maker-scaffold180_size281610-snap-gene-0.27-mRNA-1, maker-scaffold180_size281610-snap-gene-0.27-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold180_size281610-snap-gene-0.27-mRNA-1
Unique Name	maker-scaffold180_size281610-snap-gene-0.27-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold180_size281610	supercontig	scaffold180_size281610:33886..40491 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
nuclear pore complex protein nup205	maker-scaffold180_size281610-snap-gene-0.27	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1972189	auto1972189	Tigriopus kingsejongensis	polypeptide
Tk11855	Tk11855	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold180_size281610:33886..40491+

protein sequence of Tk11855

>Tk11855 ID=Tk11855|Name=Tk11855|organism=Tigriopus kingsejongensis|type=polypeptide|length=1998bp
MASGDVGDTAGGLWTPFKALASVVEDAILKKSPGLRHDLERSLRAHKPHF
TALLKNTSRSPSDAELVRKAQNEGIAWPPGSTSGKIEKIPAQVVEEALIL
AELFDMNEISSLQLLLLGEEQLNQYPGLTRGLVAVLLYYDGRKSLVQSLR
TLIQGRSGVTWTLELPEEISELVMDFTDELVEGGLVEKILGLLQRLDWNR
ENGMLQKNMALGHAKHRRQVHDLFHDINQSLADCILSFAAQSGLSQNDTT
RLIDYLSKVKIGDANVSGVIENTHLTLLMALLYALDVSALNKTDDGETTI
RALPILQDKSFIPIIHRELGPNSNRKWANPAIQSLAQFAWSMTVSTLRSV
PNLSTSIIDDDEAIMDVALDHRLFHHLPDVILSNPMVFKEEFYVRRLHQL
ITDFIVLMPLKVKELRNRADDAARNCLMHEQEGIHYNVPKAGQHFEHMMH
TIAKLYEEDPLNLGLALEYWCPPDGNSSGIAERYPQRQVSLYKFVRLAGD
LLMPTLYTPYVKMLVGLSNHPQSALHCFNLLKLNGLTGQQGANSVSWDHF
YSSMQQYFANLRQEQIPSYSSGNQSSTDVIYRMARPMTRGISPAEIDGLV
AVLKLVGTVSHQCEAVRIAMAENTAWQPLLVLMGLLGCAVPSPLKAEILV
TLGAFSKSSSISHLVWESIETSQIITTIPSVAPNRQCLGTELEEVETRNE
EFPMTQGFLQLLDILAHNSIPENLGAGARVPGLEPYLRFIRDSIFLKFST
RAYKIPDEKWKVASGCLKFFKVLLEHYDPSVSDFNSKFSGANQSNPERSF
LGRHAGFELMIHLLQSSETLRTILFILNEGCAHLDMFVPFPGKSNLEEAC
LLSLQILEIVLEKQGTFLACARESNTSMLLSPADQLLLGVNPRSGKPDHM
HNVAKFITYSWWLPAQTYFAIKVLTYVSSSVTAQEGLISTLNHNEDTAKT
IVKGFTDVLDNEDFNAVETHDEDTLQENGRYIAASRIAIVELLLNGLALP
VRASLSHFLLGFDLKKGVSKTTLQPPGINGAIRTPFHAVLTILRPTSNKS
ISPNLVSCPHLCEKAFHLIYQLASDFQTYEPILRYLRSSEDFLSSQLSVL
PLPEAVETVQVIKGIAWLLKTLAIELKLVCSSRLRSQVALLINLLLDASS
