barrier-to-autointegration factor, snap_masked-scaffold934_size79169-processed-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of barrier-to-autointegration factor vs. L. salmonis genes
Match: EMLSAG00000008801 (supercontig:LSalAtl2s:LSalAtl2s548:207507:209059:-1 gene:EMLSAG00000008801 transcript:EMLSAT00000008801 description:"snap-LSalAtl2s548-processed-gene-1.52") HSP 1 Score: 84.3445 bits (207), Expect = 2.307e-23 Identity = 37/75 (49.33%), Postives = 56/75 (74.67%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQS 75 MS+T+QKHR FV EPM +K VT+L GIG + G +L +G+D+AYV+LGQFL+ +K+ + F++WL G+ + +S Sbjct: 1 MSSTTQKHRLFVCEPMRNKLVTELPGIGLVYGSKLIDRGYDRAYVLLGQFLVFQKDEERFINWLSFNFGSTNCKS 75
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|82202300|sp|Q6P026.1|BAF_DANRE (RecName: Full=Barrier-to-autointegration factor) HSP 1 Score: 144.05 bits (362), Expect = 1.351e-45 Identity = 64/90 (71.11%), Postives = 77/90 (85.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKH++FVAEPM +K+V LAGIGE+LGKRLE KGFDKAYVVLGQFL+L+K+ +LF +WLKD GAN+KQ DCY CL +WCD FL Sbjct: 1 MSSTSQKHKDFVAEPMGEKSVMALAGIGEVLGKRLEEKGFDKAYVVLGQFLVLRKDEELFREWLKDTCGANTKQQGDCYSCLREWCDSFL 90
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|82185414|sp|Q6NTS2.1|BAFA_XENLA (RecName: Full=Barrier-to-autointegration factor A) HSP 1 Score: 141.354 bits (355), Expect = 1.632e-44 Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKHR+FVAEPM +K+V LAGIGE LG RLE KGFDKAYVVLGQFL+LKK+ +LF +WLKD+ AN+KQS DCY CL +WCD FL Sbjct: 1 MSSTSQKHRDFVAEPMGEKSVQCLAGIGEALGHRLEEKGFDKAYVVLGQFLVLKKDEELFKEWLKDICSANAKQSRDCYGCLKEWCDAFL 90
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|5921173|sp|O75531.1|BAF_HUMAN (RecName: Full=Barrier-to-autointegration factor; AltName: Full=Breakpoint cluster region protein 1; Contains: RecName: Full=Barrier-to-autointegration factor, N-terminally processed >gi|47115537|sp|P61283.1|BAF_BOVIN RecName: Full=Barrier-to-autointegration factor; Contains: RecName: Full=Barrier-to-autointegration factor, N-terminally processed >gi|71152308|sp|Q5RBU9.1|BAF_PONAB RecName: Full=Barrier-to-autointegration factor; Contains: RecName: Full=Barrier-to-autointegration factor, N-terminally processed) HSP 1 Score: 141.354 bits (355), Expect = 1.909e-44 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0 Query: 3 TTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 TTSQKHR+FVAEPM +K V LAGIGE+LGK+LE +GFDKAYVVLGQFL+LKK+ DLF +WLKD GAN+KQS DC+ CL +WCD FL Sbjct: 2 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGKKLEERGFDKAYVVLGQFLVLKKDEDLFREWLKDTCGANAKQSRDCFGCLREWCDAFL 89
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|82181598|sp|Q66KV4.1|BAFB_XENLA (RecName: Full=Barrier-to-autointegration factor B) HSP 1 Score: 139.813 bits (351), Expect = 8.463e-44 Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKHR+FVAEPM +K+V LAGIG+ LG+RLE KGFDKAYVVLGQFL+LKK+ +LF +WLKD AN+KQS DCY CL +WCD FL Sbjct: 1 MSSTSQKHRDFVAEPMGEKSVQCLAGIGDTLGRRLEEKGFDKAYVVLGQFLVLKKDEELFKEWLKDACSANAKQSRDCYGCLKEWCDAFL 90
