maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1, maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1209_size55568-snap-gene-0.8-mRNA-1
Unique Namemaker-scaffold1209_size55568-snap-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1209_size55568supercontigscaffold1209_size55568:150..4536 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
scavenger receptor class b member 1-likemaker-scaffold1209_size55568-snap-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:678maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:678Tigriopus kingsejongensisexon
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:679maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:679Tigriopus kingsejongensisexon
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:680maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:exon:680Tigriopus kingsejongensisexon
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:five_prime_utrmaker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:five_prime_utr-1948410Tigriopus kingsejongensisexon
maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:cdsmaker-scaffold1209_size55568-snap-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1948412auto1948412Tigriopus kingsejongensispolypeptide
Tk03740Tk03740Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03740

>Tk03740 ID=Tk03740|Name=Tk03740|organism=Tigriopus kingsejongensis|type=polypeptide|length=606bp
MSEGTQGTPKLGEESQAFITPKTKLVAPRNGCCHSKHTSRCCMATGVIGI
LFVILGIVVLLMGEGLLREKIVSSMALAEGSDRLQSWLHPPVQPHLTGYA
FHVTNPEAVLAGKKPILEERGPYVYTSTNVKDSDDNIQFHDDDTITYRLR
KLYHYVPELSGAGLDPERDFITIPNIPMWTGMNGLRSKTGIAKSIGEGLV
TSNGLGTPFINITFGGLLWGYQDELPCLKLDRPSECATGEESPFAASSGG
DDFGDDEGDDWDFKRRRKRSISEEEQSKWSKIESDPNSEWYGIAKPKAEF
VDCSCNWGLFRDRNVTMREPVRFFSGVGDLHMKGVVKEYNGKDHLGWWKP
GSVCDQAKGQDSSTLPPGITKNDKLDIFISLMCRGIVLEYEQDVNHAGIR
TLRFIPPKNALGAHDDPNPEFKNPDNECYCLEEEGFRCFKSGVLNMEPCK
RETNAPLALSMPHFYDADPYYGQMVGGLKPEKEKHQFYLDVMPEFGFPLA
IRPRFQLNILIGRYMSSTWEAIQGMQEELLVPFLWAQDGFDEPSEVMAEQ
LLFGLSAPKKVPMMGAVVCLLIGAVCLAACLGYFFWQRRTRASTKFTDEF
SLEKRP
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mRNA from alignment at scaffold1209_size55568:150..4536+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1 ID=maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1|Name=maker-scaffold1209_size55568-snap-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4387bp|location=Sequence derived from alignment at scaffold1209_size55568:150..4536+ (Tigriopus kingsejongensis)
