maker-scaffold14_size734282-snap-gene-3.14-mRNA-1, maker-scaffold14_size734282-snap-gene-3.14-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1
Unique Name	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold14_size734282	supercontig	scaffold14_size734282:319599..326839 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
protein nlrc3-like	maker-scaffold14_size734282-snap-gene-3.14	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:380	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:380	Tigriopus kingsejongensis	exon
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:381	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:381	Tigriopus kingsejongensis	exon
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:382	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:exon:382	Tigriopus kingsejongensis	exon
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:five_prime_utr	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:five_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:five_prime_utr	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:five_prime_utr-2016650	Tigriopus kingsejongensis	exon
maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:cds	maker-scaffold14_size734282-snap-gene-3.14-mRNA-1:cds	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2016652	auto2016652	Tigriopus kingsejongensis	polypeptide
Tk11296	Tk11296	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold14_size734282:319599..326839+

protein sequence of Tk11296

>Tk11296 ID=Tk11296|Name=Tk11296|organism=Tigriopus kingsejongensis|type=polypeptide|length=206bp
MTIRAPAAPSGETATLAPEPTTDIGARTNNFNSNPGSEAMSRSGTFQEAA
KPLGLKAGAAAWISSEDLLTDGSSTDGCREDLSQLKEQMQNFSPRAPKGM
QGQWPEINITEDGQAIGSSQHHQVEVVDDGLSAARANSTSLHQNHHLQSI
TQSDKSEAAVEHVFEAESICWKPKRGSSFKAHQDLARRVLENESLIERSQ
EDEKKL

mRNA from alignment at scaffold14_size734282:319599..326839+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold14_size734282-snap-gene-3.14-mRNA-1 ID=maker-scaffold14_size734282-snap-gene-3.14-mRNA-1|Name=maker-scaffold14_size734282-snap-gene-3.14-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7241bp|location=Sequence derived from alignment at scaffold14_size734282:319599..326839+ (Tigriopus kingsejongensis)
AGAACGATGATCCGGAGGAGTTCTCTGGTTTTGGGAGTGGTGGAGCCGAA
GGAGGAGAAAGAATGCGTAGGGCTTGGCCTCGTTGAAGACGAATCCCGTG
CTCGGAGAGCTTGATCCTGCCGTGAGACACTGGATATTACTACTTCATTC
ATCAGTGGCACACTACTTAGAGGCAATGAATGACCTCGAATGGGAGAGTG