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|22095476|sp|Q9R1T1.1|BAF_RAT (RecName: Full=Barrier-to-autointegration factor; AltName: Full=LAP2-binding protein 1; Contains: RecName: Full=Barrier-to-autointegration factor, N-terminally processed) HSP 1 Score: 139.428 bits (350), Expect = 9.900e-44 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0 Query: 3 TTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 TTSQKHR+FVAEPM +K V LAGIG+ LGKRLE +GFDKAYVVLGQFL+LKK+ DLF +WLKD GAN+KQS DC+ CL +WCD FL Sbjct: 2 TTSQKHRDFVAEPMGEKPVGSLAGIGDALGKRLEERGFDKAYVVLGQFLVLKKDEDLFREWLKDTCGANAKQSRDCFGCLREWCDAFL 89
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|22095479|sp|Q9VLU0.1|BAF_DROME (RecName: Full=Barrier-to-autointegration factor) HSP 1 Score: 139.043 bits (349), Expect = 1.327e-43 Identity = 62/90 (68.89%), Postives = 77/90 (85.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS TSQKHRNFVAEPM +K+VT+LAGIGE LG RL+ GFD AY VLGQ+L+LKK+ +LF DW+K++ A+SKQ+SDCY CL+DWC+EFL Sbjct: 1 MSGTSQKHRNFVAEPMGNKSVTELAGIGETLGGRLKDAGFDMAYTVLGQYLVLKKDEELFKDWMKEVCHASSKQASDCYNCLNDWCEEFL 90
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|5915763|sp|O54962.1|BAF_MOUSE (RecName: Full=Barrier-to-autointegration factor; AltName: Full=Breakpoint cluster region protein 1; AltName: Full=LAP2-binding protein 1; Contains: RecName: Full=Barrier-to-autointegration factor, N-terminally processed) HSP 1 Score: 138.658 bits (348), Expect = 2.356e-43 Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 0 Query: 3 TTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 TTSQKHR+FVAEPM +K V LAGIG++L KRLE +GFDKAYVVLGQFL+LKK+ DLF +WLKD GAN+KQS DC+ CL +WCD FL Sbjct: 2 TTSQKHRDFVAEPMGEKPVGSLAGIGDVLSKRLEERGFDKAYVVLGQFLVLKKDEDLFREWLKDTCGANAKQSRDCFGCLREWCDAFL 89
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|82179176|sp|Q5HZM3.1|BAFL_XENLA (RecName: Full=Barrier-to-autointegration factor-like protein; Short=BAF-L; AltName: Full=Barrier-to-autointegration factor 2) HSP 1 Score: 128.642 bits (322), Expect = 2.132e-39 Identity = 61/91 (67.03%), Postives = 73/91 (80.22%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNR-DLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS TSQKHR+FV+EPM DK +T LAGIGE+LG +LE +GFDKAYV+LGQFLIL+K+ DLF DWLKD GANS+Q+ C CL +WC FL Sbjct: 1 MSNTSQKHRDFVSEPMGDKPITALAGIGEVLGGKLEEQGFDKAYVLLGQFLILRKDADDLFKDWLKDSCGANSRQADLCSSCLKEWCSSFL 91
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|22096332|sp|Q03565.3|BAF1_CAEEL (RecName: Full=Barrier-to-autointegration factor 1) HSP 1 Score: 108.612 bits (270), Expect = 1.418e-31 Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 0 Query: 3 TTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 +TS KHR FV EPM DK VT +AGIG G +L GFDKAYV+ GQ+L+LKK+ DLF++WLK+ AG + + + CL++W D+F+ Sbjct: 2 STSVKHREFVGEPMGDKEVTCIAGIGPTYGTKLTDAGFDKAYVLFGQYLLLKKDEDLFIEWLKETAGVTANHAKTAFNCLNEWADQFM 89
BLAST of barrier-to-autointegration factor vs. SwissProt
Match: gi|322518457|sp|A8XAC6.1|BAF1_CAEBR (RecName: Full=Barrier-to-autointegration factor 1) HSP 1 Score: 107.842 bits (268), Expect = 2.798e-31 Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 0 Query: 3 TTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 +TS KHR FV EPM DK VT +AGIG G +L GFDKAYV+ GQ+L+LKK+ DLFV+WLK+ AG + + + CL++W ++F+ Sbjct: 2 STSVKHREFVGEPMGDKEVTCIAGIGPTYGTKLTDAGFDKAYVLFGQYLLLKKDEDLFVEWLKETAGVTANHAKSAFNCLNEWAEQFI 89
