Nucleolin, snap_masked-scaffold9_size846264-processed-gene-7.6 (gene) Tigriopus kingsejongensis

Overview


Name	Nucleolin
Unique Name	snap_masked-scaffold9_size846264-processed-gene-7.6
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000001436 (supercontig:LSalAtl2s:LSalAtl2s1245:53540:55574:-1 gene:EMLSAG00000001436 transcript:EMLSAT00000001436 description:"maker-LSalAtl2s1245-augustus-gene-0.16")

HSP 1 Score: 198.364 bits (503), Expect = 1.038e-61
Identity = 104/161 (64.60%), Postives = 122/161 (75.78%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKG 161
            MGDVL+LE VE+    +D   +      L+D +KRRKGRGF+D A+P +       +DRLD   +   A    PQRS+EGWILFVTGIHEEAQEDDIHD F++FGEIKN+HLNLDRRTGFLKGYALVEFETYKEAL+ KE+LDGSDLLGQ ITVDWAF+  
Sbjct:    1 MGDVLELENVEEFGEEEDSTVLQS----LKDKAKRRKGRGFDDFAEPRKSTG--SAFDRLDTTTSVDSAS--APQRSVEGWILFVTGIHEEAQEDDIHDSFSDFGEIKNVHLNLDRRTGFLKGYALVEFETYKEALSAKESLDGSDLLGQKITVDWAFLNN 153

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000011223 (supercontig:LSalAtl2s:LSalAtl2s76:1021176:1071154:1 gene:EMLSAG00000011223 transcript:EMLSAT00000011223 description:"maker-LSalAtl2s76-augustus-gene-10.12")

HSP 1 Score: 55.8398 bits (133), Expect = 5.802e-10
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0

Query:   79 EGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDW 156
            E W L +  +  + +E++  +  +EFG +K  HL     TG  KGYALVE++T   ++  K  LDG  L G T+  DW
Sbjct:  100 EQW-LCLAKLPMDLEEEEFENICSEFGGMKGYHLIRSDLTGKFKGYALVEYKTKSASIQAKHILDGHKLRGHTLEADW 176

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000010284 (supercontig:LSalAtl2s:LSalAtl2s682:101693:102685:-1 gene:EMLSAG00000010284 transcript:EMLSAT00000010284 description:"augustus_masked-LSalAtl2s682-processed-gene-1.0")

HSP 1 Score: 51.6026 bits (122), Expect = 1.306e-8
Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 0

Query:   83 LFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVK 160
            +FV  I  EA E+ + D F+E G + +  L  DR  G  KGY   E++    AL+    L+G ++ G+T+ VD A  +
Sbjct:   18 VFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALSAMRNLNGYEIEGRTLRVDNACTE 95

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000012522 (supercontig:LSalAtl2s:LSalAtl2s922:267828:272714:1 gene:EMLSAG00000012522 transcript:EMLSAT00000012522 description:"maker-LSalAtl2s922-augustus-gene-3.25")

HSP 1 Score: 50.447 bits (119), Expect = 1.734e-8
Identity = 25/81 (30.86%), Postives = 48/81 (59.26%), Query Frame = 0

Query:   82 ILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGP 162
             L + G+     E ++  +F++FG I+ + + LD +TG  +G+A V FE+ +++ A KE +   ++ G+ I VD++  K P
Sbjct:   73 CLGIFGLSLYTTERELEKEFSKFGPIEKVTVVLDGKTGRSRGFAFVYFESLEDSKAAKEAMCDQEIDGRRIRVDYSITKRP 153

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000008206 (supercontig:LSalAtl2s:LSalAtl2s495:203961:211464:1 gene:EMLSAG00000008206 transcript:EMLSAT00000008206 description:"augustus_masked-LSalAtl2s495-processed-gene-2.1")

HSP 1 Score: 50.447 bits (119), Expect = 4.475e-8
Identity = 22/78 (28.21%), Postives = 39/78 (50.00%), Query Frame = 0

Query:   79 EGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDW 156
             GW +FV  +  E +E+ +   F  FG ++N+ +  D +T   KG+  V    Y E L   ++L+G  L  + + V +
Sbjct:  303 SGWXIFVYNLAPETEENVLWQXFGPFGAVQNVKVIRDLQTNKCKGFGFVTMTNYDECLVAIQSLNGYTLGNRVLQVSF 380

