maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1, maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1179_size56971-snap-gene-0.19-mRNA-1
Unique Namemaker-scaffold1179_size56971-snap-gene-0.19-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1179_size56971supercontigscaffold1179_size56971:31858..32899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
zinc finger protein 420-likemaker-scaffold1179_size56971-snap-gene-0.19Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:exon:139maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:exon:139Tigriopus kingsejongensisexon
maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:exon:140maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:exon:140Tigriopus kingsejongensisexon
maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:cdsmaker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:cdsmaker-scaffold1179_size56971-snap-gene-0.19-mRNA-1:cds-1971307Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1971308auto1971308Tigriopus kingsejongensispolypeptide
Tk06637Tk06637Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06637

>Tk06637 ID=Tk06637|Name=Tk06637|organism=Tigriopus kingsejongensis|type=polypeptide|length=323bp
MAMGSTLRTTLVGLQRTIESQCPHLAGRIVHHEADADDLGLEFVTLARPF
PRRLGRRTGRLGSSTPSQQCLILPATAGIWTEWEIWTSQGTWTWQSAEPT
ERLLLRLGTLWPGSPTPEAPAPAQSEEEEESSESGADTRPISPEESQTGS
EADDDPNETVSAGLDRSQCYLCGKMMKKKSLGWHMKLVHEDERQARLSCP
HCHKTYKTQSGLVKHARIHTGERPYCCSICGKTYRDNDLWNNCQRRCSGN
YRYHCTMCRKHFNSRYRLANHQLVHSGEKPFCCPMCPYRCNRKDNLGLHV
KKKHGLDLKTAEDTSGRRCDDDN
back to top

mRNA from alignment at scaffold1179_size56971:31858..32899-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1 ID=maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1|Name=maker-scaffold1179_size56971-snap-gene-0.19-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1042bp|location=Sequence derived from alignment at scaffold1179_size56971:31858..32899- (Tigriopus kingsejongensis)
ATGGCCATGGGCTCCACACTCCGGACCACCCTGGTGGGTCTCCAGCGGAC
GATCGAATCGCAATGCCCGCATTTGGCCGGCCGCATTGTCCACCACGAGG
CGGATGCGGACGATCTGGGATTGGAGTTTGTGACACTGGCCCGACCTTTC
CCTCGACGATTGGGACGACGAACGGGGCGGCTCGGGTCCTCGACACCTTC
TCAGCAGTGTTTGATCCTACCCGCCACTGCCGGCATCTGGACCGAATGGG
AAATATGGACGAGCCAAGGGACATGGACTTGGCAGAGCGCCGAGCCCACT
GAGCGGCTTCTGCTTCGTTTGGGGACCCTCTGGCCTGGCTCGCCCACCCC
AGAGGCCCCCGCACCGGCCCAGTCGGAGGAGGAGGAGGAGTCGAGCGAGT
CCGGGGCGGACACTCGACCCATCAGCCCCGAGGAGTCCCAGACCGGGTCC
GAGGCCGATGACGACCCCAACGAGACGGTTTCAGCCGGGTTGGACCGCTC
GCAGTGCTACCTCTGCGGCAAGATGATGAAGAAAAAGTCCCTGGGCTGGC
ACATGAAGTTGGTGCACGAGGACGAGCGGCAGGCCCGACTCTCGTGCCCG
CACTGCCACAAGACGTACAAGACTCAGAGTGGCTTGGTCAAGCATGCGCG
GATCCACACGGGCGAGCGCCCCTACTGTTGCTCCATTTGCGGCAAGACCT
ATCGGGTGAGTGCGTTCATATTGGAGCTCATCCTCCAGCCTGGCCACCCG
GTGGTGATGGAACTTCGCCTTTCAGGATAACGATCTCTGGAACAATTGTC
AGCGACGGTGCAGTGGCAACTACCGCTATCACTGCACCATGTGCCGGAAA
CATTTCAACAGTCGTTATCGCCTGGCCAATCACCAATTGGTCCACAGTGG
CGAGAAGCCGTTTTGCTGCCCCATGTGCCCCTACCGGTGTAATCGCAAGG
ACAATCTGGGTCTTCATGTCAAGAAAAAGCACGGCCTGGATCTCAAAACC
GCTGAAGACACCTCCGGACGACGATGTGACGACGACAATTGA
back to top
Add to Basket