maker-scaffold111_size354240-snap-gene-2.33-mRNA-1, maker-scaffold111_size354240-snap-gene-2.33-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold111_size354240-snap-gene-2.33-mRNA-1
Unique Namemaker-scaffold111_size354240-snap-gene-2.33-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold111_size354240supercontigscaffold111_size354240:321209..325812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
synovial sarcoma associated ss18maker-scaffold111_size354240-snap-gene-2.33Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:586maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:586Tigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:587maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:587Tigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:588maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:588Tigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:589maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:exon:589Tigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:three_prime_utrmaker-scaffold111_size354240-snap-gene-2.33-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cdsmaker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cdsmaker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cds-2016676Tigriopus kingsejongensisexon
maker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cdsmaker-scaffold111_size354240-snap-gene-2.33-mRNA-1:cds-2016677Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2016678auto2016678Tigriopus kingsejongensispolypeptide
Tk11909Tk11909Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11909

>Tk11909 ID=Tk11909|Name=Tk11909|organism=Tigriopus kingsejongensis|type=polypeptide|length=564bp
MGWPQISWRSTLLPQMLDENASLIKTISEYQNAGKHTETVQYQWNLHRNL
MYLASIADSNQNLQNLLPPPGHVPPTGQGPSPHGGPPPPNGPPQGPPPPS
THPQDFNRAPNPTSAPPQRPLGQPSGYRPPGPGGYPPHGSFSNYPNTAPP
QGQQYGGQYGGPGSSPYNPPPPVSSSGESRSGYPPTSTGPPSAPVGGGPP
PVSTYNQYNQQYGGYPPSTTPSNSYPPPQGYPPQGYPPSGGGPPPPGGPG
VYPGPYPPPSASQPNSYSPVPTSQPGGPYAPSQQPPYQHPGVPPVGLGPP
SGGSLPPGPPSQSALSPQGGPPTSIPSPAPLQASVPVSATAASTHPSMGT
SQTPPITTHANAPAQSPQRPTNAASPSHRPSEAMSPHRPGSAHSQDSGMP
PCSTSANTPTTGPPAPMGSQPPPMGGAPGHPYPHGPHAPPHGPYPPPPGG
YPSGGYPGYHQGHYPYGQPGQYPPPPPQGYPPQGGQGFQYGPPPPGGSYP
SHYPGYPPSSQYGQYRPPTHGAQMGPPPPGGPPPAGYPGYDQPRGMYPGY
QGPPAPQGGPPPPT
