maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1, maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1
Unique Namemaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1021_size70145supercontigscaffold1021_size70145:63051..66603 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sodium potassium calcium exchanger nckx30c isoform x5maker-scaffold1021_size70145-snap-gene-0.16Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:82maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:82Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:83maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:83Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:84maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:84Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:85maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:85Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:86maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:86Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:87maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:87Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:88maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:88Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:89maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:89Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:90maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:90Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:91maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:91Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:92maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:exon:92Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:three_prime_utrmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983098Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983099Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983100Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983101Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983102Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983103Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983104Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983105Tigriopus kingsejongensisexon
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1021_size70145-snap-gene-0.16-mRNA-1:cds-1983106Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1983107auto1983107Tigriopus kingsejongensispolypeptide
Tk02177Tk02177Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02177

>Tk02177 ID=Tk02177|Name=Tk02177|organism=Tigriopus kingsejongensis|type=polypeptide|length=569bp
MSSTILRMHSSTTWSILIIAPFLLTASLANEVPQAGRRLLELGDENDGQG
LLISPQANDTADPLFPPDLFSSEQLSHGAVVFHFLGIIYMFYALALVCDE
YFVPSLDVIAEKLEISPDVAGATFMAAGGSAPELFTSIIGVFIAKSDVGI
GTIVGSAVFNILFVIAVCAFVAKEALSLTAWPLVRDVFFYSISLGLLVTF
FLDNQITWYEALILFLWYGTYVGFMAVNGTVEDFFRRILKQPPRNIDTHA
EGITLRSPKHRRGLFHLMNASIHPKVDQGPSSLSQESQPPVEYSLKDSDQ
ATDGGISMLKSHLQTGAPASDLNDLGQKSDDVGNIKLEGENQDNLPNPKW
DGNDDQLNVDEIATDEPIDMSFPKQGSPLGILVYVISLPIMLPLYCTLPD
TRNAKWRQFFMVTFVGSILWIAAYSYLMVWWATVVGSVLGIPDEIMGLTL
LAAGTSVPDLITSVLVARKGKGDMAVSSSVGSNIFDVTVGLPLPWLIYTV
AMGESVSVQSAGVGCSIGLLFSMLLLVFLSIVAFQWKMTKPMGMVMLVLY
FGFVAVSLGFSYELFLCPF
back to top

mRNA from alignment at scaffold1021_size70145:63051..66603-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1 ID=maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1|Name=maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3553bp|location=Sequence derived from alignment at scaffold1021_size70145:63051..66603- (Tigriopus kingsejongensis)
TTCAACTCATATTCTTCCTGAAATCCCAACACATATCACTTCATATTGGG
