maker-scaffold109_size355148-snap-gene-1.20-mRNA-1, maker-scaffold109_size355148-snap-gene-1.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold109_size355148-snap-gene-1.20-mRNA-1
Unique Namemaker-scaffold109_size355148-snap-gene-1.20-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold109_size355148supercontigscaffold109_size355148:91996..94667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
translation initiation factor eif-2b subunit epsilonmaker-scaffold109_size355148-snap-gene-1.20Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:81maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:81Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:82maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:82Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:83maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:83Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:84maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:84Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:85maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:85Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:86maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:86Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:87maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:exon:87Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:five_prime_utrmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cds-1991833Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cds-1991834Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cds-1991835Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cds-1991836Tigriopus kingsejongensisexon
maker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cdsmaker-scaffold109_size355148-snap-gene-1.20-mRNA-1:cds-1991837Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1991838auto1991838Tigriopus kingsejongensispolypeptide
Tk11030Tk11030Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11030

>Tk11030 ID=Tk11030|Name=Tk11030|organism=Tigriopus kingsejongensis|type=polypeptide|length=670bp
MLPPLKKEESLQAVIIGDSYDKKFGPLTLDTPRCLLPVCNRPLLSYALAS
LKSCGVQDIILYCTSHADQVKKFVNESAADPSAITVITNEDCRSFGDAIR
DLDAKGLLRQNFILMQGDTIANIDLAPILETHKQSIAQDRNASMTLVYRK
AAPGHPCRTLEDEMFVAIDGKGNRILHHQRALAGKFNVPLEIFDDIDAVR
LCFDLMDVGIAVCSPAIPPLFADNFDFQTMEDFLKGVMENDLVDNTIYMH
EITEEYAARASNLLTYQAVTRDVLSRWSYPFVPDLMSLPQDQGQVYKYGR
HNVYTGQGLVLGKGSSLKQNVIVGHGSKIGQNSVISDSALGQNCSIGQNV
LIRNSILLDGVVVEDNCQILGSVVGQKSILRQGAVIEDKSVLGSEVEIDP
DMVVPSRSRLTNAPGDDGFSDDDNDDEGTKFGSKAFKFVDELEDDDDDDD
EVAAIARDVWGLSLADVHVSDEDSSSDESDIEGLEDAGDIMLDEDAKFSV
FKAEVFESLQRGLKEGIKADNLILEINSSRHAYAVSANQVVHSVFSSILN
VARQQEGDLTGPKLLKEIQKTTQAFVPILSKYVKDQSAQIEALLTLEQHC
HDHSEFVPVAMKTIHFLYELDVLSEDSILSWFAQSDPLPGFSVGFRQKIQ
PFIDWLEESDYDDDDDDDSE
back to top

