maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1, maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1
Unique Namemaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1506_size38115supercontigscaffold1506_size38115:31862..34765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
lim domain-binding protein 3maker-scaffold1506_size38115-snap-gene-0.6Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:242maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:242Tigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:243maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:243Tigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:244maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:244Tigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:245maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:exon:245Tigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:five_prime_utrmaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cds-1971258Tigriopus kingsejongensisexon
maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cdsmaker-scaffold1506_size38115-snap-gene-0.6-mRNA-1:cds-1971259Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1971260auto1971260Tigriopus kingsejongensispolypeptide
Tk07866Tk07866Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07866

>Tk07866 ID=Tk07866|Name=Tk07866|organism=Tigriopus kingsejongensis|type=polypeptide|length=121bp
LPIILPTVWRLKPRSSNTLKAMNKTFCPECFVCAYCGKIFANSPFYLEDG
LPYCEYDWNELFTTKCVSCGFPIEAGDRWVEALNNNYHSQCFNCTLCKKN
LEGVGFFVKSGRAFCKSHARG
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mRNA from alignment at scaffold1506_size38115:31862..34765+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1 ID=maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1|Name=maker-scaffold1506_size38115-snap-gene-0.6-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2904bp|location=Sequence derived from alignment at scaffold1506_size38115:31862..34765+ (Tigriopus kingsejongensis)
GGCCTCGGTTGGAGCTCGCAAGCTCCGTCCGAGGCCCAAAAATACATCAC
CAAGCATCTAGTTTCTAAGAAAATATAGCTTTTGCTCTACACTTTCGATT
TGGCCAAATGTTGAAAGTGTGAGGCAAAGGCGACCCTCAAGTGAATGCTG
TTTCGTGTCTTCCGGTGCATTGCCCATCATTTTGCCCACTGTCTGGCGTC
TCAAGCCACGTTCATCGGTAAGAATACGTTATTTTCCGTCTATTTTCCCT
GCGTGTTTGAGGAAATGGTGAGCTCAATATTAAAAAAGGCCGCACGCCGC
CTACGGCATGGACCAAAGTGACCTTTGATTCGTTGAGGAAGTGGCCTTGC
CCATCAAATAGCGCCTGGGAAATGATCCATGTCCAAGTTCCTCCTATTTC
CCAATCTTTCGCTGCCCTGAGCTTCGTAAATCCCTTGGAGGAAAGGAATT
TTTCACCTCTTGTCCGTGGCCTTGTCCTCGAGATCGGCCTCCCATCAGCC