CAAGTACCTAGGGGGGCCGGAAATCAATTCATGCTGGTGTGGCCTCATGG
GTGATGGTTGGATGGAGAGAGGGTTTCAGTGCAACAGAATTAAGTGCCAC
AAACTGTCGAGGCCAAGTGCAAATATGGAAATTCCAGGGATTGTTCCAGC
TAACACATGCACGAACCACGAAAATTTTGTCATGTCCTCGAAAGTGGATG
GAAGAATTTCCTATTTGCATTTCTTAACGACAGTTCTCTTTTCAAAGGCA
AATTGAAACATGTGGGGTGAATAGAAAACCCAACCCAAATACACTCTCAA
AGGCGTCTGTCGAGGAGATTTTTCCTTCGGTCTGGAACCAATGGGCTCTT
GAGTATTTCAAAGATATGATTATCCATCCAGCTTATTGCACGACATAGCG
AGCCAGGCCCGAATAATTGGCCAATTACAATCCCTGGATTCGGACTCAAG
GTTTCCTTTGATTCAAGATCAATAGCTCAAATAGATTTCCAAAACAAGCT
GCGTTGCCAAACTCCAATTGGAACAGTTGGGTCCAGGAAAGATACAAAAT
AATCCTATGCTTGGTAAATTGCACAGTGTCTGTGTGTTAAGTTCTGAGCT
GGAAAAACTGTGGCTAATCATGGTACAAAACATGTGTATTTTTTGCTTTC
ACCTTACAAGTCGATTGGTCATGTGATCGTGATAGGTCATTAACCTGACC
TAACCAGGGTTGTCAGACAATTAGGGACTCGTCTGGCCATTATTGGACAA
CCTTACCGTACACATCCCTGATAGCCTGAGTAAGAACTCAGAACCATGAA
CCATTGTATTTTAGCGTAACTCTTTGAGTGCCACACAAATGAAAAATCTT
GCATCTTGTTTTCAGAAGGGATTCAAGTTTGGACGCTTGAATGGTTTCCA
AGGTTTCGAATTTCTGTTCAGAGGTCTTGGAACATTTGTAATTTTGCAAC
TTGCGTTCCAGGCTGGGGCATTAATTAATGAAGCCATTTCTTAGTCAGTT
AGCCCTCTTGGCCTTGTTACGCTAACATGCTATGCAGCAGTAAGTAGTTT
ATTTACCTGCAACTCGAAAAATGCGCACATTTTCCCTCCAAAGACAACAT
TTATTGGAAGAGATTGTGTCTTGGCCACCTTAATCCTTTGAACAAATATT
TTTATTATGATCCTAATTGACCACCAATTCCTAATTGTTGAAGCAAGCCG
CGTAGAGCAGTGGTAGAGTGTCACAATCAGTCCTCTATCGCTGCGTTATT
CGAAGGTCGTTGGTTCGATCCCCGGGCTTGCCAAGTTCCAGTTGTTAAAG
TATGTTAAGTCACAGCTATTGTTTGCTTCCCTTGCGGGATTAAAGTGGGC
GTACTTGTACTGTAGTCATTCCTCGAGGGTCAGATAATATCTCATATTAA
ATTTGCCTAGCAGGCAATAGAGATTCCTTGGCTGGGCAGAAATGCCTGGT
CCTTCTGATAAAAACAAACAAACAAAATCCTAATTGATGAGTAAACACTA
AATTGACTTCCATACATATAATACTTAAATATAATGATTTGGACAGTAGG
TGTCATGATGTTCGCCCTGAGGACCTCTGACGCTCATGCTCTCCTCGTTC
CTATATATCAAAGATATAACTATGATTCTCAATAAAGTATTCAGTAGTCA
CATTTTGTCCAGGCAGCAGTCTCGAATCCACTTTGGTCCACTTCGGTTTA
CCACAATAAACTTAGAGTAGTTACATATGAATTACACAAGATTGCAAACT
CTCTAAAATGGAAGGCAAGCCCGCTTTTTTTGGCTCGATCATCCAGTTTT
GAGCCAATTTTTCACGCTTTGCGTTTAATTTTGATCCAACATTGCCCACT
GTGTCCCTCAAGGAAAGTGCCACTCTCGGGAAGAGTTCGCTCGGTGACAT
TTTAGTGGCACTTGAGTGACATTTTGGCACCCTAATTATTTCACTAAAAT
GTCGATGGCGGACGCTGCTCCAAACAAATGTTGGCTAAAAAAGTCAATTT
CGGCACTAAACTTTTTTACAACGAATTCGGGCAACTCATTGTGGGTTAGA
CTAATCAAAGAATGCTGGATGAATTAGAATGGGAATGCAGCTTGTTTTAC
CCCTAGTTTAGGTCAGAAATGGCGTAACTTCTCCGAAAAGCCACGACACC
CTGCTTATCTGGAAGTATTACTCACAATTGGACATTGCCAGACTTACGGG
GCCAAACTCAAAAGTGAGCAAATTTTCAGAATGGAAATCCAGCATTAAGA
AGCTGGAGCTGTTCGAAGTTTCCAATAACGATAAACGAATGCCAGATAAT
ATTGCTGACTTTGGGCACTCTGAGAAGCTCTCAGCGATGTCAGGCTGGCC