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mRNA from alignment at scaffold111_size354240:321209..325812-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold111_size354240-snap-gene-2.33-mRNA-1 ID=maker-scaffold111_size354240-snap-gene-2.33-mRNA-1|Name=maker-scaffold111_size354240-snap-gene-2.33-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4604bp|location=Sequence derived from alignment at scaffold111_size354240:321209..325812- (Tigriopus kingsejongensis)
CCGCCCGATGGGATGGCCCCAGATTTCATGGCGTTCCACTTTGCTCCCTC
AGATGCTGGACGAGAATGCCTCGCTGATCAAGACCATCTCCGAATATCAA
AATGCGGGCAAACACACCGAGACGGTTCAGTATCAGTGGAACCTGCATCG
CAACCTCATGTACTTGGCCTCCATCGCCGACTCCAATCAGAATCTCCAAA
ACCTTCTGCCCGTAAGTCGATCATGGGGTGAATGGGGTTAGCCGGCCCCG
GCCGTACCACGCCCCAGCGGAGCCCGGGACTGGGCTCGCTCGACTGAGCC
GTGTCCGTCTGGGTCGGGTGGCCTCGTGCCGCCATCGCAAGTAGCCCACC
CGGGCCGGGCCCGGGTAGCCGAGTGTGGGGCCAGTCTGAATGGCGCTTGT
ATCGTTGCAGCCCCCCGGGCATGTCCCACCCACGGGACAAGGACCCAGTC
CGCATGGAGGTCCGCCCCCACCTAATGGGCCGCCTCAGGGACCGCCACCG
CCGAGTACCCATCCCCAGGACTTCAATCGAGCACCTAATCCCACGAGTGC
CCCACCGCAACGTAAGTGCCCACTTTAACGCTGTCCTCGGTGTGACGAAC
GAGAACGTAGCCCTTTCTCATCGGTCTCTCTCACTCTCTCTCTTCGTAAT
CATCTCCATGTTGTCGTGTACAAAACTGGGACTACTCGGTACTTCATGAA
CGTTCTCTGGCTTCTCTCTGGTGATGTAGCCTTCTCTTTTCCCACTCATC
CCTATCCACCCAACTCTCCGCCCTTGCACTCGCCCTCCTCCGGGGGTGTG
GCCAGTCCGGGGAGTGGGCCGATGTACGAAGACCCGACCCTGCCCGACGG
CTGGTTGCGCAGGGTGTCTCAGAGACAAGGCGGGGCTTCCACTGGCAAAT
GGGATGTGTATATTGTTAGGTAAATGTGCTGATTCCGTCAGCCTAGTATG
ATTATAATGCCCTGACCGATGTTTGTATGATCGATGTTGTCACTCAGCCC
TGATGGTCGGAAGTTTCGTTCACGAAATGAGTTAAGGCAATATCTGGACA
AGCACAACCTGGAGTACAATCCGGACGAGTTCGACTTCTCCATCTGGGGT
CGAGGCAATCGCACGAGTCGGAAGGAGTTACATTCTTCCAACAGTAGCAT
GCACAGTAGCACAACGGCGACCGGCTCAGCCTTATCCCCGGCTCCATCTC
TCTCGGAGGGTGAGAAATCTTTGCCCAGAAGGTCCCCATCCTTCTCAAGG
AGGGGAGCGGCCAGAATAATTTCTATCTTTCTTCCTTGGCGTGTGTAGGC
AATGTGAGCATGTACGAGCCGGATGGGGCTGGGCCAGGGGTTCCGCTCTC
TCATTTGTCGCCCCATCCCATTGGGGCCATGCCTCTCAATCCTGAGGTTA
TGGTTCCCAATGCATCGCCCTATGGGGGCCCAATGCCTCTGCTTCCACCA
CAAGGTTTGACGTCTTGTCTGAAAGCCAACCACCGACATTGCATAACCTT
GGTCCTTTCGTTTGCTTGATCTCACGCTATAAAGCCTTAGCCACTCGAGG
GATTTGCTGTCTCATTTTGAATTGTGCCCAACAAGTTCAAAGTCCACCAG
GAGGACCCTTGGGGTGGCATGGGTTGTTTGTAACGTTCCTTGATCCTCAT
TCACTTAGTAGTGCTTCCACGGCAAAAACAACATTATTCAGACGCAAATC
AAATAATGTGCAGGATAAAACACAGACCGAAACGACCTCCATCTATCAAT
CAATCCTCTCAACCACTTTTGGCATGACCTTCCTCGTCCCTGTCTCCTTT
ACTTCCCTTGAGGATAGACACGATATGGCATGAAACATCACACATCATCT
GTAGTTAGTGCTTGTTCCCCAACGTGGATAGTATGAAAATGTGGGCCCAT
GTAGGGATTGGTTAACTTGTCCGAGTCACGAGTCGAAAAAGAGTCGAGAG
GGCTCGCGAATATAGGCATTTTTCAAAGATTCTACTAATTTGTGCGAAGA
TTCGACTCTTTTGGTAATTACAAGAACATCAAGTTCGTCAAGTTTTGAGT
CAACAATTTGAGATTCTTATGATGCTTTTGATACGTTTTGAAAGCCTGTC
GCCCAGGGTTGCTGCCTGTTGTTTCAAACTGTCAGACCTCGATGCACGCG
CCCAAAACGCGGTAAAATACCTTCTACAAGCTGCAAATTAGTGCTTACTC