ACATTAGCTCAATGAGCTCAACAATTTTAAGGATGCATAGTTCCACCACT
TGGTCCATCTTGATAATCGCCCCATTCCTTCTGACTGCTTCTTTGGCCAA
TGAAGTTCCCCAAGCTGGCCGACGACTGCTCGAATTAGGGGATGAGAAGT
AAGTAACGACGGCTGTTTAACAATTGATTGTACCCCAAGCCTCTCATCAT
ACCTAGTGATGGCCAGGGATTATTGATCTCTCCTCAAGCGAATGATACCG
CTGATCCACTATTTCCACCCGACCTTTTTTCCTCTGAACAACTATCTCAT
GGAGCTGTGGTGTTCCATTTCTTGGGTATCATCTACATGTTCTATGCCCT
GGCCTTGGTGTGTGATGAGTACTTCGTGCCTTCCCTGGATGTGATTGCCG
AGAAGGTAAAGTAAAAGGCAGAAAAGTGCATTCACTCATTGGCATCGGTT
GGTTCTCTCGTAATTGCGACCATGCTGAGTGATCCCACCAGACTTTTGGA
ACGTATGTACGTTTGCCTCCACAGCTAGAGATCAGCCCTGATGTAGCTGG
AGCAACCTTTATGGCGGCCGGAGGATCTGCTCCTGAGCTCTTCACCTCAA
TCATTGGTGTGTTTATAGCAAAGAGTGACGTGGGTATTGGTACCATCGTT
GGCTCAGCCGTGTTCAATATCCTTTTCGTGATCGCAGTCTGCGCATTTGT
GGCCAAGGAAGCTCTCAGGTAAGTCGAAACTCCTTGAAAAGCCTCTTTGA
GGTACACCCGTCGATTGATCCTTATAGCTTAAAAGCCCGTGCAGCCCCTT
TAATACATCAACCAATGTTTAGTCTCACAGCTTGGCCGTTGGTTCGGGAT
GTCTTTTTCTACTCCATATCCTTGGGCCTCTTGGTGACTTTACGCATTCA
TAAGGTGGAACAACCCTCGTCGATGCTTTGGAGAGCGTAAAGTGATCCCC
TCGGCGTGAGTGTCGATGTTCTGAAACCAAGAGTAGACATTTCAATTGTG
CTACAATTCCGATAATGAACTACGAATGAATGTTGCTTCAATTTTACCCT
CGGAGGCTGTTTGAGAATTCTTCGAAAGAAGTCCTCCACAGTCCCGTTCA
CGGCCATGAACCCAACGTAGGTACNCCACAGCTAGAGATCAGCCCTGATG
TAGCTGGAGCAACCTTTATGGCGGCCGGAGGATCTGCTCCTGAGCTCTTC
ACCTCAATCATTGGTGTGTTTATAGCAAAGAGTGACGTGGGTATTGGTAC
CATCGTTGGCTCAGCCGTGTTCAATATCCTTTTCGTGATCGCAGTCTGCG
CATTTGTGGCCAAGGAAGCTCTCAGGTAAGTCGAAACTCCTTGAAAAGCC
TCTTTGAGGTACACCCGTCGATTGATCCTTATAGCTTAAAAGCCCGTGCA
GCCCCTTTAATACATCAACCAATGTTTAGTCTCACAGCTTGGCCGTTGGT
TCGGGATGTCTTTTTCTACTCCATATCCTTGGGCCTCTTGGTGACTTTTT
TCCTAGATAACCAGATCACTTGGTATGAAGCACTGATCCTCTTCCTCTGG
TATGGTACCTACGTTGGGTTCATGGCCGTGAACGGGACTGTGGAGGACTT
CTTTCGAAGAATTCTCAAACAGCCTCCGAGGGTAAAATTGAAGCAACATT
CATTCGTACTTCATTATCGGAATTGTAGCACAATTGAAATGTCTACTCTT
GGTTTCAGAACATCGACACTCACGCCGAGGGGATCACTTTACGCTCTCCA
AAGCATCGACGAGGGTTGTTCCACCTTATGAATGCGTCAATTCACCCAAA
AGTGGACCAAGGTGGGTCTGCTGCCTCAGCAATTACATCCTTTTTGAGTT
GATGGACGCCTAACGGGGACACTTTGTAGAGGGATTTATTACATTTATGG
TTTTAACATATGTTTCGCCAATCAGGCCCATCTTCGCTCAGTCAGGAAAG
CCAACCGCCCGTTGAATATTCGCTCAAAGGTGATTGTTGTCAGTATTACT
CCTAACAGTCAGGCACTTCATTGGACATTTATCTAGACTCAGACCAAGCT
ACAGATGGAGGCATAAGCATGTTAAAGTCACATTTGCAAACTGGAGCTCC
GGCCTCAGATCTCAACGACCTTGGGCAGAAGAGCGACGATGTTGGTAATA
TCAAACTGGAAGGTGAAAATCAAGTGAGTATTCATTGTCGTCTCTAGCTT
TATCCCGACGACGTGTTGGATGTCGTCCAGGCATTTCATTCCATCAATCA
AAATAACTAAGGTGTGGTCGAAATAGCATACCGCCGTTTTGATCGATTCC
TGACGGCTATTTATAGGATAATCTTCCCAATCCCAAATGGGATGGAAACG
ATGACCAGCTCAACGTAGATGAGATTGCTACTGATGAGCCGATCGACATG
TCGTTCCCCAAGCAAGGGAGCCCTCTGGGCATCCTCGTCTATGTCATTTC
TCTGCCCATCATGCTGCCCCTCTATTGCACTCTCCCAGATACTCGCAATG
CCAAATGTAACTCCAGCGGACACTGTGTTGGTGGATGCATCAATTGGATC
TATGTATTCTTTATGTCATAGGGCGACAATTCTTCATGGTCACATTTGTC
GGGAGTATCCTCTGGATTGCAGCATATTCTTATCTTATGGTCTGGTGGGC
CACTGTGGTGGGATCTGTGCTTGGCATTCCGGACGAGGTAACAATTCATG
GTTGCAATGATTTGGCTTCAACTATTTAATTTGGCCCAGGCAGGAGTATC
CATTTCCGAATTGAATGAGGGGAAATATTTCCCAAATGCCAGTAAATCGC
CTCATTGGCCTTATGGCCAATGCATTAAATCATTCGCTGTTTCATATAAA
TGTTAGATCATGATTGTCTTCAAATATAATGAGCACAAGCAAGCCATTGG
CCTACTAGTCAGCCCACCAAGCTGTCCCATATCCACAGCCTCGGGGCATA
AATTACGCCTTTTGTTTCTCAGATCATGGGATTGACTCTCTTGGCGGCAG
GAACGTCCGTGCCTGATCTCATCACGAGCGTCTTGGTGGCTCGAAAGGGG
AAAGGGGACATGGCCGTGTCATCATCGGTGGGATCTAATATATTTGACGT
CACAGTTGGGTATGGAGTGCTGAAACATTTCATTCACAGTGAAAATGTAG
AGTCATAAAGATTGTTGACCTTTCCCATTTTTTATTTTCCCAGGTTACCT
TTGCCCTGGCTAATCTACACGGTTGCCATGGGCGAGTCCGTCTCGGTTCA
GAGTGCTGGGGTGGGATGCTCCATTGGGTTGCTGTTTTCAATGCTTCTCC
TGGTGTTTCTCAGCATTGTGGCCTTTCAATGGAAAATGACCAAACCCATG
GGAATGGTTATGTTGGTGCTTTACTTTGGGTTTGTCGCCGTGTCTTTGGG
TTTCTCGTATGAACTATTTTTATGTCCCTTTTAATTCAAGCTGGTCATGG
TTGGGTCATGTTAAATATCAGCTTTTACCAAGTTGGGAATATGCATCTTA
AGG
back to top
Add to Basket