ATGGTCAACCCATTAATGCTGCATTAATCGTGGTGATCTACTTTGACAAC
TAACATTGAGCTAAATGCATCTGGATTTCCGATTTGAAAATCTGGTCACT
TTTGACGTTGGCCCAAAGTCTGGCCAGCGTAATTCTTTCATGTGTACAGG
GTTCCATGGATAGGCCAACTGGTAGCTACGTCTTTTGGGGCCGAAAATAG
CACGAAAACAAGCTACCTTCCCATTCCAATAGATCCACCTTTCCTTGGAC
TAATGAGCTGTTCTTCTACCAGATTAAAAGAAGGGGTACTTGAGTGTACA
TATATGAACGTTGTCTTATTCCAGATTGAGCTTGAAATGCGAGCATTTCC
TTGAAGACAGCCGGAGAATTAGGCCAGAAACTGATGGGGCGAGGCATTCA
CTGTTCCCGTCCTTAATGCCGATTTAGTGCCCTAAAATAAGCCTGGTCGT
GCCTCGTCTCAAGGCGGACATTTACTCTTCAAGACTTACCTTCCTCGACC
CTCACGACTTATTGGAAGTGTTCGGAGGCTTTGGCAGTGTGCTAAATCCT
CGTCCCACCAATGACAATTCGAGCCCCAGCTGCTCCGAGTGGCGAGACAG
CGACCTTGGCTCCAGAGCCGACAACAGACATAGGGGCTCGGACCAATAAC
TTCAATTCAAATCCCGGCTCAGAGGCCATGAGCAGGTCTGGGACGTTCCA
GGAGGCGGCCAAGCCTTTGGGGTTGAAAGCTGGGGCAGCTGCCTGGATCT
CCTCCGAAGATCTCCTCACCGACGGAAGTAGCACCGATGGCTGTCGAGAG
GACTTGAGCCAGCTCAAGGAACAGATGCAGAACTTTTCCCCTCGAGCTCC
TAAGGGAATGCAAGGGCAATGGCCCGAGATCAACATTACCGAGGATGGAC
AGGCAATTGGCTCGTCCCAACACCACCAGGTCGAGGTAAGGGGATGATTG
CATGCGTGTTTAGGGACCAAAACATGGATGACAGATTGGTCCCACATTGG
CCCCCCTAGTGGAACTTGGGCATAACTTGGCAGAGACACGCCTGGCCTGT
TTCGTGCCTGGAAGGCCAGAGAAAGCCCAAGCCAGGGCACTCGCATTTAA
ACTTACTCAATGCCATACAAGAACTGTTTGTTTGTCCAGGAAGCACCTGC
TTCCAAGTCAGACTTGTCTGACGTCCAACGTTTCAAAGCATCTTTTTTCT
CCCTGACCTCGACCAGCTTGAGAATATTAGCCCTATTTAAGGCTCCAAAT
GTGATTTAATACCTTACAAGTGCCCCTTCAGATCCTATCAAGGGCATCGT
TAGGAGCTTCAACGACCAGTAGCGATGTCGCTCCTAAATCAAAGTCCCCG
TGGGTGGTCGAAATTGAACTTTTAATGCAGTTTAACTGTTTTACAGGATT
TCCCATTTGCCATTATTTCAGCTCAACAATAGTAACAAAAATCAAGAATA
ATGTATCGGAACTAGTCTGATTACGTCCAGCCTGACGATGCCAAGGTCTT
GACAGGATGATTAGAATTAACAATAGTATGTAGGATTAATTTTCTGTATT
CCTTTCCTTTGACCAGCTTCAGCTTATTAAGGCTACAGTTTCATTGTCAG
AAACTCATGAGTAAGCAGGCCAAAAAAAACTTTGGAAGTAAGGCCAAAAT
ATTGAATATTTATCTTGATGAAAAGTACCGAAATACTGAAAAAATGTTGT
AGTGAAAACGGCTTAATTTGGTCGCTTATTTCAGAAAAAAACATATGTTT
CCTTGCTTTTTATTTCGTTTATTTTTACTTAGAAAAATATTTCAAAGTTT
GCCACCATTTGTTTGGAGGTTCCACAAGTTACGAAGTTAGGGAGCTTTTA
CGAAGTTACAAAAAAAGGTTGGGAATAGTCCAATGGCAAATACTCAAATA
TTTAAGCGACATGAAAAATATGTCGATTTTGGGAATTGATAGCAGGTTCT
TGTCCCAAAGTACTACATTTTCGTTTTAAATTTACCAGCTGAGGCTTTTT
AGCAATTCAGACTAATTTTTTATCCATATTGCAAGTATTGGAAGTAAAGA
TTAGACGATTTTCCGAAAAAAGGTCAAAATATTTAAAATTTCCTGAAAAA
GCCCAAAATATTTAATTTATCCCGAAACGGAAAAATATGGATTTTTTAGC
GTTTAAACCTTTCTTCTTTTAATTATAGTTATTATATGGACCCTGTTTCC
GGAAAAAACCTGGATAGTTGTTTCTTTGAGTCAGCTGAATTGAGAGCGGT
GCTGAAGAAAGTTATGAAATACTGTGAAACAAGTTTAGCTTCGAAGCAAA
GCACACGCTTTACCATTTCTTTGCATTTGTGTGTGTCTAATCTCCAAATG