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|225713886|gb|ACO12789.1| (Barrier-to-autointegration factor [Lepeophtheirus salmonis]) HSP 1 Score: 169.088 bits (427), Expect = 6.542e-53 Identity = 76/90 (84.44%), Postives = 87/90 (96.67%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTT+QKHRNFV+EPM +K VTDLAGIGE+LGKR+ SKGFDKAYVVLGQFL+LKKN+DLFV+WLKDLAGANSKQ++DCYQCL+DWCDEFL Sbjct: 1 MSTTTQKHRNFVSEPMNEKPVTDLAGIGEVLGKRMGSKGFDKAYVVLGQFLLLKKNKDLFVEWLKDLAGANSKQAADCYQCLNDWCDEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|926641126|ref|XP_013786687.1| (barrier-to-autointegration factor-like [Limulus polyphemus] >gi|926641128|ref|XP_013786688.1| barrier-to-autointegration factor-like [Limulus polyphemus] >gi|1238884799|ref|XP_022255014.1| barrier-to-autointegration factor-like [Limulus polyphemus] >gi|1238884802|ref|XP_022255015.1| barrier-to-autointegration factor-like [Limulus polyphemus]) HSP 1 Score: 167.933 bits (424), Expect = 1.557e-52 Identity = 75/90 (83.33%), Postives = 87/90 (96.67%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKH NFV+EPM DKAVTDLAGIGE+LG+RL+SKGFDKAYVVLGQFL+LKKNR+LF+DWLKD+AGANSKQ++DCYQCL DWC+EFL Sbjct: 1 MSSTSQKHTNFVSEPMGDKAVTDLAGIGEVLGRRLDSKGFDKAYVVLGQFLVLKKNRELFIDWLKDVAGANSKQATDCYQCLHDWCEEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|225719018|gb|ACO15355.1| (Barrier-to-autointegration factor [Caligus clemensi]) HSP 1 Score: 167.548 bits (423), Expect = 2.553e-52 Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTT+QKHRNFV+EPM +K VTDLAGIGE+LGKRL SKGFDKAYVVLGQFL+LKKN+DLFV+WLKD AGANSKQ SDCYQCL+DWCDEFL Sbjct: 1 MSTTTQKHRNFVSEPMNEKPVTDLAGIGEVLGKRLGSKGFDKAYVVLGQFLLLKKNKDLFVEWLKDSAGANSKQGSDCYQCLNDWCDEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|225710924|gb|ACO11308.1| (Barrier-to-autointegration factor [Caligus rogercresseyi] >gi|225711090|gb|ACO11391.1| Barrier-to-autointegration factor [Caligus rogercresseyi]) HSP 1 Score: 166.392 bits (420), Expect = 5.690e-52 Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTT+QKHRNFV+EPM +K V+DLAGIGE+LGKRL SKGFDKAYVVLGQFL+LKKN+DLFV+WLKD AGANSKQ+SDCYQCL+DWCDEFL Sbjct: 1 MSTTTQKHRNFVSEPMNEKPVSDLAGIGEVLGKRLGSKGFDKAYVVLGQFLLLKKNKDLFVEWLKDSAGANSKQASDCYQCLNDWCDEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|1325291149|ref|XP_023329831.1| (barrier-to-autointegration factor-like [Eurytemora affinis]) HSP 1 Score: 165.622 bits (418), Expect = 1.174e-51 Identity = 75/90 (83.33%), Postives = 86/90 (95.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTTS KHRNFVAEPM +K VTDLAGIG++LGKRLE+KGFDK YVVLGQFL+LKKN+DLFV+WLKDLAGAN+KQ++DCYQCLSDWCDEF+ Sbjct: 1 MSTTSLKHRNFVAEPMGEKPVTDLAGIGDVLGKRLEAKGFDKGYVVLGQFLLLKKNKDLFVEWLKDLAGANTKQATDCYQCLSDWCDEFV 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|1325291153|ref|XP_023329832.1| (barrier-to-autointegration factor-like [Eurytemora affinis]) HSP 1 Score: 164.466 bits (415), Expect = 3.801e-51 Identity = 74/90 (82.22%), Postives = 86/90 (95.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTTS KHRNFVAEPM +K VTDLAGIG++LGKRLE+KGFDK YVVLGQFL+LKKN+DLFV+WLK+LAGAN+KQ++DCYQCLSDWCDEF+ Sbjct: 1 MSTTSLKHRNFVAEPMGEKPVTDLAGIGDVLGKRLEAKGFDKGYVVLGQFLLLKKNKDLFVEWLKELAGANTKQATDCYQCLSDWCDEFV 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|242025321|ref|XP_002433074.