PNARALGEDSTFLNPETTFSQLSRSVPSTMMTSRPQASSRQHRLLEILNG
INFVELPVSVPNWELFDGNQIKDVIKSCEKPSFTGEKSIDVPKVHRILSE
ELANLQGATAISQRQIIQEDIKRILIYVVDLNASQERETAKKNILDAWRQ
VTEVMLCSVPGDILSSSCKQQLLLDVLQTLLNKVLVDDTLPELANQVSGV
VLLLLASLRQTYTSSAETGDSQGGRVDNFVSILDTTDLNRTSASVTTTSL
VYSTSLYVILKGLILWINSTSASAQKVRSNLYGALLNYLRIGKADPSSST
MAESTSYQKFRKANLDIILDFGENFLDILCRDTVSGHNIRRMLALSVLDE
LIKLDGRGRWTFYMSNQGYLRHIIESLIKEDEELLTLLSPSPGDLRLLYT
YESKMAMLVRLASTVSGAELLLESGLMVRLAEMNVFSARPDVSPALMEID
DSGFFPSPFSRYHQILFPALTLCQALLASLGSDNRSVTSQILHFITANDD
LVRTILKSRGLWSLTHLRELSLLTGLIAQCVSQNELIDESTADLGLPAFL
TLVQRLMLALLPQFDLNEKLMDLLEKHFSPGKSRDESVKLVLEINSHVMC
FAKNLVSKSLSQSKYCRIMFAPSLSEANENPNSAEERARVNIPNRPPSLG
QVVLIVKHLSLHLNETNRIVEELKTKLNTISHLSMDELDAHVSSEMALGG
NKVLSTNERRSLASSNIKTSMKEKEHEMGLAKGTIENAILLIWAHVEHFI
FYANVESDSTLTPYQRAYRLHIDDFHPPGDMDLELSSRSGLSKESVQKLK
EETKICFNDALFSKLERVNDIVARANPDGTSFLDIMIRRLKRLATLHT

mRNA from alignment at scaffold180_size281610:33886..40491+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold180_size281610-snap-gene-0.27-mRNA-1 ID=maker-scaffold180_size281610-snap-gene-0.27-mRNA-1|Name=maker-scaffold180_size281610-snap-gene-0.27-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6606bp|location=Sequence derived from alignment at scaffold180_size281610:33886..40491+ (Tigriopus kingsejongensis)
ATGGCATCGGGCGATGTGGGCGACACTGCTGGCGGGCTGTGGACGCCTTT
CAAGGCCCTGGCCTCCGTCGTCGAGGATGCCATCCTCAAGAAATCGCCCG
GTTTGCGCCACGACTTGGAGCGCTCGCTTCGGGCGCACAAACCGCATTTC
ACGGCGCTCCTCAAGAACACGGTAACTTGCACGGGGGCCTCAGGTGAACC
GAAGCTGGGGCGCTCTCAACCCCAGCCTGGGTGTGTTCTCCTTCCAGAGC
CGAAGTCCTTCGGATGCGGAATTGGTGCGGAAAGCCCAGAACGAGGGCAT
CGCATGGCCGCCAGGCTCGACCTCGGGCAAGATCGAGAAGATCCCGGCCC
AAGTGGTGGAGGAAGCCCTCATCCTGGCCGAGCTCTTTGACATGAATGAA
ATCTCCTCACTGCAACTGTTGCTCCTGGGTAATTGGCGGACTCGGCTTTT
CTTGTTCAATTGAACGGAAAATATCAGCCTGGCTCTAATCTTTCTAGGCG
AAGAGCAGTTGAATCAATATCCGGGCTTGACCCGAGGCTTGGTGGCTGTC
CTCTTGTACTACGATGGCCGAAAGTCCCTGGTCCAATCGCTGCGAACCCT
GATCCAGGGTCGATCGGGGGTGACCTGGACCCTGGAACTCCCCGAAGAGA
TTTCGGAGCTGGTCATGGACTTTACCGACGAGCTCGTGGAGGGAGGATTG
