|52783145|sp|Q92021.1|NF7B_XENLA3.081e-835.35RecName: Full=Nuclear factor 7, brain; Short=xNF7;... [more]

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1200721572|ref|XP_021203237.1|7.897e-1226.20E3 ubiquitin-protein ligase rnf8-A isoform X4 [Bom... [more]
gi|817063814|ref|XP_012253625.1|8.411e-1225.41E3 ubiquitin-protein ligase rnf8-like isoform X2 [... [more]
gi|1080052671|ref|XP_018567894.1|9.088e-1235.83E3 ubiquitin-protein ligase CHFR-like isoform X3 [... [more]
gi|1080052669|ref|XP_018567893.1|9.326e-1235.83E3 ubiquitin-protein ligase CHFR-like isoform X2 [... [more]
gi|1158894471|ref|XP_020351861.1|1.147e-1133.04E3 ubiquitin-protein ligase RNF8 isoform X2 [Oncor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold899_size83673supercontigscaffold899_size83673:79021..82054 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold899_size83673:79021..82054+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold899_size83673-processed-gene-0.9 ID=snap_masked-scaffold899_size83673-processed-gene-0.9|Name=e3 ubiquitin-protein ligase rnf8-b-like|organism=Tigriopus kingsejongensis|type=gene|length=3034bp|location=Sequence derived from alignment at scaffold899_size83673:79021..82054+ (Tigriopus kingsejongensis)
GCCCGTGAGCCCTGTTCGCCGGCCCGTGAGCTCAGTTCGCCGGCCCGTGA
GCCCAGTTCGCCGGCCCGTGCGGGTCCGTCGGACGCCTTTCGGGACCAGT
TTAGCCAAGAGCTGAGCTGCACCATTTGCCACGAGTTATTCATCCGGGTA
AGCGCGAGTCCAGCCAGGCTAAAGCTAGCCTTGCGGGGAGCTGAGGAGGT
TACTCCGGGTTTGGGTCTGAATTGGGGTCCTTCAAGCCTCGAGGAACCAG
TCGACGTCCGGAGCCCCGCCTAATAGGCGCCGAAATCAGGCCCAGTCACC
ACTGGTTTTTCCCGGCGTCAACGCGCAATGAGGCTGACAACAGCCAAGCT
GTATGTGTAATAGTTTACTCCTACATATAGTATACATATCGCTCTAACGA
CTTCGAGATTTCACTCCAGGTCGATTATCGATATTTGACTTCGCATCGAA
TATCGAGTGTCTTTGACTTCACATCGACTATCGAGTTCCATGAGCGATAT
GATATTCCCTCGAAAAAATTGCGCACATTGCTTTTCTGTCCGGGTACGAG
ACTTGGCTGCTCTCTTGTCACAACTGACCCCGGAAATCTCAGCCATTACT
CATCACATACCTCAAGCATAGTCTATTCTAGTGAGCCAACGAGATCTGGT
TTAGCCGAAACTTCGGTTCGAATCCGAATAGAACAACAGCATTATTTTCC
CCCAAAGTAATGAGCATACAGCTTCGAAGAAGATTTTAATCATTCAAGGT
GTTTGGCCATTATTTCCGACATTACTATGTAGGTTACTGAACTGTTGGAT
TTGTCACTATTCCAAACAGTAATGGAGGCCTTGAACTCCACCACCTAGGC
TCTCGTTGTGCGGCGTGAATTTAATACCGGAACAAATTAATAACACTATC
TCTCACTCCTTGAGTCCGTTTTGCGCACTTAATTGGATTAAATGAGCCGG
GAAAATGCAACATTTCAATCCCTGGGGAAAAAAACTTCAATCCTGGGAAT