CGATGTCGTCAGAGCGCGCCTGAACCTTCTGCGGGACTTTGGGGGAAATA
TTGCGCCCAGCCGGCGCGAGAGTTGTTCGTAGTTCTTCTGCAGCGTGAAC
GACTTCAAAGCCGATTGTCTCCCAAGAAGGGTCAGAACTCTTTGGAAGAA
GTGAGTATAAGCCGGCCAGCAATTGGGGGAGCCCCACGTTGACGGCCAAG
ATCGGAAGGGATTGTTCGCGTTTGGGATTCCGGTGGAGTGGGGAGTCTTT
TTTTTGGAAGAAATCCAACACTTTTACCCTAAGACACGATTGCGTGAGCT
AGCTAACTTCCATGGGGTTATTAATGCGAGTAGTGCACGAAGATTAGAGA
CACTTGATATCTGCTTAGTTTCAACGATTCACTTGGTGCTTGGAAAAAGT
GCAATTGATTGGCCTTGGCCAAGACCAAAGTCCAAGCCGCGTCTGGGCCC
TTAAACAAACGCTTGACAGTTTCACGTGATTGGACCACTTAGCGGACTAG
CTCTCACTCCGTCCAGGATTTGGCCCAATCAAGTGTTGAAGTCAATCCGG
TAGACATCCTCCTCCTGTTCTCAGGAAAAACGATCCATCTTCAAGGGAGT
TTGGGATTTTTTTGGCTCCTTGATAAGCCTGACACGAATTGGTAGTCAGA
AGCGCAACTTGTCACTCGCCGCTCAGTTTTATCTTGTTTGCCCACGGCAT
TAATTGATCAACCCTAGATCAGCTTGCTCATTAGCCGCTCTCCTCACTTC
CTCCAAAGCTAATCGGAGCCCATAATGAGCGAGGGGACCCAAGGGACGCC
CAAACTGGGCGAAGAGTCACAAGCATTCATCACCCCCAAGACCAAGCTCG
TGGCTCCGCGCAATGGGTGTTGCCACTCCAAACACACTTCCCGGTGTTGC
ATGGCCACGGGTGTGATTGGCATACTCTTCGTGATCTTGGGCATTGTGGT
CCTACTCATGGGTGAGGGTCTTCTCCGTGAGAAGATTGTCTCCTCCATGG
CCCTCGCCGAAGGGAGTGACCGCTTACAGTCCTGGCTCCATCCCCCCGTG
CAGCCGCATCTGACCGGCTACGCCTTCCATGTGACCAATCCCGAGGCTGT
TCTCGCCGGGAAGAAGCCCATCCTGGAGGAGAGAGGTCCCTACGTGTACA
CCTCCACCAATGTGAAGGATTCGGACGACAACATCCAGTTCCACGATGAC
GACACCATCACCTATCGACTGCGCAAGCTCTACCACTACGTGCCCGAGCT
CAGTGGAGCGGGTTTGGATCCCGAGCGGGACTTCATCACCATTCCCAATA
TCCCCATGTGGACTGGAATGAATGGACTCCGAAGCAAAACGGGAATAGCC
AAAAGTATTGGCGAGGGACTCGTCACGAGCAATGGTCTTGGCACTCCGTT
CATCAACATCACTTTCGGGGGTCTCCTCTGGGGCTATCAGGACGAGCTGC
CTTGTCTCAAGCTCGATCGACCCTCTGAGTGTGCCACGGGCGAGGAGAGT
CCCTTCGCCGCCTCATCAGGCGGGGATGACTTTGGGGATGATGAAGGCGA
TGACTGGGACTTCAAACGCAGGCGTAAGCGCTCCATTAGTGAGGAAGAGC
AGAGCAAATGGTCCAAGATCGAGAGTGATCCCAACTCCGAGTGGTACGGC
ATTGCCAAGCCCAAGGCCGAGTTTGTCGACTGCTCCTGCAATTGGGGACT
GTTCCGGGACCGAAATGTGACCATGCGCGAGCCGGTCCGCTTCTTCTCGG
GCGTCGGAGATCTGCACATGAAGGGTGTGGTCAAGGAGTACAATGGAAAA
GACCACTTGGGATGGTGGAAACCCGGATCCGTCTGTGATCAGGCCAAGGG
CCAGGACAGCTCCACCCTGCCGCCTGGGATCACCAAGAATGACAAGCTGG
ACATCTTCATCTCGCTCATGTGCCGTGGAATCGTGCTCGAGTATGAACAG
GTAAGGCAGACCCGCATAGAAGGACTAAGGTCAGTCGTCTGCTAACGACA
ATGATTGCAAGTTGTATTATCTCCCTAAGTCCTCGCCAGCAATGACTGGC
CCAGGACCAGACCAGTTCTTCACTCTATACTAGTTATCTTTGAAGGGGAG
GAAAAACCCGGGTGATCCAATTACTCTCGTCAATGTTCTTTTTGAACTTG