GTGGAGAAGATTTTGGGTAAGATTGTGGGGCAGGTCTGAACATCCTGAAG
CTGGGAATTGAACCCACCAGTCTACCCGCAGGTCTTTTGCAACGCTTGGA
TTGGAACCGCGAGAATGGGATGCTCCAAAAGAACATGGCCCTGGGCCATG
CCAAGCATCGGCGGCAAGTCCACGACCTCTTCCATGACATCAACCAGAGT
CTGGCCGACTGCATCTTGTCTTTCGCCGCCCAGAGTGGCCTGAGCCAGAA
CGATACCACCCGCCTCATCGACTATCTTTCCAAGGTCAAAATCGGGGATG
CTAACGTCTCGGGCGTGATTGAGAACACGCACCTCACGCTCCTGATGGCC
TTGCTCTATGCCCTGGATGTGAGTGCCCTGAACAAGACGGACGATGGTGA
GACCACCATTCGCGCCCTCCCAATTCTCCAGGACAAGAGTTTCATCCCCA
TCATTCATCGGGAGTTGGGACCCAACTCCAATCGAAAGTGGGCCAACCCC
GCCATTCAGTCCCTGGCCCAGTTTGCCTGGTCCATGACGGTGTCCACCTT
ACGCTCCGTCCCCAACCTGTCCACCAGTATCATTGACGACGACGAAGCCA
TCATGGACGTGGCTCTGGATCACCGGCTCTTCCATCACCTTCCCGACGTC
ATTTTGAGCAATCCTATGGTGTTCAAAGAGGAGTTCTACGTCCGTCGATT
GCACCAGCTCATCACGGACTTTATAGTGCTCATGCCCCTCAAAGTGAAGG
AACTCCGAAATCGAGCCGACGATGCAGCTCGTAACTGCTTGATGCACGAG
CAGGAAGGCATCCACTACAATGTGCCTAAAGCTGGCCAACACTTTGAACA
CATGATGCACACCATTGCCAAGCTCTATGAGGAGGATCCCTTGAACTTGG
GCTTGGCTCTTGAGTATTGGTGTCCTCCGGACGGCAACAGCTCCGGAATC
GCGGAGCGATATCCCCAGAGACAAGTGTCACTGTACAAATTTGTTCGATT
GGCCGGTGACCTCCTGATGCCCACCCTCTACACCCCGTACGTGAAGATGC
TCGTTGGGCTCTCCAATCATCCTCAGTCGGCGTTGCACTGCTTCAACCTC
TTGAAGCTAAATGGTCTCACTGGGCAGCAGGGGGCCAACTCAGTGAGCTG
GGACCACTTTTACTCGTCCATGCAACAGTATTTCGCCAACTTACGGCAAG
AGCAGATCCCATCCTACTCGTCCGGAAACCAATCTAGCACGGATGTGATC
TACCGCATGGCCCGACCCATGACGCGTGGAATATCACCCGCCGAAATCGA
CGGCCTCGTCGCCGTCCTGAAACTCGTGGGGACCGTGTCGCACCAATGTG
AGGCCGTGAGGATTGCAATGGCCGAGAACACAGCCTGGCAACCTCTGCTG
GTGCTCATGGGGCTTTTGGGATGCGCTGTCCCCTCTCCTCTGAAAGCCGA
GATTCTGGTCACCTTGGGAGCCTTCTCCAAGTCGTCGAGTATTTCCCATT
TGGTGTGGGAGAGCATCGAGACGTCTCAGATCATCACCACGATTCCAAGT
GTCGCACCCAATCGTCAGTGTTTGGGAACGGAATTGGAGGAGGTCGAGAC
GAGGAACGAAGAGTTCCCCATGACCCAAGGCTTCCTCCAACTGTTAGACA
TCTTGGCGCATAATTCAATTCCCGAAAATCTCGGAGCTGGCGCCCGTGTG
CCCGGTCTCGAGCCATATCTGAGATTTATTCGGGATTCGATCTTCCTCAA
GTTCAGCACGAGAGCCTACAAGATTCCGGACGAGAAGTGGAAGGTGGCCT
CGGGATGTTTGAAGTTCTTCAAAGTCCTTCTGGAGCATTATGATCCCTCC
GTGTCTGACTTCAACTCGAAGTTTTCTGGCGCCAATCAGTCCAATCCAGA
GAGAAGTTTCCTCGGACGTCATGCTGGTTTCGAGCTAATGATTCATCTAC
TCCAGAGCTCCGAAACGCTGAGGACTATCCTTTTCATTCTGAACGAGGGA