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000002997 (supercontig:LSalAtl2s:LSalAtl2s170:527697:529148:-1 gene:EMLSAG00000002997 transcript:EMLSAT00000002997 description:"maker-LSalAtl2s170-snap-gene-5.26")

HSP 1 Score: 49.2914 bits (116), Expect = 8.906e-8
Identity = 26/76 (34.21%), Postives = 44/76 (57.89%), Query Frame = 0

Query:   80 GWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVD 155
             WI FV G++ +  E D+   F+++GEI +++L  D +TG  KGY  + +E  +  +   + L+   LL +TI VD
Sbjct:   37 AWI-FVGGLNYDLSEGDVISIFSQYGEIVHINLVRDGKTGKSKGYGFICYEDQRSTILAVDNLNAITLLKRTIRVD 111

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000008228 (supercontig:LSalAtl2s:LSalAtl2s496:349997:351002:-1 gene:EMLSAG00000008228 transcript:EMLSAT00000008228 description:"maker-LSalAtl2s496-augustus-gene-3.17")

HSP 1 Score: 48.9062 bits (115), Expect = 1.029e-7
Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   85 VTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKG 161
            V+ + E  QE D+ + F  FG I  + L  D++TG  KG+A + +   +EA     TL+G       ++V+WA   G
Sbjct:  211 VSNLSENTQESDVQELFKPFGAIARIFLAKDKQTGQXKGFAFIHYYKKEEAXKAIATLNGYGYDYLILSVEWAKPTG 287

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BLAST of Nucleolin vs. L. salmonis genes
Match: EMLSAG00000008292 (supercontig:LSalAtl2s:LSalAtl2s500:299484:305415:1 gene:EMLSAG00000008292 transcript:EMLSAT00000008292 description:"snap-LSalAtl2s500-processed-gene-3.78")

HSP 1 Score: 44.669 bits (104), Expect = 7.144e-7
Identity = 26/87 (29.89%), Postives = 42/87 (48.28%), Query Frame = 0

Query:   76 RSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGP 162
            +  E + +FV  +  E +   + + FA FGEI +  +  D +T   KGY  V F    EA +    ++G  L  ++I  +WA  K P
Sbjct:   18 KGTEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFTKKVEAESAITVMNGQWLGSRSIRTNWATRKPP 104

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BLAST of Nucleolin vs. SwissProt
Match: gi|251764995|sp|B5DGI7.1|RBM8A_SALSA (RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A)

HSP 1 Score: 182.956 bits (463), Expect = 2.063e-58
Identity = 100/164 (60.98%), Postives = 121/164 (73.78%), Query Frame = 0

Query:    1 MGDVLDLETV--EDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGP 162
            M DVLDL     ED    +DG    D+ + L++ +KRRKGRGF    + AR  V+ D YD ++ D       EPGPQRS+EGWILFVTG+HEEA E+DIHD+FAEFGEIKNLHLNLDRRTG+LKGYALVE+ETYKEA A  E L+G D++GQ I+VDW FV+GP
Sbjct:    1 MADVLDLHEAGGEDFAMDEDGD---DSIHKLKEKAKRRKGRGF-GSEEGARSRVRED-YDTVEQD-----GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGP 154

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BLAST of Nucleolin vs. SwissProt
Match: gi|55584089|sp|Q9V535.1|RBM8A_DROME (RecName: Full=RNA-binding protein 8A; AltName: Full=Protein tsunagi)

HSP 1 Score: 180.644 bits (457), Expect = 1.336e-57
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGF--EDRAKPARHAVKLDVYDRL---DGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            M DVLD++  E+ E  +DG         L++ +K RKGRGF  +   + A H+     Y+R+   D DE      EPGPQRS+EGWILFVT IHEEAQED+I ++F ++GEIKN+HLNLDRRTGF KGYALVE+ET+K+ALA KE L+G++++GQTI VDW FVKGP++ + S +
Sbjct:    1 MADVLDIDNAEEFEVDEDGDQ---GIVRLKEKAKHRKGRGFGSDSNTREAIHS-----YERVRNEDDDEL-----EPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVKGPKRVKKSEK 162

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BLAST of Nucleolin vs. SwissProt
Match: gi|82247070|sp|Q9DF42.1|RB8AA_XENLA (RecName: Full=RNA-binding protein 8A-A; AltName: Full=RNA-binding motif protein 8A-A; AltName: Full=Ribonucleoprotein RBM8A-A)

