Tk03982, Tk03982 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03982
Unique NameTk03982
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length463
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 69..141
e-value: 3.2E-22
score: 89.8
coord: 161..233
e-value: 6.0E-23
score: 92.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 70..128
e-value: 8.6E-15
score: 54.2
coord: 162..220
e-value: 8.2E-16
score: 57.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 68..155
score: 16.466
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 160..237
score: 17.251
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 54..155
e-value: 1.8E-23
score: 84.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 160..239
e-value: 6.0E-23
score: 83.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..261
NoneNo IPR availablePANTHERPTHR44847FAMILY NOT NAMEDcoord: 62..432
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 161..256
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 66..152

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1maker-scaffold141_size315519-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03982 ID=Tk03982|Name=Tk03982|organism=Tigriopus kingsejongensis|type=polypeptide|length=463bp
MTVSASGLDVRAGAVDLTTLCLLLRSNLMAQHHPHLVHPNGMVGPPPPGA
LHPRIQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVM
KNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQK
PKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKS
RGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQ
SVDQWGMPPQASPTPNGHAAPAPAGFSGWGAPPGAPPAPATAYPAQYTSP
QPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQ
APTTPQPAPPSAPPPHHSYWSSPGHPQPPPPTHDPYGPKPAEYHHSPYAQ
PQQQQPHSYPFAPQQPKMPQPGQAYHPQPGSGHPEFYPHATSPPGPYGTQ
PPTDLTASLGPQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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