Tk11855, Tk11855 (polypeptide) Tigriopus kingsejongensis

Overview


Name	Tk11855
Unique Name	Tk11855
Type	polypeptide
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length	1998

Associated RNAi Experiments

Nothing found

InterPro

Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 412..432
None	No IPR available	PANTHER	PTHR31344	FAMILY NOT NAMED	coord: 14..1992
IPR021827	Nucleoporin Nup186/Nup192/Nup205	PFAM	PF11894	Nup192	coord: 14..1679 e-value: 0.0 score: 1071.6
IPR021827	Nucleoporin Nup186/Nup192/Nup205	PANTHER	PTHR31344:SF0	NUCLEAR PORE COMPLEX PROTEIN NUP205	coord: 14..1992

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Tigriopus kinsejongensis Genome annotation	2018-02-12
InterProScan T. kingsejongensis	2018-08-30

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
maker-scaffold180_size281610-snap-gene-0.27-mRNA-1	maker-scaffold180_size281610-snap-gene-0.27-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Tk11855 ID=Tk11855|Name=Tk11855|organism=Tigriopus kingsejongensis|type=polypeptide|length=1998bp
MASGDVGDTAGGLWTPFKALASVVEDAILKKSPGLRHDLERSLRAHKPHF
TALLKNTSRSPSDAELVRKAQNEGIAWPPGSTSGKIEKIPAQVVEEALIL
AELFDMNEISSLQLLLLGEEQLNQYPGLTRGLVAVLLYYDGRKSLVQSLR
TLIQGRSGVTWTLELPEEISELVMDFTDELVEGGLVEKILGLLQRLDWNR
ENGMLQKNMALGHAKHRRQVHDLFHDINQSLADCILSFAAQSGLSQNDTT
RLIDYLSKVKIGDANVSGVIENTHLTLLMALLYALDVSALNKTDDGETTI
RALPILQDKSFIPIIHRELGPNSNRKWANPAIQSLAQFAWSMTVSTLRSV
PNLSTSIIDDDEAIMDVALDHRLFHHLPDVILSNPMVFKEEFYVRRLHQL
ITDFIVLMPLKVKELRNRADDAARNCLMHEQEGIHYNVPKAGQHFEHMMH
TIAKLYEEDPLNLGLALEYWCPPDGNSSGIAERYPQRQVSLYKFVRLAGD
LLMPTLYTPYVKMLVGLSNHPQSALHCFNLLKLNGLTGQQGANSVSWDHF
YSSMQQYFANLRQEQIPSYSSGNQSSTDVIYRMARPMTRGISPAEIDGLV
AVLKLVGTVSHQCEAVRIAMAENTAWQPLLVLMGLLGCAVPSPLKAEILV
TLGAFSKSSSISHLVWESIETSQIITTIPSVAPNRQCLGTELEEVETRNE
EFPMTQGFLQLLDILAHNSIPENLGAGARVPGLEPYLRFIRDSIFLKFST
RAYKIPDEKWKVASGCLKFFKVLLEHYDPSVSDFNSKFSGANQSNPERSF
LGRHAGFELMIHLLQSSETLRTILFILNEGCAHLDMFVPFPGKSNLEEAC
LLSLQILEIVLEKQGTFLACARESNTSMLLSPADQLLLGVNPRSGKPDHM
HNVAKFITYSWWLPAQTYFAIKVLTYVSSSVTAQEGLISTLNHNEDTAKT
IVKGFTDVLDNEDFNAVETHDEDTLQENGRYIAASRIAIVELLLNGLALP
VRASLSHFLLGFDLKKGVSKTTLQPPGINGAIRTPFHAVLTILRPTSNKS
ISPNLVSCPHLCEKAFHLIYQLASDFQTYEPILRYLRSSEDFLSSQLSVL
PLPEAVETVQVIKGIAWLLKTLAIELKLVCSSRLRSQVALLINLLLDASS
PNARALGEDSTFLNPETTFSQLSRSVPSTMMTSRPQASSRQHRLLEILNG
INFVELPVSVPNWELFDGNQIKDVIKSCEKPSFTGEKSIDVPKVHRILSE
ELANLQGATAISQRQIIQEDIKRILIYVVDLNASQERETAKKNILDAWRQ
VTEVMLCSVPGDILSSSCKQQLLLDVLQTLLNKVLVDDTLPELANQVSGV
VLLLLASLRQTYTSSAETGDSQGGRVDNFVSILDTTDLNRTSASVTTTSL
VYSTSLYVILKGLILWINSTSASAQKVRSNLYGALLNYLRIGKADPSSST
MAESTSYQKFRKANLDIILDFGENFLDILCRDTVSGHNIRRMLALSVLDE
LIKLDGRGRWTFYMSNQGYLRHIIESLIKEDEELLTLLSPSPGDLRLLYT
YESKMAMLVRLASTVSGAELLLESGLMVRLAEMNVFSARPDVSPALMEID
DSGFFPSPFSRYHQILFPALTLCQALLASLGSDNRSVTSQILHFITANDD
LVRTILKSRGLWSLTHLRELSLLTGLIAQCVSQNELIDESTADLGLPAFL
TLVQRLMLALLPQFDLNEKLMDLLEKHFSPGKSRDESVKLVLEINSHVMC
FAKNLVSKSLSQSKYCRIMFAPSLSEANENPNSAEERARVNIPNRPPSLG
QVVLIVKHLSLHLNETNRIVEELKTKLNTISHLSMDELDAHVSSEMALGG
NKVLSTNERRSLASSNIKTSMKEKEHEMGLAKGTIENAILLIWAHVEHFI
FYANVESDSTLTPYQRAYRLHIDDFHPPGDMDLELSSRSGLSKESVQKLK
EETKICFNDALFSKLERVNDIVARANPDGTSFLDIMIRRLKRLATLHT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021827	Nup186/Nup192/Nup205

Vocabulary: **Cellular Component**
Term	Definition
GO:0005643	nuclear pore

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