HSP 1 Score: 173.326 bits (438), Expect = 1.468e-54
Identity = 99/168 (58.93%), Postives = 121/168 (72.02%), Query Frame = 0

Query:    1 MGDVLDLETV--EDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGR 166
            M DVLDL     ED    +DG    D+ + L++ +K+RKGRGF   A         +VYD ++ D       EPGPQRS+EGWILFVTG+HEEA E+DIHD+F EFGEIKN+HLNLDRRTGFLKGYALVE+ETYKEALA  E L+G DL+GQ ++VDW FV+GP KG+
Sbjct:    1 MADVLDLHEAGGEDFAMDEDGD---DSIHKLKEKAKKRKGRGF--GADEGTKTRIREVYDSVEQD-----GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGK 158

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BLAST of Nucleolin vs. SwissProt
Match: gi|123915894|sp|Q28BZ1.1|RBM8A_XENTR (RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A)

HSP 1 Score: 172.555 bits (436), Expect = 2.618e-54
Identity = 100/169 (59.17%), Postives = 121/169 (71.60%), Query Frame = 0

Query:    1 MGDVLDLETV--EDIEGMDDGAAIADAANLLQDSSKRRKGRGF-EDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGR 166
            M DVLDL     ED    +DG    ++ + L++ +K+RKGRGF  D    AR         R D D   ++  EPGPQRS+EGWILFVTG+HEEA E+DIHD+F EFGEIKN+HLNLDRRTGFLKGYALVE+ETYKEALA  E L+G DL+GQ I+VDW FV+GP KG+
Sbjct:    1 MADVLDLHEAGGEDFAMDEDGD---ESIHKLKEKAKKRKGRGFGADEGTRARI--------REDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPISVDWGFVRGPPKGK 158

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BLAST of Nucleolin vs. SwissProt
Match: gi|82237769|sp|Q6PH90.1|RB8AB_XENLA (RecName: Full=RNA-binding protein 8A-B; AltName: Full=RNA-binding motif protein 8A-B; AltName: Full=Ribonucleoprotein RBM8A-B)

HSP 1 Score: 171.4 bits (433), Expect = 6.843e-54
Identity = 78/108 (72.22%), Postives = 92/108 (85.19%), Query Frame = 0

Query:   59 RLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGR 166
            R D D   ++  EPGPQRS+EGWILFVTG+HEEA E+DIHD+F EFGEIKN+HLNLDRRTGFLKGYALVE+ETYKEALA  E L+G DL+GQ ++VDW FV+GP KG+
Sbjct:   51 REDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGK 158

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BLAST of Nucleolin vs. SwissProt
Match: gi|82230908|sp|Q5D018.1|RBM8A_DANRE (RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A)

HSP 1 Score: 167.548 bits (423), Expect = 2.402e-52
Identity = 97/164 (59.15%), Postives = 121/164 (73.78%), Query Frame = 0

Query:    1 MGDVLDLETV--EDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGP 162
            M DVLDL     ED    +DG    ++ + L++ +K+RKGRGF    + AR  V+ D YD ++ D       EPGPQRS+EGWILFVTG+HEEA E+D+HD+FAEFGEIKNLHLNLDRRTG+LKGYALVE+ETYKEA A  E L+G +L+GQ I+VDW FV+GP
Sbjct:    1 MADVLDLHEAGGEDFPMDEDGD---ESIHKLKEKAKKRKGRGF-GSEEGARSRVRED-YDTVEQD-----GDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFVRGP 154

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BLAST of Nucleolin vs. SwissProt
Match: gi|10720244|sp|Q9Y5S9.1|RBM8A_HUMAN (RecName: Full=RNA-binding protein 8A; AltName: Full=Binder of OVCA1-1; Short=BOV-1; AltName: Full=RNA-binding motif protein 8A; AltName: Full=RNA-binding protein Y14; AltName: Full=Ribonucleoprotein RBM8A >gi|123782911|sp|Q27W01.1|RBM8A_RAT RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A >gi|251757320|sp|Q3ZCE8.2|RBM8A_BOVIN RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A >gi|1133968567|sp|Q9CWZ3.4|RBM8A_MOUSE RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A)

HSP 1 Score: 159.844 bits (403), Expect = 2.732e-49
Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 0