TGTGCCCATTTGGACATGTTTGTCCCGTTTCCGGGCAAGTCCAACTTGGA
AGAAGCCTGCCTGCTGAGTCTCCAGATCCTGGAAATTGTACTGGAGAAAC
AGGGGACGTTTCTAGCATGTGCCCGAGAGTCGAACACGTCTATGCTCCTC
TCACCTGCGGACCAGCTGCTCCTTGGAGTAAATCCTAGGTCTGGAAAACC
CGATCACATGCACAACGTGGCCAAATTCATCACCTACTCGTGGTGGTTGC
CCGCGCAAACTTACTTCGCCATCAAGGTTCTGACCTATGTTTCGAGCTCA
GTCACAGCACAAGAGGGCCTGATATCGACCTTGAATCATAACGAAGACAC
GGCCAAGACCATTGTCAAAGGCTTCACCGACGTTCTCGATAACGAAGACT
TTAATGCCGTAGAAACCCACGACGAGGACACTTTGCAGGAGAACGGACGC
TACATCGCCGCCTCCAGGATTGCCATTGTGGAACTACTGCTCAATGGTCT
CGCCCTCCCGGTACGAGCCTCATTGAGCCATTTCCTCTTGGGCTTCGATC
TGAAGAAAGGCGTGAGCAAGACAACGCTACAACCACCGGGGATCAATGGA
GCCATCCGAACTCCCTTCCACGCCGTTCTGACCATACTGAGGCCAACTTC
GAACAAATCCATTTCCCCCAATCTCGTGTCTTGTCCTCATCTATGCGAAA
AAGCCTTTCATCTGATCTATCAGCTCGCTTCCGATTTCCAAACCTACGAA
CCTATTCTGAGGTACCTGCGGTCCTCGGAGGACTTTTTGAGCTCCCAACT
GTCTGTCCTCCCCCTTCCCGAGGCTGTTGAGACCGTTCAAGTGATCAAAG
GCATTGCTTGGCTCCTCAAAACTCTGGCCATTGAGTTGAAGTTGGTGTGC
TCCTCTAGGCTCAGATCTCAAGTAGCTCTGCTCATCAACCTCCTCCTGGA
TGCCAGCTCTCCCAACGCCCGAGCTCTTGGCGAGGATTCTACCTTCCTCA
ACCCGGAGACCACATTCTCTCAGCTATCCCGATCGGTTCCCAGTACCATG
ATGACTTCAAGACCACAGGCTTCTTCGAGGCAACATCGCCTTCTCGAGAT
TCTGAACGGAATCAACTTTGTGGAGCTTCCTGTGAGCGTTCCAAATTGGG
AACTCTTTGACGGCAATCAGATCAAGGATGTGATCAAGAGCTGTGAAAAG
CCCTCCTTCACCGGTGAGAAGTCCATCGACGTTCCCAAGGTTCACAGGAT
CCTCAGTGAAGAATTGGCCAACCTCCAGGGAGCTACGGCCATTAGCCAGA
GACAAATCATCCAAGAAGACATCAAAAGGTAAGCCAATGTCCCTGCTCAA
GTCTGACCATCAAGGCAATATTTTCTCAATCCTTGCAGAATCCTCATCTA
CGTCGTGGACTTGAACGCCTCCCAGGAAAGAGAAACGGCCAAGAAAAACA
TCCTGGATGCTTGGCGCCAAGTCACGGAAGTGATGCTTTGCTCAGTCCCA
GGGGACATCCTCTCGTCAAGCTGCAAGCAACAGCTCTTATTGGATGTACT
TCAAACCCTACTGAACAAGGTCTTGGTGGATGACACCTTGCCCGAGCTAG
CCAATCAAGTCTCTGGTGTGGTCCTCCTCCTTCTGGCTTCATTACGGCAG
ACCTACACGAGCTCTGCCGAGACTGGGGACTCTCAAGGAGGCCGTGTGGA
TAACTTTGTGTCCATCCTGGACACCACTGATCTCAATCGCACATCGGCGA
GCGTGACCACCACTTCCTTGGTGTACTCCACGTCCTTGTATGTAATCCTG
AAAGGACTCATTTTATGGATCAATTCCACGAGTAAGTGCCGCCGCATGTT
TACTTTCTTTATTGATGTCAACTCATGGTCCTCATCAGCGGCACGATTAA
CATGATCCTGCGAGGGGAAACGAGAACGTCGATTGAGGAACATGGCCAAT
ATTCCCCCCCTTTTCCAGGTGCCTCTGCCCAGAAAGTTCGCTCGAACTTG