TTGATCGCCTCGATAAATCCATCAGAAATGGCAGTTTCCTCTAGTGAAAA
CAATCCACAGCCAGGCGACGACAAAATGGCCCAAAAAGGCCGTGCTTTGC
AGGCTTTAAAAGATCAAATTTGTCCAGAGTCGGCCTTCAAGGCCCACTGC
CTCTGTTCCCATCAATTTCATGCCCATTTATTGGACACCTTGAGGACATG
TGGCCATTTATGGGGACTTGGACTTTCCCAACGAGGACAGCCAGGGAAAT
TGTGGAAAGTCAGCCATGCCTATGCAGGGTGCAGCTCAAGTCCATGCATC
ATTATGCAATGCCTTGCCACTCATTTTACACCCAAGGAGAACTTGGGTAT
GCATCAACTTACGTGAAGGAGATGTTCCCCTCTAATGGGTTCTAAATGTA
CAAAAGCCCAAAATGTGTCTTCATCAAGAGTCTCGAAAAATTACTACCTT
CAGCTCACAGGAGCTCCGGAAAGCTCTCGAGGGGGCTGAAGTTGTGCTTG
ATGCGATGGTCCTGGTTGGAGATCAAGATCGGGTCAAAAGGAATGAATGC
CTTTGGTGTATCAACCTTCTGTAGGTTCGTGGTCTCCATTCAACTGCGAA
TGGTCCTTAGTTGAGTTCCAAGTCACAGATTCGTCATCCAGGGTTGAGAC
TTCAACACTCTAGAGTTTCTCAGAACTCTTTGCAAAGTCCGGTCCTTGAT
TCAAAATGGCTAGCATTGCTACTATGGGCTGGGTAGGTGGACCCTTAGCC
TAATTATCAATCATTTTCCCATTTATTATTCCGCTTCATGGATATTATGC
TTGTAGCAAATGGGTGCGTGCACTATGGTTTTATTGTAGTATGGTTCGAA
TCTAAGAGGGTTCCTATTCCCACCGACGTGGTTCGCTTGTACCTGTTTCA
TAATGCTCACGTGATAGACACAAAATGTAGACTCACGTGATAGACATAAA
ACATAAACGAGGCATCCAAACGGACATGCTCATATAAACGTATAAATAAT
ATTTGGCAATCTCCTAAAAATAAACCACTCAAGGTAAAAATTGCATGTTC
CAACACAGAGCTGCTCACCAGGGAGTCCTGAAAGAGTTCCATCAACTCGC
GAATTATGAATTCGGCAATGGAGAACTTGTTGAACTGGAGTGTCTGCAAA
ATTCCCGCCTTGACCAAAGTCTTGGCCACAAATGAGGACTTGCGGCCTTC
ATACGTCCGAGAAGGCCCTTCAGAATTCAATGGGTATGACAAGCAAAACC
TGTGAGACAAGGGTTTTTAAGGGAAAATAAATGGGAGTAGTGGGGTTTGG
ATTGATAAATCAAAAGATCTCGGACACATCCAGCGACACTGGCGAGGAGA
AATCCTTCACGATATGAAACCCAGAACGGATAATATTTTCAAATATCATT
TATTCAAATTGGCTCAGTTTGGCGGAACTAAGGCACACAACATACTTGAG
GGTGAGATAATATTTCCGCCTCGGGTGTTGTTTATAGAGACACTTATCAT
AGCCGATATGGTGAAGTCGATGAACGGGGAAAATGTGCCCGATAAGGCGG
GGAATACTTTCCAATGCAAATGGAGAAAGCTTGCCATGATGCTGGAGCAA
AAAAAAATGTGCCAGTGAACGTGTCATAAGTTCTTTTCGCTTTGCTTGCA
GAACACGTTGAAGGCCATGAACAAGACCTTTTGTCCCGAATGTTTTGTTT
GTGCATACTGTGGCAAGATATTTGCCAATTCTCCCTTCTACCTGGAGGAC
GGTCTGCCTTATTGCGAATACGGTAGGATAATTTGATACAATGGTGCGCC
AAACTAAGAGCCTAAGGAAACGAATGGACCCCCTTTGCAGATTGGAACGA
GCTCTTCACCACCAAGTGTGTCTCTTGTGGATTTCCCATCGAGGCTGGCG
ATCGTTGGGTGGAAGCCCTCAACAATAACTATCATAGCCAATGTTTTAAC
TGCACTGTAAGACTCTTGGGAGTTCACCGTGAGTGAATGGGCTTCTCATA
ACCACCCACTTATCTGCCTTTCAGCTCTGCAAGAAGAATTTGGAGGGCGT
GGGCTTCTTTGTGAAGTCCGGCCGAGCCTTCTGCAAGAGTCACGCTCGAG
GTTGAGGACCCGAGCATAGAATACGCATGTAAATACAGCGCTTTGAAGGA
TCACTCTCTCTCTCTGGACCCAGGCAGTGGACAATAATTTTGGAACAACT
TGTGCCGACTAATAATAGTATGTTTTGAAGCTCTAGTACTCACTAACAAC
AACTTCACCGAGGATGAAGGCTGGACAATCTTCCCCATTGCACCACCACC
ATCCCGCGACATGTACAGTGACAAGATATTAATCAGATCCCATGACTTGC
TCTTCAATGCCTTTAGCATGGAAATTATAAATAAAATATCAATCATTTCC
TACA
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