Tk02177, Tk02177 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02177
Unique NameTk02177
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length569
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 84..225
e-value: 1.4E-28
score: 99.6
coord: 410..558
e-value: 1.2E-31
score: 109.6
IPR004481Sodium/potassium/calcium exchangerTIGRFAMTIGR00367TIGR00367coord: 82..553
e-value: 6.7E-99
score: 328.9
IPR004481Sodium/potassium/calcium exchangerPANTHERPTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERcoord: 64..567
NoneNo IPR availableGENE3D1.20.1420.30coord: 381..559
e-value: 3.2E-30
score: 107.1
coord: 115..239
e-value: 1.2E-28
score: 102.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..354
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 468..478
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 563..569
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 232..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 510..532
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 499..509
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 533..543
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..498
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 434..444
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 544..562
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 409..433
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..467
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.762
NoneNo IPR availableTMHMMTMhelixcoord: 410..432
NoneNo IPR availableTMHMMTMhelixcoord: 187..202
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 547..566
NoneNo IPR availableTMHMMTMhelixcoord: 445..467
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 512..534
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 480..502
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 376..398

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1maker-scaffold1021_size70145-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02177 ID=Tk02177|Name=Tk02177|organism=Tigriopus kingsejongensis|type=polypeptide|length=569bp
MSSTILRMHSSTTWSILIIAPFLLTASLANEVPQAGRRLLELGDENDGQG
LLISPQANDTADPLFPPDLFSSEQLSHGAVVFHFLGIIYMFYALALVCDE
YFVPSLDVIAEKLEISPDVAGATFMAAGGSAPELFTSIIGVFIAKSDVGI
GTIVGSAVFNILFVIAVCAFVAKEALSLTAWPLVRDVFFYSISLGLLVTF
FLDNQITWYEALILFLWYGTYVGFMAVNGTVEDFFRRILKQPPRNIDTHA
EGITLRSPKHRRGLFHLMNASIHPKVDQGPSSLSQESQPPVEYSLKDSDQ
ATDGGISMLKSHLQTGAPASDLNDLGQKSDDVGNIKLEGENQDNLPNPKW
DGNDDQLNVDEIATDEPIDMSFPKQGSPLGILVYVISLPIMLPLYCTLPD
TRNAKWRQFFMVTFVGSILWIAAYSYLMVWWATVVGSVLGIPDEIMGLTL
LAAGTSVPDLITSVLVARKGKGDMAVSSSVGSNIFDVTVGLPLPWLIYTV
AMGESVSVQSAGVGCSIGLLFSMLLLVFLSIVAFQWKMTKPMGMVMLVLY
FGFVAVSLGFSYELFLCPF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb
IPR004481K/Na/Ca-exchanger
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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