TATGGTGCGTTGCTCAACTACCTGCGGATTGGCAAGGCGGATCCATCCTC
GAGTACCATGGCCGAGTCGACCTCCTATCAGAAGTTCCGCAAGGCCAATT
TGGACATCATCCTGGACTTTGGGGAGAATTTCTTGGATATCTTGTGCCGG
GACACCGTGAGTGGACACAACATTCGTAGGATGTTGGCCCTCAGCGTCTT
GGACGAACTCATCAAACTGGATGGTCGAGGTCGGTGGACTTTTTATATGT
CCAACCAGGGCTATCTCAGACACATCATCGAGTCCCTCATCAAAGAAGAC
GAGGAGCTGCTCACTCTCCTCAGCCCTTCCCCTGGTGACCTTCGTCTCCT
GTACACGTACGAATCCAAGATGGCCATGCTCGTCCGTCTGGCCTCAACCG
TGAGTGGAGCCGAACTGTTGTTGGAATCGGGACTCATGGTACGATTGGCC
GAGATGAACGTGTTCTCGGCCCGCCCGGACGTGTCCCCAGCCCTGATGGA
AATCGATGACAGCGGGTTCTTCCCGTCGCCATTCAGTCGCTACCATCAGA
TCCTGTTTCCGGCCCTCACTCTCTGCCAGGCCCTACTGGCCAGTCTTGGC
TCGGACAACCGCTCCGTGACGTCTCAAATCCTCCATTTCATCACTGCCAA
CGATGATCTCGTGCGCACCATCCTCAAGAGTCGCGGCCTCTGGAGCTTGA
CCCATTTGCGAGAGTTGTCCCTCCTCACCGGCCTCATTGCCCAATGCGTG
TCCCAGAATGAATTGATTGACGAATCCACTGCGGACCTTGGCCTTCCGGC
CTTTTTGACTCTGGTTCAGAGGCTGATGCTCGCACTTCTCCCTCAGTTTG
ATCTCAATGAGAAGCTCATGGATTTGCTGGAGAAGCACTTCAGCCCCGGG
AAATCTCGGGATGAATCCGTCAAACTTGTGCTCGAGATCAATTCGCATGT
GATGTGCTTTGCCAAAAATCTCGTCTCGAAGAGCTTGAGTCAGTCTAAAT
ACTGCAGAATTATGTTTGCACCCAGTCTATCAGAGGCCAATGAGAACCCC
AATAGCGCGGAAGGTAGGACTGATTCGTTACTAGATGATGATGCCAGAGT
TAATTCCTCAACGATTTTTTTCTCCAGAGCGTGCTCGAGTGAACATCCCA
AATCGCCCTCCTAGTTTGGGACAAGTTGTCCTCATCGTCAAGCATCTATC
GCTCCACTTGAACGAAACTAATCGAATTGTTGAGGAGCTCAAGACCAAAT
TGAACACGATTTCCCACTTGTCTATGGACGAGCTGGACGCCCATGTCTCG
TCAGAGATGGCGCTTGGCGGTAACAAGGTCCTCTCCACCAACGAACGCCG
AAGTTTGGCCTCCTCCAATATCAAGACGTCTATGAAGGAGAAAGAGCATG
AGATGGGATTGGCTAAAGGCACCATTGAGAACGCCATCCTTCTCATCTGG
GCCCACGTGGAGCATTTCATCTTCTATGCCAATGTCGAGTCAGACTCGAC
GTTGACTCCATACCAAAGGGCTTATCGGCTCCACATTGGTAAGTGAAGGA
CGAGAATATGTGCTGAAACAGACGCATTTAGAACTATCTGTGAGCTACTT
TTTCTTCTTCAGATGACTTCCATCCTCCCGGAGACATGGACTTGGAGCTC
TCATCTCGGAGTGGACTGTCCAAGGAATCTGTGCAGAAGCTGAAGGAGGA
AACTAAGATATGTTTTAACGACGCACTCTTCTCCAAGTTGGAGCGAGTCA
ACGACATTGTGGCCAGGGCTAATCCAGATGGTACGAGCTTCCTGGATATC
ATGATCAGGCGGCTCAAAAGACTTGCTACATTGCATACCTAATGACATTG
TGCGATTGTGAATAAAAACCCTGCCAATATGAACAAGTAGGAAGAGGCAT
TTGGCA

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