Query:    1 MGDVLDLETV--EDIEGMDDGAAIADAANLLQDSSKRRKGRGF-EDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFV 159
            M DVLDL     ED    +DG    ++ + L++ +K+RKGRGF  +    AR         R D D   ++  EPGPQRS+EGWILFVTG+HEEA E+DIHD+FAE+GEIKN+HLNLDRRTG+LKGY LVE+ETYKEA A  E L+G DL+GQ I+VDW FV
Sbjct:    1 MADVLDLHEAGGEDFAMDEDGD---ESIHKLKEKAKKRKGRGFGSEEGSRARM--------REDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFV 151

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BLAST of Nucleolin vs. SwissProt
Match: gi|1210274760|sp|B7FAL5.1|Y14A_ORYSJ (RecName: Full=RNA-binding protein Y14A; Short=OsY14a; AltName: Full=RNA-binding protein 8A)

HSP 1 Score: 157.147 bits (396), Expect = 7.580e-48
Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 0

Query:   34 KRRKGRGFEDRAKPARH----AVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            ++ KGRGF D A P       A +   +D L  D      G PGP RSIEGWI+ VTG+HEEAQEDD+H+ F +FG++KNLHLNLDRRTGF+KGYAL+E+ET++EA A  + LDG++LL Q I+VDWAF  GP K R  R+
Sbjct:   56 RKTKGRGFRDDAAPRDSRLAGAGRASDFDSLGSD------GGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRK 190

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BLAST of Nucleolin vs. SwissProt
Match: gi|1210274761|sp|F4I9J7.1|Y14_ARATH (RecName: Full=RNA-binding protein Y14; Short=AtY14; AltName: Full=RNA-binding protein 8A)

HSP 1 Score: 144.05 bits (362), Expect = 9.682e-43
Identity = 72/152 (47.37%), Postives = 104/152 (68.42%), Query Frame = 0

Query:   20 AAIADAANLLQDSSKRRKGRGF-EDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            +AIA A     +S+K+ KGRGF E++    +  +    ++ L  D      G PGPQRS+EGWI+ V+G+HEE QE+DI + F +FGEIKNL+LNLDRR+G++KGYAL+E+E  +EA +    ++G++LL Q ++VDWAF  GP  G + RR
Sbjct:   42 SAIAGANG---ESAKKTKGRGFREEKDSDRQRRLSSRDFESLGSD------GRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRR 184

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BLAST of Nucleolin vs. SwissProt
Match: gi|75119873|sp|Q6ATR0.1|Y14B_ORYSJ (RecName: Full=RNA-binding protein Y14B; Short=OsY14b; AltName: Full=RNA-binding protein 8A)

HSP 1 Score: 130.183 bits (326), Expect = 1.870e-37
Identity = 60/115 (52.17%), Postives = 87/115 (75.65%), Query Frame = 0

Query:   58 DRLDGDEAAREAGEPG--PQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            DR D   +  +AG PG  PQRSIEGWIL V+G+ E+A+EDD+++ F++FG +K+LHLNL+RRTG+ KGYALVE+E+++EA    + ++G+ LL +T+ VDWAF +GP +   S R
Sbjct:   68 DRFD---SLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLHLNLERRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPIQKLTSTR 179

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BLAST of Nucleolin vs. nr
Match: gi|290462697|gb|ADD24396.1| (RNA-binding protein 8A [Lepeophtheirus salmonis])

HSP 1 Score: 208.764 bits (530), Expect = 2.415e-66
Identity = 112/170 (65.88%), Postives = 131/170 (77.06%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            MGDVL+LE VE+    +D   +      L+D +KRRKGRGF+D A+P +       +DRLD   +   A    PQRS+EGWILFVTGIHEEAQEDDIHD F++FGEIKN+HLNLDRRTGFLKGYALVEFETYKEAL+ KE+LDGSDLLGQ ITVDWAFVKGP+K  +SRR
Sbjct:    1 MGDVLELENVEEFGEEEDSTVLQS----LKDKAKRRKGRGFDDFAEPRKSTGS--AFDRLDTTTSVDSAS--APQRSVEGWILFVTGIHEEAQEDDIHDSFSDFGEIKNVHLNLDRRTGFLKGYALVEFETYKEALSAKESLDGSDLLGQKITVDWAFVKGPKK--SSRR 160