CAAAGACACTTATATTTTCAAACATAATTTTTAAAAGACTCTTAAAAGTC
TGGAAGAAATCATACCAATGAAATTTTGAATTTTTTCACATTTTTACACC
CATCAATTGCTAAATGGCATTTGTTCGGCCTTTTTTGTCGGTTTGAATGG
CCCCAGAGGGATATCGTGAAATATCATTGGCAAATTGACTTGGCTTCACA
AACATGGTCAGCCATGTGACTTCTTAAGCATTTTCGCTATCCTTGGGAAG
ATGTTCAACACTTGTGTAACGAAAAGGTGCTTTGAGTTTTTTTGCCCAAA
ATCACAGGTGGCGTTTTCGATTATCCCAACGTTTTCCGCCCCCCGTAATA
ACACACTTTAGCCCATCAAAAAACAACCGTAAAACTTTGTCAGTCCAAAC
GATAAAAAAATGGCTTGGCCCAGATCTAAGGTGTTAATGATATGCCGAAG
TTAAGCAACATTTGCTTTCCAGTAGTTGGTTCAATTTCGCTCGTTTTTCC
GAAAAATCCATCACTTGGATCCAGTTAAAGCGATCTAATTTTTCAGCTGA
CCTATCAATTTCGTCCAGATGGCTCAAAAAACTTATCACACGTTCCACTT
TGTTCCACACCATGGCCATGAGCTTACAGGGAATGTGGTGACCTCGAAAC
TTGGGAACATTATCGATGGTCAAAATACTCGCTTGACGGATGTCGGATGC
TTTAGCAAAAAGTCTTAACTTGATTACAGATTGCGAACGCTGCCTTATCA
AATGATTTAAAAAGGAATCCAGTCCGTGGAAAATCGTAGTCCCACTCTCT
CAATAGCCAAGGGGAGCACGAAATTTATCGGAACACTAAACAAGTCAACC
GAATGTTCTCGTGACATCCGTTCTATCCTAACAAAAAAGGGCACTGACTG
CCCAAAGTTGGGAGCTTCCCGTGTTTTAAGGTGACTATCTGGGGTCTCTG
ATCCTCTTTTCTCAGATAAATGCTACCATGTCGATTTGAAGTGGCTTGGC
TGTAAAGGGCACCACCATCTTCTCCGTTTGAAAAGCCATTGAATTTTCCT
AAAGGTCATTTCAGGCCATTTAAATCAACTACTTTCCATAGGCGATTGAA
CGCAGCTGTAAACAGCTTTGCTCCCCTTCAAGCTGAACTGTTGAGTGTAT
GCCATAAAGTAGATAGAGAAGAAGTGCAATAAGGGATGGCATATTCAGCT
GATCTGCCCAAGCTCGAACAACTGTTTTGAAATTACTCAACCCTGCGTCT
CTAAGAGAGTTGCGCCAATGTACAGCCTGCGTGGCCCGAGCAGATACCAT
TTACTACATAATGCTCCTCCAACGGGGCGCGCTTTTTTTCTGGTCCAGGA
AAGAACACGTTTATGTTTTAAAACATGGAATATTGCTTCTGGTGTGAATT
ATTTTGAACATGAGGTGTAGAAAAATGACCCATTTGGGTTGGGCCTCATG
TCGGGAACTCATGGCTTACTCATCGGGGAAAAGAAATACCTGAAAAGAAA
TACCATGTTGATCATGGAATAACAAAGACTTATCTCAGTACGTAATGATT
TGTTGTTTTGGGACAGAATCGAGCTTGGCCGGAGGTTGTCGTAAATCTCC
TGAACGGCGCATATTAAACCCTGCGCGACCTAGGCTTAGGGCTCACCATT
TGAGGGTTTCCCTTAAATTCAGGTCCGCTTCCAACCATCCAACAGGGTGA
CGAGTTTACATACTGTACATGTGGCAATTATTTGTTTGCTTTGCTTGATG
TAAGGAAGTATGTAACAAAGGATAACTTAGTTGCATTCAAATGAGAAAAA
CAGATGGATACCTCTTGGTCACACTGAAAACTTCGTTTGTGAGGAGAACT
TGCGCACTAAGCCGGATATGCCACTCATGCGTATTAATGTCCACTCTATT
TTCCCTATGGTCGAAACCAAATCAATGGAAGCAATCCTAATCAATTGGAC
CATCTCGAGCGTAGGCATTTGAGTGAAAGAAAAGTTTCTCCATTCGAGTG
CTCCCCAATTCCAAACATCAAGATCCTTGAATGTGTTTTGAAAGCCGACA
CAAAGGAGCGATTTGGAGCCAGCCATTCACCCATGTTTTGTCTTTCAGGT
TGTAGATGATGGATTAAGTGCGGCCAGAGCTAACAGCACCTCCCTGCACC
AAAATCACCACCTCCAGTCAATAACTCAATCTGATAAATCTGAAGCCGCC
GTGGAGCATGTTTTCGAGGCCGAATCCATTTGTTGGAAGCCCAAGCGAGG
ATCCTCATTCAAGGCCCATCAGGATTTGGCTAGACGAGTTTTGGAGAACG
AGTCCTTGATTGAGCGATCGCAAGAAGATGAAAAGAAACTT

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