ATCAACCTGATGTTGGTTTTTGCCTAACTGCCGATGGGGTTTGCGAGAAA
ACGTTGAAAAATACCCTTTCGCTGTTCGGAAAGTGCAAAGCAAAGAGTCT
CTCTTTCTTCGACTCGATGACTCCCCCAACTCAAAATAGTCTATAATTTG
GACTCGCAAAAAGTCGCCAGTAAAACCCATCTTCTGCCAGACCAAGGATG
GTATGACGATCAAATCCAGTTTGTGGCGTTTTGTTGCCGATCCCATGGGA
AAGATCCCGATGTGGTCAAAATTGACGAGTGATCATCTTAGCATTAGCAT
TTGAACCTTTGGGCCTTTACACCATTTGGATTGACCTTGAAGTGTTATGC
AGTCTATATTTAACTTGGAGACAAGTTCATTTCCCAAGTCACAACAGACA
CTCATTTGGAACCACCGATCGTAGGCTCGAATCAAGGTCATTTTCTCGTA
GAAAGTAGTTTCTCAAAACATGCAACGCGACCATTCGTTTTTGAGACAAG
GTCCTTCTAAATGTTCCGTTGATTTTTCCACTGAAAATGTGGTAAAAAGT
CTTAAGGTGAGTACCTAGTAGTAGAACAGTTGTTCTTCCATTCATTGAGC
TTGATCCCAGTTTCTGTTGCATTCATGTCGTTGGCGATTACACATTTTGT
CATGCGGCTTCTGCAGTTCCTTTCAAAACGATGGAATTCCTTCTCCAGGT
CTCGATTCGTTTTTAGAAGCAGGGGGACCGTTTAAGTTTGTGAGGCACAC
ACTACGATTACCCAAGCAAAAGCAATTGGTCGATAATCTGATATTGTCAC
CTTTTCGTTTTTCAGGACCCCTTGGCCAGCCTAGCGGATATCGACCTCCG
GGACCAGGTGGTTATCCTCCTCACGGGAGTTTTTCAAACTATCCAAATAC
TGCTCCACCTCAAGGCCAACAGGTATACAAGACTGGTTGAATTTCAATAA
TTCATCTGCAGGATAAATGAGCCTGCTTGGACCAATGTTCCCAAGAAGTG
ATCGACAACCAGGGTTAATCGATGAGCCTCTTCTGCTTTTAGTATGGAGG
TCAATACGGCGGACCTGGCTCCAGCCCCTATAACCCGCCTCCTCCCGTTT
CGAGTAGTGGGGAAAGCAGGAGTGGCTATCCCCCTACCTCGACCGGCCCG
CCAAGTGCGCCCGTCGGAGGAGGTCCTCCGCCTGTGAGCACTTACAATCA
GTACAACCAACAGTATGGAGGCTATCCTCCGAGCACCACGCCATCGAATT
CCTATCCCCCACCCCAGGGATATCCTCCTCAAGGCTATCCACCGTCGGGG
GGTGGACCCCCGCCACCGGGAGGGCCAGGAGTTTATCCCGGGCCCTATCC
ACCTCCTTCAGCATCCCAGCCGAATTCATACTCGCCTGTGCCGACCAGTC
AGCCGGGTGGACCCTATGCCCCATCTCAGCAGCCCCCATACCAGCATCCT
GGTGTGCCTCCGGTTGGCCTAGGCCCACCTTCGGGCGGGTCGTTGCCTCC
AGGTCCACCGTCACAATCCGCCCTGTCGCCGCAAGGAGGCCCACCCACCT
CCATCCCCAGCCCAGCTCCCTTGCAAGCCTCTGTGCCAGTCAGTGCCACG
GCCGCTTCGACCCACCCATCAATGGGCACAAGCCAGACTCCTCCCATAAC
CACACATGCCAATGCACCCGCTCAATCTCCACAAAGACCCACAAACGCAG
CCTCGCCCTCCCACAGGCCAAGTGAGGCTATGTCGCCTCATCGACCCGGC
TCCGCTCACTCGCAAGATTCAGGCATGCCACCGTGTTCTACATCGGCGAA
CACTCCGACCACCGGTCCCCCTGCACCTATGGGCTCCCAGCCGCCTCCAA
TGGGGGGAGCCCCCGGGCATCCTTATCCCCATGGGCCACATGCCCCTCCG
CATGGCCCCTACCCACCTCCGCCCGGGGGATACCCGAGTGGCGGATATCC
TGGTTATCATCAAGGCCACTATCCTTATGGACAACCTGGTCAATATCCTC
CGCCGCCTCCTCAGGGCTATCCACCTCAAGGGGGGCAAGGCTTCCAATAT
GGTCCGCCTCCTCCTGGCGGTAGCTATCCGTCGCACTATCCAGGCTATCC
ACCGAGTAGTCAGTACGGACAATATCGCCCCCCAACCCACGGGGCTCAAA
TGGGTCCCCCACCACCTGGAGGTCCCCCGCCCGCCGGCTACCCTGGCTAT
GACCAACCCAGAGGCATGTACCCTGGATACCAAGGTCCACCTGCGCCTCA
AGGTGGCCCACCTCCGCCCACATGATGGGAGGAGCATCGTGCCTCAATGG
GATCATAATATAGATTCAACGTCAAATTGATTGGTTACAGTACTTTTGTT
ATCAACAACCACTGTAGTAATCCTGTGCTTAGATATTTGTTCGTTGTACA
TAAA
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