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BLAST of Nucleolin vs. nr
Match: gi|1325304502|ref|XP_023333845.1| (RNA-binding protein 8A-like [Eurytemora affinis])

HSP 1 Score: 202.216 bits (513), Expect = 1.085e-63
Identity = 110/174 (63.22%), Postives = 128/174 (73.56%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAARE---AGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRK-GRASRR 170
            M D L+++  E    + DG    +  + L++ +KRRKGRGF+  A            DR DGD    E    GEPGPQRSIEGWILFVTGIHEEAQEDDIHD+F+EFGEIKN+HLNLDRRTGFLKGYALVE+ETYKEAL+ KE LDGSD+LGQ I VDWAFVKGPRK G+ SR+
Sbjct:    1 MADFLEVDNAE----VFDGDMEEENISRLKEKAKRRKGRGFDGAAS-----------DREDGDYDRVEDQAEGEPGPQRSIEGWILFVTGIHEEAQEDDIHDKFSEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALSAKEELDGSDILGQNIAVDWAFVKGPRKTGKKSRK 159

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BLAST of Nucleolin vs. nr
Match: gi|1121141065|ref|XP_019557675.1| (PREDICTED: RNA-binding protein 8A [Aedes albopictus] >gi|1000213667|gb|KXJ83062.1| hypothetical protein RP20_CCG009770 [Aedes albopictus])

HSP 1 Score: 199.134 bits (505), Expect = 1.803e-62
Identity = 105/169 (62.13%), Postives = 128/169 (75.74%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDG-AAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRAS 168
            M DVLD+   E+ E  +DG   IA     L++ +++RKGRGF + + P R A+    Y+RL  DE   E  EPGPQRS+EGWILFVT IHEEAQEDDI ++F EFG+IKN+HLNLDRRTGFLKGYALVE+ETYK+ALA KE L+GSD+LGQTI VDW FVKGP+K + S
Sbjct:    1 MADVLDIYNHEEFEVDEDGDQGIA----RLKEKARKRKGRGFGNESIP-REAID---YERLQDDE---EEAEPGPQRSVEGWILFVTSIHEEAQEDDIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNGSDILGQTIAVDWCFVKGPKKLKKS 158

[Close]

BLAST of Nucleolin vs. nr
Match: gi|170042888|ref|XP_001849141.1| (RNA-binding protein 8A [Culex quinquefasciatus] >gi|167866315|gb|EDS29698.1| RNA-binding protein 8A [Culex quinquefasciatus])

HSP 1 Score: 197.593 bits (501), Expect = 6.488e-62
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDG-AAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRAS 168
            M DVLD+   E+ E  +DG   IA     L++ +++RKGRGF + + P R A+    Y+RL  DE   E  EPGPQRS+EGWILFVT IHEEAQEDDIHD+F +FG+IKN+HLNLDRRTGFLKGYALVE+ETYK+ALA KE L+GS++L QTI VDW FVKGP+K + S
Sbjct:    1 MTDVLDIYNHEEFEVDEDGDQGIA----RLKEKARKRKGRGFGNESIP-REAID---YERLQDDE---EEAEPGPQRSVEGWILFVTSIHEEAQEDDIHDKFCDFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNGSEILTQTIAVDWCFVKGPKKLKKS 158

[Close]

BLAST of Nucleolin vs. nr
Match: gi|118787932|ref|XP_316392.3| (AGAP006365-PA [Anopheles gambiae str. PEST] >gi|116127037|gb|EAA11513.3| AGAP006365-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 196.438 bits (498), Expect = 2.519e-61
Identity = 103/169 (60.95%), Postives = 127/169 (75.15%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDG-AAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRAS 168
            M DVLD+   E+ E  +DG   IA     L++ +++RKGRGF + + P R  +    Y+RL  DE   E  EPGPQRS+EGWILFVT IHEEAQEDDI ++F EFG+IKN+HLNLDRRTGFLKGYALVE+ETYK+ALA KE L+GS++LGQTI VDW FVKGP+K + S
Sbjct:    1 MADVLDIYNHEEFEVDEDGDQGIA----RLKEKARKRKGRGFGNESIP-RETID---YERLQDDE---EEAEPGPQRSVEGWILFVTAIHEEAQEDDIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNGSEVLGQTIAVDWCFVKGPKKLKKS 158