GGGCATGGCGAAAAAAAATAGCATTTTCCCGAAAAATCAGAATGACAATT
CCAATCTGAGCAACTCTAATTGGCTACTTTTCTCTATCTCATTATGTGTC
AAATACGATCGATGCATCGGATATCGAACTAACCTAACCTCAGTAATCTA
AATTGGAAGTCCTGTTTCGGTGATCGAATCCGATAATTGAATATGACACA
TCCCTAGTCTTGGTCCTGGCGTGCCCAATCACCATCCAATGGGATCCGCC
GACCCCGTGCTCTTTAGTCATCGATGGTTTTTTTGTTTTGTTTCGTTTGG
AAGGCCCCGGGCATTTCTGCACAGCTAGGAAAATCTCTACGGAGACATGG
TCAGCCTGGCGGTCAAATTTATCATGAATTATTACCTTACCCTCGAGGAA
TGACCACAGGTACGCCCACTTTAATCCCGCAAGGGCAGCCAGCAATAGCT
GTGAGTGAACACCACTAGTGGCCGGAACTTGGCAAGCCCGGGGATCGAAC
CCACGACCCTCGGATAGCGCAATGATAGATGACTGATTGTGCCACTCTAC
CATTGCGCTACGCTGCTTGCCTTCGGGTATGCCCAGATCACTTTTCGCGG
TCGGCTAGGTCCAGTCTGCCAGCGAAACCCGTGGTCTCTCCCCTCAGTCC
CTACCCGTGGTCTCTTCCCTCAGTCCCTGCCCGTGACAGCGGCTCGGTGT
CCGACTCGAGGAGCTCGCTCAGTGTGTTGAAAGCTCACGTTGCCTTTCAG
CCCAAAACCCTACCGTGTGGTCACGTCTTTTGCGATTTTTGCATCATGCA
ATGGAAGCGGAAATGCGATGCTTCGCTGGCCTGCCCCAATTGCCGACAAC
GCGTGGGACGGGACAAAATCACGCCCAATATTTATGTGGAGAACCTCATC
CACAACTTCATCCAAGGCTACGGACCCGATCTGAAGGCGGAGCGCGACCG
CCGATTGGCCGAGCGGCAGGCTCAAGTGGAAGCCACGGACCAGTTGCTAG
CCGAGAAAGAGTCACTCCGACAGGCTAATCGGGGCCGACCCGGAGCGCCC
AGTGGTGGACTGAGTACCATTCACGCCATGTTTCAGCGGGTCCAACATAA
CCTCAATCGGACGGAAGGAGGCCAATCCGGGGGCGTGAGTACGCGATCCA
ACACCAGGTACGCCATGACCGCTTCAAAAAATTGACCGGTCAATGTTATC
AATATAAACACAAATATTGTGTTTGCCATTTGACAAAATTATCTGGTCAG
ACACTCGTTCTTGAATCTGTGAGTCAGGTCGATTCGGACTTCCAAAACGA
TTTGAAAATGTTACAATGATGCGCTAAAATGGGAACACTAACCACTGGAT
GCCTAGTGAATGTTATGCTTATTTCCCGACTAGGGTCATTCAGGTCGATT
CCGACTCTTCCGAGAGCAATGACGAGGCAACATCTCATCCAGAAGACGAG
CATGAAGACGAAGCTGATACCGATTCGTCCATGGAGGGCGAGGAAGGTGC
CCCGTATGGCGGTTACGGAAGATGCTACAGTTGTGGTACGTGTAAACTTA
ACATGAGCCCGTCTGTAACCCTACTTTTTCATTTTTCACCACCGCCATCA
GTAGAAATGGCGAGCATGCTGCAGATATGCGTGTGTAATGTAGTAAAAAG
TGTGGTCATAAAGTGATGTAATAAAATGCCGTCCTTCACAGGGTAGCTAG
CCTGTTTCCGGTCAAGGAAATATCACTTCTTTGGTCAGAACAGCCGAGCA
AATTAAAATATTTTTTTGAAAGGAAAATTGGATTATTTCAAGTGGCCAAG
NGCTTCCTGAATCGAGATTTCCCCGTGGTTGATCTTGGCCACCTCGGAGC
TGGATAAACTCATTTCCAGGTCCTCTAGGAGACAGACGCCGTCCCCGGAC
GGCCCTCCCGTGATTTGGTTGAAGGCCACCTCGCCCGCCCGCACGTAGTC
GACAAAGATGGCGGTGAGGGCGGCGGCCTCGGAAAATCCCAGCCTCTCGC
CATAGAGGACGAGACGGCGGAAGAAAAGCGCTGA
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Synonyms
The feature 'e3 ubiquitin-protein ligase rnf8-b-like' has the following synonyms
Synonym
Tk06724
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