maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1, maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1023_size69924-snap-gene-0.11-mRNA-1
Unique Namemaker-scaffold1023_size69924-snap-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1023_size69924supercontigscaffold1023_size69924:14379..18537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sodium-dependent nutrient amino acidmaker-scaffold1023_size69924-snap-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:214maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:214Tigriopus kingsejongensisexon
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:215maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:215Tigriopus kingsejongensisexon
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:216maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:exon:216Tigriopus kingsejongensisexon
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:five_prime_utrmaker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:cdsmaker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:cdsmaker-scaffold1023_size69924-snap-gene-0.11-mRNA-1:cds-1961747Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1961748auto1961748Tigriopus kingsejongensispolypeptide
Tk02659Tk02659Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02659

>Tk02659 ID=Tk02659|Name=Tk02659|organism=Tigriopus kingsejongensis|type=polypeptide|length=235bp
MVIITEKEALAKPINFILKKARTPSESRGEAKGHSTSSAEEREAAIAVDI
KDGGTLEAVGPTDPARGTWGSDLDFAMSCIAYAVGLGNVWRFPYLCFKNG
GGAFLIPYFIAMFTCGIPLFLLEVSVGQYLGVGGMSVVGQLCPIFKGVGY
AALMMVFLENVYYIVIVAWTLFYILNTLFSLGNDLPWSTCGQGNGSWAGE
NCFNPEGSLPYNESEPFLKYGLIEKDTQTPVEAYW
back to top

mRNA from alignment at scaffold1023_size69924:14379..18537+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1 ID=maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1|Name=maker-scaffold1023_size69924-snap-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4159bp|location=Sequence derived from alignment at scaffold1023_size69924:14379..18537+ (Tigriopus kingsejongensis)
TCCCTTTCGAGTTGGACGTGGTCGAGCGAGTGCTCATCCTATACTGTCCT
CATCCCACTGAGCGTCAGAGAGAGAGCAGACCCAAATCCACCCATTCCGG
ACCCGCCGTGTACTGAAAGCGTGCCACCATGGTGATCATCACCGAGAAGG
AGGCTCTCGCCAAGCCGATCAACTTCATCCTGAAGAAGGCCCGAACTCCG
TCCGAGAGTCGAGGCGAGGCCAAAGGCCATTCCACCTCATCGGCGGAAGA
AAGAGAGGCCGCAATTGCCGTCGACATCAAGGATGGGGGAACGTTAGAAG
CAGTTGGCCCCACCGATCCCGCGAGGGGGACTTGGGGCTCCGACCTCGAC
TTTGCCATGTCCTGCATTGCCTATGCAGTGGGATTGGGCAATGTTTGGCG
ATTCCCCTACCTATGCTTTAAGAACGGAGGGGGTGAGTTCTGCTCAACGG
TCTTTGACTTTCTTATACAGTATGTATCCGACACGGGAATGCGTGTCCAC
GAGCGATCCCTGGTGACCCAGATAGCAACGCCTCCAGGAGGCGTCAGGGC
TTTGTCCTTCTTTGTGCACGAATCCCTGTAACCACCAGCTGGCTTGAGAG
AATGGATTCCCCTTGGGCAGAAGGAGCCTGGGTGGGAAACCAAGATTGTC
CGCCCTTTTTCGCTCACCGTCTCTTTCCAGTCCGACTGACACGTTTTGAT
GTAGCCATTGCAAAATAGGAAAGCTCGCAGACTGGCGTTTATCCTTGGAA
GAGCAGCTTGGTTAATCGCCATCAATTCCGATCCGATTGCAATGCCGAAC
GCACGCAATCATGAAGCCTCGAGGTAACTGCTTGCATGTCGTGGAGGGAA
AATTCAGAGAACCAATAGTTCGTCGCCAGGTCTGGAACCCGAAACAATCT
TGATGGGAATCCCGATGGCGAACAATCTTTAGCACTCGGTTTTAAACAAG
ATGACGTCTTTTGCTGCTCCACACTCATTGAGAGTCAGACATAATCGACG
TTGACAAATGAGATCTGGGATCGCACGAGCTAGGGAGAATAGCGAGTTCC
AATGCACCTGAATGACGCGGAATCGGGGACAGGGCAAAGCCACAATGATG