[Close]

BLAST of Nucleolin vs. nr
Match: gi|157114117|ref|XP_001652167.1| (RNA-binding protein 8A [Aedes aegypti] >gi|108877401|gb|EAT41626.1| AAEL006748-PA [Aedes aegypti])

HSP 1 Score: 196.052 bits (497), Expect = 2.840e-61
Identity = 103/169 (60.95%), Postives = 127/169 (75.15%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDG-AAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRAS 168
            M DVLD+   E+ E  +DG   IA     L++ +++RKGRGF + + P R A+    Y+RL  DE   E  EPGPQRS+EGWILFVT IHEEAQEDDI ++F EFG+IKN+HLNLDRRTGFLKGYALVE+ETYK+ALA KE L+ S++LGQTI VDW FVKGP+K + S
Sbjct:    1 MADVLDIYNHEEFEVDEDGDQGIA----RLKEKARKRKGRGFGNESIP-REAID---YERLQDDE---EEAEPGPQRSVEGWILFVTSIHEEAQEDDIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNASEILGQTIAVDWCFVKGPKKLKKS 158

[Close]

BLAST of Nucleolin vs. nr
Match: gi|1101346669|ref|XP_018899142.1| (PREDICTED: RNA-binding protein 8A [Bemisia tabaci])

HSP 1 Score: 195.282 bits (495), Expect = 3.752e-61
Identity = 99/164 (60.37%), Postives = 123/164 (75.00%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRK 164
            M DVLD++  +DIE  +D A ++     L++ ++RRKGRGF        H  K +  DR D D       EPGPQRS+EGWILFVT +HEEAQE+DI+D+F+EFGEIKNLHLNLDRRTGFLKGYALVE+E+YKEA A K+ LDGS++LGQTI VDW FVKGP++
Sbjct:    1 MADVLDIDN-DDIEMDEDDARVSK----LKEKARRRKGRGFGVEKSAREHIQKYESVDRHDDDR------EPGPQRSVEGWILFVTSVHEEAQEEDINDKFSEFGEIKNLHLNLDRRTGFLKGYALVEYESYKEASAAKQALDGSEILGQTINVDWCFVKGPKR 153

[Close]

BLAST of Nucleolin vs. nr
Match: gi|568253497|gb|ETN62618.1| (RNA-binding protein 8A [Anopheles darlingi])

HSP 1 Score: 195.667 bits (496), Expect = 4.907e-61
Identity = 102/169 (60.36%), Postives = 127/169 (75.15%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDG-AAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRAS 168
            M DVLD+   E+ E  +DG   IA     L++ ++ RKGRGF + + P R ++    Y+RL  DE   E  EPGPQRS+EGWILFVT IHEEAQEDDI ++F EFG+IKN+HLNLDRRTGFLKGYALVE+ETYK+A+A KE L+GS++LGQTI VDW FVKGP+K + S
Sbjct:    1 MADVLDIYNHEEFEVDEDGDQGIA----RLKEKARHRKGRGFGNESIP-RESID---YERLQDDE---EEAEPGPQRSVEGWILFVTSIHEEAQEDDIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQAMAAKEALNGSEILGQTIAVDWCFVKGPKKLKKS 158

[Close]

BLAST of Nucleolin vs. nr
Match: gi|242247055|ref|NP_001156236.1| (RNA-binding protein 8A-like [Acyrthosiphon pisum] >gi|239788072|dbj|BAH70731.1| ACYPI007226 [Acyrthosiphon pisum])

HSP 1 Score: 195.282 bits (495), Expect = 6.888e-61
Identity = 98/173 (56.65%), Postives = 127/173 (73.41%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPAR---HAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGPRKGRASRR 170
            M DVLDL   E +E  D+G +       L++ ++RRKGRGFED++K       A++ D  D+ D D        PGPQRS+EGWILF++ +HEEAQEDD+HD+FAEFG+IKNLHLNLDRRTGFLKGYALVE+E+YKEA   +E L+ +D+LGQ I+VDW FVKGP++ + SRR
Sbjct:    1 MADVLDLNAEEFVEEDDEGVS------KLKEKARRRKGRGFEDKSKRDNIKDEAMEFDSVDQADDDG-------PGPQRSVEGWILFISSLHEEAQEDDLHDKFAEFGKIKNLHLNLDRRTGFLKGYALVEYESYKEAFRAREGLNNTDILGQQISVDWCFVKGPKRIKKSRR 160