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212518590|gb|EEB20336.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 163.696 bits (413), Expect = 6.802e-51 Identity = 72/90 (80.00%), Postives = 85/90 (94.44%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MSTTSQKHRNF+AEPM DK VTDLAGIGE+LGKR ESKGFDKAYVVLGQFL+LKK++++FVDW+KD+ AN+KQ++DCYQCLSDWC+EFL Sbjct: 1 MSTTSQKHRNFIAEPMGDKPVTDLAGIGEVLGKRFESKGFDKAYVVLGQFLVLKKDQEIFVDWMKDIINANTKQATDCYQCLSDWCEEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|675368039|gb|KFM60941.1| (Barrier-to-autointegration factor, partial [Stegodyphus mimosarum]) HSP 1 Score: 162.54 bits (410), Expect = 2.276e-50 Identity = 71/90 (78.89%), Postives = 86/90 (95.56%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKHRNFV+EPM DK V +LAGIGE+L KRLE+KGFDKAYVVLGQFL+LKK+++LF+DW+KD++GANSKQ+S+CYQCLSDWCDEFL Sbjct: 1 MSSTSQKHRNFVSEPMGDKLVNELAGIGEVLSKRLEAKGFDKAYVVLGQFLVLKKHKELFIDWMKDISGANSKQASECYQCLSDWCDEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|1022774649|gb|KZS18631.1| (Barrier-to-autointegration factor [Daphnia magna]) HSP 1 Score: 162.155 bits (409), Expect = 3.028e-50 Identity = 75/90 (83.33%), Postives = 83/90 (92.22%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKHRNFVAEPM DKAVTDLAGIG +LG RLE KGFDKA VVLGQFL+LKKN++LFVDWLKD AGAN+KQ+ DC+QCLSDWCDEFL Sbjct: 1 MSSTSQKHRNFVAEPMGDKAVTDLAGIGGVLGDRLEKKGFDKASVVLGQFLVLKKNKELFVDWLKDTAGANAKQAGDCHQCLSDWCDEFL 90
BLAST of barrier-to-autointegration factor vs. nr
Match: gi|1316173563|ref|XP_023232255.1| (barrier-to-autointegration factor-like [Centruroides sculpturatus] >gi|1316173565|ref|XP_023232256.1| barrier-to-autointegration factor-like [Centruroides sculpturatus]) HSP 1 Score: 161.384 bits (407), Expect = 5.417e-50 Identity = 71/90 (78.89%), Postives = 85/90 (94.44%), Query Frame = 0 Query: 1 MSTTSQKHRNFVAEPMTDKAVTDLAGIGEILGKRLESKGFDKAYVVLGQFLILKKNRDLFVDWLKDLAGANSKQSSDCYQCLSDWCDEFL 90 MS+TSQKH+NFV EPM DK V DLAGIGE+LGKRLE+KGFDKA+VVLGQFL+LKKN++LF+DW+KD+ G+NSKQ+SDCYQCLSDWCD+FL Sbjct: 1 MSSTSQKHKNFVTEPMGDKPVQDLAGIGEVLGKRLEAKGFDKAHVVLGQFLVLKKNKELFIDWMKDICGSNSKQASDCYQCLSDWCDDFL 90 The following BLAST results are available for this feature:
BLAST of barrier-to-autointegration factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of barrier-to-autointegration factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 13
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BLAST of barrier-to-autointegration factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold934_size79169:17509..17781- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold934_size79169-processed-gene-0.17 ID=snap_masked-scaffold934_size79169-processed-gene-0.17|Name=barrier-to-autointegration factor|organism=Tigriopus kingsejongensis|type=gene|length=273bp|location=Sequence derived from alignment at scaffold934_size79169:17509..17781- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'barrier-to-autointegration factor' has the following synonyms
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