TACTCACTCGTGCTCTTGAGCCTTGGATCGGGTCCAAGTCCTCAGGATTT
CTAGAAAGTGGCTGTCAAAACATGCTGACACGATCTCACCTCTTCCCTGC
GCACACTCAGGGGAGATTGTCGGAAGAACACAACTTCCACCTCTGTACAG
CAAATAGGCCTCGTGTGACCTTAAAAAGTGCAACTGCTCCAGGCTCGTTA
GCTCTGTCCCTGACTGCTTCACTCTTCTTGGGTCTTGGCTCATCCCGCAA
AGTTTGCAATGCGTTAATGAGTCTCTTGTCGAATTGCATCGCTCTGGTGG
GGTCAAAAAAACTGGTTATCGAGTCAACGCGATCCTCATCAACGAGTCCC
TGACCACATCGACCAAAGCGTCTTGGACACAGTACTATCTAAGCACTCTT
AACAGGATGTCTGCCATTGACTCAAGAGCAACACGGTGGTCGGAAAATTT
GTGCATGTGTCTCCTCGCTTGTTCCACCTTCCATTAGGAGAGACAGGAGA
AGAGTGAAGAACGACTCCTCAAATTGACTTTGTCAAGAGTATCTTTGTTC
AGGGCTTGGGCGGCCTAATTGAGCCACAGAATTAAGCACCATGCTTATCA
TCTATCCCGAGTGGTACGAGGCTTATGTCTCCAGTTGTAAAGGGGGAGAG
AGACCTTCGTATCGATCGGAGGAAATTAGGATGTTCCTCTCTGCGTTTTC
ATGCATCCAAGAGAGCTTGGAGGGTGTCTCTCAAAGTACCCAATCCTTCG
GGTTGGTGTTTTGTGGTGACCCTATTTAATATCGGAGCCCATTCAGAGCC
CTGGATATTTATCGGCCATGTCGAGCGTATGTATGTACTACATGGCCAGG
CAACATGCTCCCTTCCACATGTATCCTCTGATTCTTGGCAAAAAGTTGCC
GTCCGAACTGACTTTTATGTACGTTAGTCAATTGACGTAATGGGCCTCAA
GTGGTCGAGGGTCAGTAGCATTGGGCTGACTCCCCCAGCGCGAATGAGGA
TATCGATTGTAATTTATAGCATCGCCCATATCCTCTTCATAGAACTTGGA
CGAACGAGTGGACCAGTCAGTCTCCTCGTTGCTTTGAGTACGCGATCCCG
TTTCATCATTGACTCGAGCTATTTTAAGCCGAGCCCTGATCAGTTTTGCT
TTGATCCATATTCATGGCGAGAGCTCTTCTTCCACCTTGCAAGCTCAAAG
CCAAAGATCAAATTGATGAGCACGCAAACTTTGTCAAGGATGATTGGATC
TCCACATGATTGGTGGGCTGATGTTCCATATTACGTTGGCCTTTGCCAAT
AAAGGCTTCTCTTCGTCGACATAATGAGCTTCCATAGTCGCCAAATTTGG
CCTAGCTAGAACGCAAGCACACTCTAGTACGCTCCAACGATCTAACGTTA
CATCTGAATTTTACATAATTGAAGCCGATGTCACTAGGTTGCCTGGTCAT
TAGCCAGAGCAATCGTCAACCTAAACTCGATCCTTGGAGCACACCAACAA
TTGATATCAACCGAGTAAAGGTTTAGTAGATGAATAGCCTACCTTTCGGC
CTTGATCGAGTTACGGTTCAACTTACTGCCGATCGGTGGTCGTCCATGAG
GCGTTGACAGCTCTCGGTGTTCGACTGGCCCGTCTGGGGCTTGCATTCCT
CGAGATATCCTCTTGCTCCCTTATGAGGGCCAATACTCGTCGAAAGAAAT
TGTTTAGCATTCAATAAGAACACAGGCAAAGAAACATGAAACATCTGTTG
CACTGACCAATGTTGGCCGTCCACATGTGTTGCCCTCAGGAGTAATTGGA
ACTAATTAATTACCCAATCAAAGAGCCAAGTTGTCTCATTATTCGTGTTA
CCCTTCTCCGTTTCAGGCGCCTTTCTCATTCCTTACTTCATTGCCATGTT
CACCTGTGGAATCCCCTTGTTCCTCCTCGAGGTCTCAGTGGGCCAATACC
TAGGGGTTGGAGGCATGAGTGTGGTCGGGCAACTCTGTCCGATCTTTAAA
GGAGTTGGTTATGCTGCCCTGATGATGGTCTTCTTGGAGAACGTGTACTA
CATTGTGATTGTTGCTTGGACCCTGTTTTATATCCTGAACACGCTTTTCT
CCCTTGGAAACGATTTGCCCTGGAGCACCTGTGGACAAGGAAGTAAGTCA
TGCACGACATTGGGGGGAGAATGGGGAACCTGAGGAATATGACGCCGTTA
CCCATACAATAACTCCTGTTATAACAACCGTTCACATTTTTTCCTGCGCA
GATTACTCTTGGATGGGTATGTATTCAGGGAGTTGAGTGCCTAACTTACT
TATTGTAGAGTTCGTATAACAGGTGTACATACCTACATATCGCGCAGTTG
GCCTGTCCCAACGGAAAACACAAGTTTGACCTCTACGTGTCAATCTTGTC
TGACCTCCAGCTTTTGAGGTGGAAAAAGTAAGCCTTTCGGGCGAGGAGGA
ATGCAGTCTCGCGGCCTCCCCGCTCTGGCCTTGGGATCATTTTGTTTCAC
CAAAAGTGATGACGAATGAAATCTAATTTGATTCGCCTGATGGCCAAAAT
TGAACGAGTTCTTGGTGCCAAGGAAGGCTGTTCTCATTTTGGCGCCACTG
AGCTCCCCCAGCGCTAGCAAAAGTCAGAGACAATATGTACATGGAAACCC
TGGGCCAATGCTCCCTTTGCCCAGCTTTGAGGATTGATCAACATTCGTCC
CAGGGATTGATTGTCGTCCTCATGCAATCCGCTCATTTCAATGTTAGTTA
GGCAAAATTCGTCCATCTCGTCGTTTACCCTACTACGTAAATTACGTACA
TACTGTCATGGTACTGTACAGTACACTCGGTGCTTTTTCAAGCACAAGCG
TCTCTAGGTGTGCGTGCTTCTCGTTTGGCGTGTGTATCCTTCAGCCTTGA
CTTGCCAGTGAACCCCTGTCGATTTGAATTTTAGACGGATCGTGGGCCGG
TGAGAACTGCTTCAATCCGGAAGGAAGCCTCCCCTACAATGAATCGGAGC
CGTTCCTCAAGTATGGTCTGATCGAGAAGGATACTCAGACTCCCGTCGAG
GCTTATTGG
back to top
Add to Basket