[Close]

BLAST of Nucleolin vs. nr
Match: gi|1233165937|ref|XP_022184906.1| (RNA-binding protein 8A isoform X2 [Nilaparvata lugens])

HSP 1 Score: 194.897 bits (494), Expect = 7.447e-61
Identity = 101/162 (62.35%), Postives = 123/162 (75.93%), Query Frame = 0

Query:    1 MGDVLDLETVEDIEGMDDGAAIADAANLLQDSSKRRKGRGFEDRAKPARHAVKLDVYDRLDGDEAAREAGEPGPQRSIEGWILFVTGIHEEAQEDDIHDQFAEFGEIKNLHLNLDRRTGFLKGYALVEFETYKEALAGKETLDGSDLLGQTITVDWAFVKGP 162
            M DVL+L+  E+ E  DDG  IA     L++ +K+RKGRGF    K AR  ++   YD +D D+      EPGPQRS+EGWILFVT +HEEAQEDDIH++FAEFGEIKN+HLNLDRRTGFLKGYALVE+++YKEALA KE L+ +D+LGQ I VDW FVKGP
Sbjct:    1 MADVLELDNAEEFEADDDGDRIA----RLKEKAKKRKGRGFGGE-KTAREEIR--NYDSMDIDDNE----EPGPQRSVEGWILFVTSVHEEAQEDDIHEKFAEFGEIKNIHLNLDRRTGFLKGYALVEYDSYKEALAAKEALNNTDILGQQIGVDWCFVKGP 151

The following BLAST results are available for this feature:

BLAST of Nucleolin vs. L. salmonis genes
BLAST of Nucleolin vs. SwissProt
BLAST of Nucleolin vs. nr

BLAST of Nucleolin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 8


Match Name	E-value	Identity	Description
EMLSAG00000001436	1.038e-61	64.60	supercontig:LSalAtl2s:LSalAtl2s1245:53540:55574:-1...	[more]
EMLSAG00000011223	5.802e-10	37.18	supercontig:LSalAtl2s:LSalAtl2s76:1021176:1071154:...	[more]
EMLSAG00000010284	1.306e-8	34.62	supercontig:LSalAtl2s:LSalAtl2s682:101693:102685:-...	[more]
EMLSAG00000012522	1.734e-8	30.86	supercontig:LSalAtl2s:LSalAtl2s922:267828:272714:1...	[more]
EMLSAG00000008206	4.475e-8	28.21	supercontig:LSalAtl2s:LSalAtl2s495:203961:211464:1...	[more]
EMLSAG00000002997	8.906e-8	34.21	supercontig:LSalAtl2s:LSalAtl2s170:527697:529148:-...	[more]
EMLSAG00000008228	1.029e-7	32.47	supercontig:LSalAtl2s:LSalAtl2s496:349997:351002:-...	[more]
EMLSAG00000008292	7.144e-7	29.89	supercontig:LSalAtl2s:LSalAtl2s500:299484:305415:1...	[more]

BLAST of Nucleolin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|251764995\|sp\|B5DGI7.1\|RBM8A_SALSA	2.063e-58	60.98	RecName: Full=RNA-binding protein 8A; AltName: Ful...	[more]
gi\|55584089\|sp\|Q9V535.1\|RBM8A_DROME	1.336e-57	53.71	RecName: Full=RNA-binding protein 8A; AltName: Ful...	[more]
gi\|82247070\|sp\|Q9DF42.1\|RB8AA_XENLA	1.468e-54	58.93	RecName: Full=RNA-binding protein 8A-A; AltName: F...	[more]
gi\|123915894\|sp\|Q28BZ1.1\|RBM8A_XENTR	2.618e-54	59.17	RecName: Full=RNA-binding protein 8A; AltName: Ful...	[more]
gi\|82237769\|sp\|Q6PH90.1\|RB8AB_XENLA	6.843e-54	72.22	RecName: Full=RNA-binding protein 8A-B; AltName: F...	[more]
gi\|82230908\|sp\|Q5D018.1\|RBM8A_DANRE	2.402e-52	59.15	RecName: Full=RNA-binding protein 8A; AltName: Ful...	[more]
gi\|10720244\|sp\|Q9Y5S9.1\|RBM8A_HUMAN	2.732e-49	56.79	RecName: Full=RNA-binding protein 8A; AltName: Ful...	[more]
gi\|1210274760\|sp\|B7FAL5.1\|Y14A_ORYSJ	7.580e-48	56.03	RecName: Full=RNA-binding protein Y14A; Short=OsY1...	[more]
gi\|1210274761\|sp\|F4I9J7.1\|Y14_ARATH	9.682e-43	47.37	RecName: Full=RNA-binding protein Y14; Short=AtY14...	[more]
gi\|75119873\|sp\|Q6ATR0.1\|Y14B_ORYSJ	1.870e-37	52.17	RecName: Full=RNA-binding protein Y14B; Short=OsY1...	[more]

