maker-scaffold141_size315519-snap-gene-0.13-mRNA-1, maker-scaffold141_size315519-snap-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold141_size315519-snap-gene-0.13-mRNA-1
Unique Namemaker-scaffold141_size315519-snap-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold141_size315519supercontigscaffold141_size315519:77536..79466 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
heterogeneous nuclear ribonucleoprotein 27c-like isoform x3maker-scaffold141_size315519-snap-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:107maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:107Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:108maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:108Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:109maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:109Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:110maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:exon:110Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cdsmaker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cdsmaker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cds-1988014Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cdsmaker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cds-1988015Tigriopus kingsejongensisexon
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cdsmaker-scaffold141_size315519-snap-gene-0.13-mRNA-1:cds-1988016Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1988017auto1988017Tigriopus kingsejongensispolypeptide
Tk03982Tk03982Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03982

>Tk03982 ID=Tk03982|Name=Tk03982|organism=Tigriopus kingsejongensis|type=polypeptide|length=463bp
MTVSASGLDVRAGAVDLTTLCLLLRSNLMAQHHPHLVHPNGMVGPPPPGA
LHPRIQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVM
KNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQK
PKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKS
RGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQ
SVDQWGMPPQASPTPNGHAAPAPAGFSGWGAPPGAPPAPATAYPAQYTSP
QPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQ
APTTPQPAPPSAPPPHHSYWSSPGHPQPPPPTHDPYGPKPAEYHHSPYAQ
PQQQQPHSYPFAPQQPKMPQPGQAYHPQPGSGHPEFYPHATSPPGPYGTQ
PPTDLTASLGPQR
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mRNA from alignment at scaffold141_size315519:77536..79466+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold141_size315519-snap-gene-0.13-mRNA-1 ID=maker-scaffold141_size315519-snap-gene-0.13-mRNA-1|Name=maker-scaffold141_size315519-snap-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1931bp|location=Sequence derived from alignment at scaffold141_size315519:77536..79466+ (Tigriopus kingsejongensis)
ATGACCGTGTCAGCTTCGGGGCTGGACGTCCGAGCTGGGGCCGTTGATTT
GACTACTCTCTGCTTACTTTTAAGGTGTTCTAACCCGACAGACTGCGGAT
CGCCTCACAACTACTACTACTACTACTACTACTACTACTACTACTTCTAA
GTTACTACATTGATGGCTTACTTCTATTCTAAGGGCTTAGAATAAGGCAT
AACACAGTATTGATCGTATCGCTCGAGTGGTAAGTGTTCATGCCGAGCCG
GCCGTCGCTCGGGTTCGTGCGCGCGTTGGAGCGTCAGGCCGAGTCCGGGT
CCTAGTTTTAATCCGTTCGCTACTCCCCGCCTCACCCCTAGCCCGACTCG
CTAACCTCGTCTTTGTCCCACCAGATCGAATCTCATGGCCCAACACCACC
CGCATCTCGTCCACCCCAATGGGATGGTGGGTCCCCCGCCGCCTGGCGCG
CTCCACCCCCGGATCCAGGGCAAGAAACACCGTCATGAGGATGAGGAGCA
AGGCAAGCTCTTTGTGGGCGGTCTCAGGTGAGTGTAGCCACGTGGAATTC
CTCCGGTGCCCTGGAATTGGTCTAATTGCCTGGTTTAATCGCGTAGTTGG
GATACGGCCCAAGAGAGCTTGTTGGCCTACTTTGGCCAGTTCGGCGAAGT
GATCGATTGCGTGGTCATGAAGAACTTGGAAAGCGGTCGCTCGCGCGGAT
TTGGGTTCGTGACCTTCGCGGATCCAGCCAATATCGACGCGGTTCTGGCC
AGCAGTCCTCATCATCTGGATGGGCGGACCATCGACCCCAAAGCGTGTAA
TCCGCGTAGCATGCAGAAGCCAAAGAAGTCCAATGTCCAATATTTTCCCA
AGGTAAAATATCCGGCTATCCGCCCTGAACCTAGCTGGGCAGTCTGAAAT
CGATTGCGGAAAGCTAGGCCAGCCGTGGGGCGGACGGAGCTAGTACAGTC
CGACTCGGCCACCGTCTGGGCTTGATCGCTAATTGGCCAGCTTCTCTCTC
TCTCTCTCTCTCGCTCTTGACGTAGGTGTTTCTCGGCGGACTCCCGCCCA
ATATCACGGAAACGGACCTGCGGAGCTTCTTCAGCCACTATGGGGAGGTG
ATCGAGGTGGTGATCATGTACGATCAGGAGAAGAAAAAGAGTCGCGGTTT
CGGCTTTCTGAGCTTCGCCGACGACGTGGCCTGTTCCAAGGCTGTCAGTG
AGCATTATGTCATGATCAAAGACAAGCAGGTCGAAGTCAAGCGAGCCGAG
CCTAGGACCAACCCGGTCAGTCACAATGGGACCAAGATGCAATCCGTAGA
TCAATGGGGGATGCCACCTCAGGCTAGTCCCACCCCCAATGGGCATGCAG
CACCCGCGCCCGCCGGGTTTTCGGGCTGGGGGGCACCCCCAGGGGCTCCA
CCGGCGCCGGCCACGGCTTATCCCGCTCAATACACCAGCCCACAGCCCCC
GACTCACGCCCATCATTGGGGCCCGGGGCCACCTCAGCATGGAGCCCCAC
CCCAATGGGCGCCCCATCAGACCCATTACGCTCCACCGGCGAGCGCACCA
CCTTCCCACGTCCCACATCAGCCGGGATATCCCGTGTATCAGGCTCCCAC
CACACCTCAACCGGCGCCCCCCAGTGCCCCGCCGCCCCACCACAGCTACT
GGTCCAGCCCGGGACACCCCCAGCCCCCGCCCCCTACCCATGATCCCTAC
GGCCCCAAGCCGGCGGAATACCACCACTCCCCGTATGCTCAGCCACAGCA
GCAGCAGCCCCACTCCTACCCTTTTGCGCCACAGCAACCCAAGATGCCGC
AGCCTGGACAGGCCTATCATCCCCAGCCTGGCTCGGGCCATCCGGAGTTC
TACCCTCACGCAACGAGTCCTCCGGGTCCCTACGGCACGCAGCCCCCCAC
TGACCTCACTGCCAGTCTCGGGCCTCAGCGA
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