mRNA from alignment at scaffold109_size355148:91996..94667+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold109_size355148-snap-gene-1.20-mRNA-1 ID=maker-scaffold109_size355148-snap-gene-1.20-mRNA-1|Name=maker-scaffold109_size355148-snap-gene-1.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2672bp|location=Sequence derived from alignment at scaffold109_size355148:91996..94667+ (Tigriopus kingsejongensis)
CTGGTTGGCATTCGGCCTGGTCAACGCAGCCTTCATAAAAGTGCTGAAGA
TCTGGTGCCTGGAAAAGGAAGCCAACTCATAGAGAGCCACGATGAACCTA
ATTCGGATGCCTTTCATGGCATGGCTCAATGGAGGTCGAGCTGAGTGCCC
TAACAGTTTAGCGGTCACTCGCATCTTCTGATGCAATGTCAACAAGAGAT
CCACAACTACGTGCAGAGTGCTTTGATCTAATCGTCCAGCATCCTTTGGA
TCCCAAGTCCCAGTTGCTCGAGTCCTCATGTTGCCGCCACTGAAAAAGGA
GGAATCCCTCCAAGCCGTCATCATCGGCGACTCTTACGATAAGAAGTTTG
GGCCTCTCACCCTTGACACGCCACGGGTACGGAGGAGAGTGAGACGCCAA
GTATGCAGAGCTTTCATGGGATGTGTCTCGTTTCAGTGCCTTTTGCCGGT
GTGCAATCGACCTCTCCTCTCCTATGCCTTGGCTAGCTTGAAATCCTGCG
GGGTGCAAGACATTATCCTCTATTGCACCTCCCACGCGGATCAGGTGAAG
AAGTTCGTCAACGAGAGCGCTGCCGACCCCAGCGCCATCACGGTCATCAC
CAATGAGGATTGTCGCTCCTTTGGCGATGCCATCCGCGACTTGGATGCCA
AAGGCTTGCTCCGACAGAACTTTATCCTCATGCAGGGCGACACGATTGCC
AACATCGACTTGGCGCCGATTCTGGAAACTCACAAGTAGGCAGGGCAATC
CCCTCGGTCAAGTCCGGAATTCGAGCACTTGAGACGTTTTGCAGGCAGAG
CATCGCTCAGGATCGGAATGCCTCCATGACCTTGGTCTATCGCAAGGCGG
CTCCCGGCCACCCCTGTCGCACCCTCGAGGATGAGATGTTCGTGGCCATT
GATGGGAAAGGAAACCGAATACTGCACCATCAGCGAGCCCTAGCCGGGAA
ATTCAATGTCCCCCTCGTAAGCATAGTGGGATTGGATAGGGGATCTGAAC
TAATGCTCACCTGTTTGTTGGGTGTAGGAAATTTTCGACGACATAGATGC
GGTTCGCTTATGTTTCGATCTTATGGATGTGGGCATCGCTGTTTGCTCTC
CGGCCATTCCACCTCTGTTTGCGGATAATTTCGATTTTCAAACCATGGAA
GACTTCTTGAAAGGCGTGATGGAGAACGATCTCGTGGATAACACAATCTA
CATGCACGAGATCACGGAGGAATATGCGGCCCGGGCATCCAACCTGCTCA
CCTACCAAGCCGTGACCCGAGATGTGTTGAGCCGTTGGAGTTACCCGTTC
GTTCCCGATTTGATGAGCCTGCCCCAGGACCAGGGGCAGGTGTATAAGTA
TGGACGACACAACGTGTATACGGGACAAGGTCTAGTCCTGGGAAAGTAAG
CGCTAGCCAATCTCGCAAGCCACCTAAGAGCATTGCTTTGAATTCGCTTG
TCTTCCAGAGGCAGCTCCTTGAAGCAAAATGTGATTGTGGGCCACGGGTC
AAAGATTGGACAGAACTCCGTCATAAGCGATAGCGCCTTGGGGCAAAATT
GCTCGATTGGTCAGAATGTGCTTATTCGGAACTCCATTCTACTCGATGGT
GTGGTCGTGGAGGATAACTGCCAGATCCTGGGCTCGGTTGTTGGACAAAA
GTCCATTCTCCGCCAAGGTGCGGTGATCGAAGATAAGTCTGTCCTGGGCT
CGGAGGTGGAAATCGATCCAGACATGGTCGTGCCCTCGCGCTCGCGTTTG
ACCAACGCTCCTGGCGATGATGGGTTTTCCGATGACGACAATGACGACGA
AGGTAATGAATGGGCACCTCTCATCGAGCTCCCAGGTGGGCATCGTTTGA
TAAGCTTGCTCCACTAGGTACCAAATTTGGATCGAAAGCCTTCAAGTTTG
TGGACGAATTGGAAGATGACGATGACGACGACGATGAGGTTGCAGCCATC
GCTCGCGATGTTTGGGGACTCTCGCTGGCCGATGTTCATGTGAGCGATGA
GGATAGCTCAAGCGACGAATCGGACATCGAGGGTCTCGAAGACGCCGGCG
ATATCATGTTGGATGAGGATGCCAAATTTTCAGGTTGGCTCATTTCCCCG
CCCTCTACTCCCTCAATCTCTCATGGGCTGAGCTTTTTGTCCTTCTTATG
CTTCTAGTGTTCAAAGCTGAGGTGTTTGAGTCCCTTCAACGAGGTCTCAA
AGAGGGAATCAAGGCGGACAACTTGATACTTGAAATCAACTCCTCACGCC
ATGCTTATGCCGTAAGTGCCAATCAAGTGGTGCACAGTGTCTTCTCCTCA
ATTCTCAACGTGGCCAGGCAGCAAGAAGGAGATTTGACCGGTCCAAAATT
GCTCAAAGAAATCCAGAAAACCACCCAGGCCTTTGTCCCCATTCTGAGCA
AGTACGTCAAGGATCAGTCGGCCCAGATCGAGGCGTTGCTCACTTTGGAG
CAGCATTGCCACGACCACTCAGAGTTTGTCCCCGTGGCCATGAAGACCAT
ACATTTCCTTTATGAATTGGACGTGCTCTCCGAGGACTCCATCTTGAGCT
GGTTCGCCCAATCGGATCCTCTACCAGGGTTTAGCGTCGGATTCCGTCAG
AAAATCCAACCGTTCATCGACTGGCTAGAAGAGTCGGACTACGACGATGA
TGATGATGACGACTCGGAGTGA
back to top
Add to Basket