GGTGAAATTTCTTGGATAAGAGACCGAGCTTAAGAGCTTTGAGCATTCCC
AAAATAAGATGTTAAATGTCCCTTTCCTAGTCGAAAGGGGTCAGAGATTC
TCCCCAATCTTTCCATTTGTTTGAACGTCGCTCAAAATTGGCTACATGAT
CCGAGAATATTGCGTACTTGGCGAGCTCCAAGTCGGAAAGACGTCAGCAA
GGCCGTTTCAGTTAGTGTCAAAAGATTTCCTGGATTTTGAGCGAAACAAG
CTCTGAGATAAATATACGCTCAGAAGTTGTCATGCATGTGTATGTATTTA
AAAGGAAAATGTCCTTGGATTGGGGGGGGGGGGAAGGCATTCCCAATAAT
CGATACTGTTGTGTTGCATAGCACTTAATAGCCCCAGTGGCTTGATTGAT
TGAATAGTAGCACAACAACACTATTCCTATTCCAAGCCGGTTCTCGGATA
TTTTAAGGCAAGTGGTCACATGTTCGGTTGGCAAAGTCCGGACAGCTATG
ACCCCAATTCCTTGCCAAAAGCCGCCATTGGCCGAAAGTTATGCCTTGAC
CGTGAGAGGCGAAAGCTGTTGACAATGCAGCTCTCCAATTCCCTGGTCCG
GCCATGTTTGAGGGGCGAAAGCAGTTGAATCTTCTGTTACAGCTCATCTG
CATGTTTTATTAATCCGCACACTCGGGGCCAAATGCTGCATGAATGAATT
CAATATCTGTTGCGACCCTAGCACATGTGGCATGAATCCTTTGTAATATC
AATTTGACTGACTAATGAGACCGCCTCACACCCGAGGCAAGAGATCAATG
AATGTACTAGTTCATAATTGGGACCAACTTCACCCGATAGAAAGCTCACA
TGTCCCACTTTCGAACCCAGCACAGGCTGTCCTTGAACTTCTGCAACACT
GTTGCAACTCAATTTTCCTCTTGACTGAGAAACTTGCAGCTTGTCCCACA
AACAGGCTCACCGTGCGAGACCCATTGAAATCTCAAACAAATTGCCCACA
GTCAATGAAGAAGAACACACTACAGTATAGCTGTGTTCACCACCCATTGG
GCTGAATCCATTTCGATGTGTTCGTTAACTTCTAAACAGGCATTCAGATT
GGACATGCTCTGCTTTTCTAGGACGTCAACCATGCCGGAATTCGAACCTT
GAGGTTCATTCCCCCCAAGAATGCCCTGGGAGCTCACGACGATCCCAATC
CCGAGTTCAAGAACCCGGACAACGAATGCTATTGCCTGGAGGAGGAGGGC
TTCAGGTGCTTCAAGTCCGGCGTGCTCAACATGGAGCCCTGCAAGCGGGA
AACGAACGCCCCACTGGCCTTGTCCATGCCGCATTTCTACGATGCCGACC
CGTATTACGGTCAAATGGTGGGGGGTCTCAAGCCCGAGAAGGAGAAGCAT
CAGTTCTACCTGGATGTGATGCCCGAGTTCGGCTTCCCCTTGGCCATTCG
CCCGCGTTTCCAGCTCAACATCCTGATCGGCCGCTACATGTCCAGCACCT
GGGAGGCCATCCAAGGCATGCAGGAGGAGCTTCTCGTGCCCTTCTTGTGG
GCCCAAGACGGCTTCGATGAGCCCTCGGAGGTGATGGCCGAACAGCTCTT
GTTCGGCTTGTCGGCCCCCAAGAAAGTGCCCATGATGGGGGCAGTCGTGT
GCCTCCTGATCGGAGCCGTGTGCCTCGCAGCCTGTCTGGGCTACTTCTTT
TGGCAGCGAAGGACCCGAGCTTCGACCAAGTTTACGGATGAGTTCAGTTT
GGAGAAGCGACCCTAGGCAGGCCAATGGATTCAATGCTTTGGCTGTGAGA
GGACTCGAGAATCCCCCTAGTCCTGTCCGCTTAGGAGTTTTTTTCATTGG
AAAAGGCGAACGAGAAGAGGTTGTTCTCCTCCTTTGGCTCCTTTGGAGAT
TTCACCCCCTCAAAAGTGGCATTATTATCCAATTTGGGACGTCAAAGGCG
ACCCGATTATGTACATATCCGACTCCATTATCTGGGAGTCTCGAACAACG
ACTGAAGAAGTGGAGAATGAGGAACTCAAGCCAAGAAATGAGGCGAGATA
ACTCTGCTGAATTGTCCTGCCACATCATTGCCCAAGAATGTTCAATTGTC
GCAATTCTGTGTTCATCTTTTAGCCCAATCTATCACTCCCATTTTTATTC
ATATCCGTTGCTCGCCAACCACGCGTTTAGTCACTCGGTAATCTTTAATG
TGATGTCACCCTCCACCAATAAACCATCTTTTGTCGA
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