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BLAST of Nucleolin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290462697\|gb\|ADD24396.1\|	2.415e-66	65.88	RNA-binding protein 8A [Lepeophtheirus salmonis]	[more]
gi\|1325304502\|ref\|XP_023333845.1\|	1.085e-63	63.22	RNA-binding protein 8A-like [Eurytemora affinis]	[more]
gi\|1121141065\|ref\|XP_019557675.1\|	1.803e-62	62.13	PREDICTED: RNA-binding protein 8A [Aedes albopictu...	[more]
gi\|170042888\|ref\|XP_001849141.1\|	6.488e-62	61.54	RNA-binding protein 8A [Culex quinquefasciatus] >g...	[more]
gi\|118787932\|ref\|XP_316392.3\|	2.519e-61	60.95	AGAP006365-PA [Anopheles gambiae str. PEST] >gi\|11...	[more]
gi\|157114117\|ref\|XP_001652167.1\|	2.840e-61	60.95	RNA-binding protein 8A [Aedes aegypti] >gi\|1088774...	[more]
gi\|1101346669\|ref\|XP_018899142.1\|	3.752e-61	60.37	PREDICTED: RNA-binding protein 8A [Bemisia tabaci]	[more]
gi\|568253497\|gb\|ETN62618.1\|	4.907e-61	60.36	RNA-binding protein 8A [Anopheles darlingi]	[more]
gi\|242247055\|ref\|NP_001156236.1\|	6.888e-61	56.65	RNA-binding protein 8A-like [Acyrthosiphon pisum] ...	[more]
gi\|1233165937\|ref\|XP_022184906.1\|	7.447e-61	62.35	RNA-binding protein 8A isoform X2 [Nilaparvata lug...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold9_size846264	supercontig	scaffold9_size846264:802156..802668 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold9_size846264-processed-gene-7.6-mRNA-1	snap_masked-scaffold9_size846264-processed-gene-7.6-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold9_size846264:802156..802668+

gene from alignment at scaffold9_size846264:802156..802668+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold9_size846264-processed-gene-7.6 ID=snap_masked-scaffold9_size846264-processed-gene-7.6|Name=Nucleolin|organism=Tigriopus kingsejongensis|type=gene|length=513bp|location=Sequence derived from alignment at scaffold9_size846264:802156..802668+ (Tigriopus kingsejongensis)
ATGGGCGACGTGCTCGACCTCGAGACCGTGGAGGACATCGAAGGCATGGA
CGACGGAGCCGCCATCGCCGATGCCGCCAACCTCCTCCAGGACTCGAGCA
AGCGACGCAAGGGACGCGGGTTCGAGGACCGGGCCAAGCCAGCCCGCCAT
GCGGTCAAGCTGGACGTGTACGACCGACTGGACGGGGACGAGGCGGCCCG
TGAGGCGGGCGAGCCCGGCCCGCAGCGCTCCATCGAGGGCTGGATCCTCT
TCGTGACGGGCATCCACGAGGAGGCGCAAGAGGACGATATCCACGACCAA
TTCGCCGAGTTTGGCGAGATCAAGAATCTGCACCTCAACCTGGACCGACG
CACGGGATTCCTCAAGGGCTACGCGCTGGTCGAGTTCGAGACCTACAAGG
AGGCCTTGGCGGGCAAGGAGACCTTGGACGGCTCGGATCTCTTGGGCCAG
ACCATCACCGTGGATTGGGCCTTCGTCAAGGGGCCGCGCAAAGGGCGCGC
CAGCCGGCGATAG

Synonyms

The feature 'Nucleolin' has the following synonyms


Synonym
Tk08415

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