maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1, maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1800_size27594-snap-gene-0.3-mRNA-1
Unique Namemaker-scaffold1800_size27594-snap-gene-0.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1800_size27594supercontigscaffold1800_size27594:7712..9396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
spt transcription factor family membermaker-scaffold1800_size27594-snap-gene-0.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:702maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:702Tigriopus kingsejongensisexon
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:703maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:703Tigriopus kingsejongensisexon
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:704maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:exon:704Tigriopus kingsejongensisexon
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:five_prime_utrmaker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:cdsmaker-scaffold1800_size27594-snap-gene-0.3-mRNA-1:cds-1957462Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1957463auto1957463Tigriopus kingsejongensispolypeptide
Tk04658Tk04658Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04658

>Tk04658 ID=Tk04658|Name=Tk04658|organism=Tigriopus kingsejongensis|type=polypeptide|length=243bp
LPLALAAPQPSGGYGYAGYGGPAYAQPAVQHGPACRTEYETLITKQCATS
YEKACRTETKTKYKTEYDTQCETISMKQCAPVARQVPDQVCATRYEQVCT
QDTQKTYDLSYEENCQDIAKQVCAPAAVGVGYGHARYGRSAEPSGYGPKC
STITERVCSKQPVKTPRYVNVPKCSKVPKTECQEITRTVTDTKCVDVPQQ
KCNQVPRQAAFEVPLEICENIPRENCVDVPKKVPKQVCKEYKH
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mRNA from alignment at scaffold1800_size27594:7712..9396+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1 ID=maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1|Name=maker-scaffold1800_size27594-snap-gene-0.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1685bp|location=Sequence derived from alignment at scaffold1800_size27594:7712..9396+ (Tigriopus kingsejongensis)
TGGCAGTTCCCTCCAGTGTCCAAATCGCCCTTCTCATTCCTACCCGCAGT
TCATCCTTTGCGCCCTTCTGCCTCTGGCCTTGGCCGCTCCTCAACCTTCC
GGTGGTTACGGCTACGCCGGCTATGGTGGCCCAGCTTACGCCCAGCCCGC
AGTTCAGCACGGACCCGCTTGCCGCACCGAGTACGAGACCCTCATCACCA
AGCAGTGCGCCACCTCGTACGAAAAGGCTTGCCGCACCGAGACCAAGACC
AAGTACAAGACCGAGTACGACACTCAGTGCGAGACCATCAGCATGAAGCA
GTGCGCTCCCGTGGCCCGTCAGGTCCCCGACCAGGTTTGCGCCACTCGTT
ATGAGCAGGTTTGCACCCAGGACACCCAGAAGACCTATGACCTTTCCTAC
GAGGAGAACTGCCAGGACATTGCCAAGCAGGTAGGTCATAGTCTCAGCTG
TGCTCGGAATCCCTTGACGGTTTTGATCGCTCAACTCGACCCTGGCTATG
GGAAGTTGTGGCCCAATGAGTGTCGACTACCTATAGGTCATGCAGTGTTA
AGGCAGTAGTCGGGTTTTTCGAGCGATTCAGGCAGTGGCTACAAATTGCC
CATTGCTTAACCATTTTTATAATGAGGCCTTCTTGACAGGACTCTAGCTA
ATGAGTAGGGTTGGCTCAACTTACTTTTGGATAAGTTAAATATGCTATTT
GGCATGCTTGGGATTTCCTTCTGAGAGGCAATGCAACCAATACATCTGAT
TCTTCAACACAAAGGCCTATGGGTCGGGCTTTTTTAGCTCATAGCCCAGT
TTTACCGCCGCTCAGCCTATGGGTAACCAAATAGGGCAGGGTTGACAGCT
TCCCGAAACGCTTCCAGGAGCCTCGCTCTGATATTTTTTTCAGTTCAAGC
AAAAATCAACCACCACAATGGCTTCCAAACACTTCAGGCCAGTTCCCTCT
CCAGCGTACTCTTGGGTAACATCCGGGATTCATCCACTTCGGGAGTGAAT
AATAAACCATCTCGACGATGAATACCATAACTGGGGCAAAATAATATGTA
CTGCAAGCAATTACAGGCGCACCCAGATTCTAAGTAATCTTGCTAATCCT
CAGGTGTGTGCCCCCGCTGCTGTGGGTGTCGGCTACGGTCATGCCCGCTA
TGGTCGCTCGGCTGAGCCTTCGGGTTATGGTCCCAAGTGTTCCACCATCA
CCGAGAGGGTTTGCTCCAAGCAACCCGTCAAGACCCCGAGATACGTGAAT
GTGCCCAAGTGTTCCAAGGTGCCCAAGACCGAATGCCAAGAGATCACCCG
CACTGTCACCGATACCAAGTGCGTGGATGTCCCCCAACAGAAGTGCAATC
AAGTCCCCCGACAGGTACGCAAACAGGTCCATCGCTCATTGTCGTATCCA
GGTACTACTACTCATTTCCTTCTGCCTCCTTCTAGGCTGCCTTCGAGGTT
CCCTTGGAGATCTGCGAGAACATTCCCCGCGAGAATTGCGTGGATGTTCC
CAAGAAGGTGCCCAAGCAGGTGTGCAAGGAGTACAAGCACTAAACTGATC
AGGACAAGTGCCATTGACTTCGAGTCCAACAAGCTTACTTTAGAAGCTTC
CACTCTTTTTCGCCAGTAGCACTTTCACTGCCATTGTTTCATACTCAATC
AAAATCTGGAATAAACTGATGGGCCGCACTGGAAA
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