maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1, maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1_size3401120-snap-gene-15.30-mRNA-1
Unique Namemaker-scaffold1_size3401120-snap-gene-15.30-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:1545098..1547088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
dead deah box helicasemaker-scaffold1_size3401120-snap-gene-15.30Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:exon:1081maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:exon:1081Tigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:exon:1082maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:exon:1082Tigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:five_prime_utrmaker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:cdsmaker-scaffold1_size3401120-snap-gene-15.30-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021793auto2021793Tigriopus kingsejongensispolypeptide
Tk04895Tk04895Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04895

>Tk04895 ID=Tk04895|Name=Tk04895|organism=Tigriopus kingsejongensis|type=polypeptide|length=564bp
LTADGFAELRGLMETGRAVVDQVTHLSVWIGSARDFVRMGDLSKAADCLA
LVEEQSSLLNSNGWYLYLAAQVLLAHHKDHTLIRDSRLEEIHWLQMHSPS
RLGEQARSHQLPLSPELLKNLDSLGYTEMTPIQASALPVLLEGKDLIAQA
KTGSGKTAAFALGVLQKLDQKDFSVQALVLAPTRELAEQIAVEMRRLART
TANVKVLTLVGGTPLPPQANALAKGAQIIIGTPGRVEDHIGKGTLRLESL
TTLVLDEADRMLDMGFQESIDKIIARTPSRRHTLLFSATFPSQIKKIAGR
VMRDPVMVKVESSDDGAQIEQRFFKVESDNDRMLALQLVLQQQRPESALV
FCATKVDVRDVTEQLSRAGHSVLALHGDLEQKERDQVLVRFSNKSIPVLI
ATDVAARGLDIDALDMVINYQPARDPEVHTHRIGRTGRAGATGIACTFFN
QREAYKLAISEKSFDADESPLPLPPRELLNQPPLSSGWATVVIEGGRKHK
LRPGDIVGAITAGGEYEASQLGKITVQTTRSFVAVDRKIAKAVAIKLTNG
KLKGRKYKSRLFAG
back to top

mRNA from alignment at scaffold1_size3401120:1545098..1547088+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1 ID=maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1|Name=maker-scaffold1_size3401120-snap-gene-15.30-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1991bp|location=Sequence derived from alignment at scaffold1_size3401120:1545098..1547088+ (Tigriopus kingsejongensis)
GTGAAGATCATCTGACAGCGGATGGCTTTGCCGAGCTGCGAGGTCTCATG
GAGACGGGGCGTGCTGTTGTCGATCAGGTCACGCATTTGTCGGTTTGGAT
TGGCTCGGCTCGGGACTTTGTACGGATGGGAGATCTATCGAAAGCGGCAG
ACTGTTTGGCTTTGGTGGAAGAGCAATCGTCGCTACTCAACTCGAATGGC
TGGTATTTGTATCTGGCCGCTCAAGTGCTCTTGGCGCATCACAAAGATCA
CACGCTTATTCGTGATAGTCGGCTGGAAGAAATCCATTGGCTGCAAATGC
ACTCCCCGAGTCGATTGGGTGAGCAAGCCAGAAGTCATGTGTGTTTCCAC
ATTGCGGGCAAAGGCCGTTCATATAGGGCAATGGAGGGTGGCAGGAACCT
GCTTCCTGATGAAATAAAATTCAGCCTTAATGCGATAAATAGCCGTTGTC
GTGAGAGTTTGCAGCTGCTTGAGCAATTACCTGTTGAAGCTGCTCAGTAA
GCGATAGATATTCGAGAACAACTGCGTGAAAGCGCGCTGTTGGAAGGCTT
CGGGTAAACCCTTTGTGATAGGGTACGTGCTTTAACTTCTCCGTCGGATA
GTCCTGTGAATTCGTTTGCTTTTCAGCAATTGCCGCTCTCGCCTGAGCTT
CTAAAAAATCTAGACAGTCTTGGTTACACCGAGATGACGCCGATCCAAGC
GAGCGCATTGCCCGTGCTGCTGGAGGGCAAAGATTTGATCGCACAGGCGA
AAACCGGCTCGGGGAAAACAGCGGCTTTTGCCTTAGGCGTTTTGCAGAAG
CTCGATCAAAAGGATTTCAGCGTGCAAGCGCTTGTCTTGGCGCCCACGCG
AGAGCTGGCTGAGCAGATTGCTGTTGAAATGCGCCGTCTGGCGCGCACCA
CCGCTAATGTGAAAGTGCTGACGCTTGTCGGTGGCACACCGCTGCCACCG
CAGGCTAATGCCTTGGCCAAAGGCGCGCAGATCATCATCGGCACGCCTGG
GCGAGTGGAAGATCATATCGGTAAGGGCACATTACGCCTCGAAAGCCTAA
CGACCCTCGTGCTCGATGAAGCGGACCGTATGTTGGACATGGGTTTTCAA
GAGAGCATCGACAAAATAATCGCTCGTACACCATCTCGTCGCCATACTTT
ATTGTTTAGCGCGACTTTCCCCAGCCAGATCAAGAAAATCGCAGGACGCG
TCATGCGCGACCCTGTCATGGTGAAAGTGGAAAGCTCAGACGACGGTGCG
CAGATTGAGCAGCGATTTTTCAAGGTAGAGAGTGACAACGACCGGATGTT
GGCGCTGCAGTTAGTGTTGCAACAACAGCGGCCTGAGTCGGCGCTAGTAT
TCTGCGCCACCAAAGTGGACGTGCGTGACGTGACAGAGCAATTGAGCCGG
GCGGGTCACAGTGTGCTGGCGTTACACGGAGACCTAGAACAGAAAGAGCG
TGACCAAGTGCTGGTACGCTTTTCCAACAAAAGCATCCCGGTTTTGATTG
CCACCGATGTGGCTGCACGTGGGCTGGACATCGATGCCTTAGATATGGTG
ATCAACTACCAGCCAGCCCGTGACCCCGAAGTGCACACCCACCGTATAGG
TCGTACCGGCCGAGCGGGTGCGACGGGCATCGCTTGTACCTTCTTCAATC
AGCGAGAGGCCTACAAGCTCGCGATATCGGAGAAGAGCTTTGACGCCGAT
GAGTCGCCCCTGCCTTTGCCACCACGGGAGCTACTCAATCAGCCGCCGTT
AAGCAGTGGGTGGGCCACCGTGGTCATCGAAGGTGGGCGTAAGCACAAGC
TTCGACCGGGTGACATCGTGGGAGCAATCACCGCGGGTGGGGAATATGAA
GCGTCGCAGTTAGGTAAAATAACGGTGCAAACCACGCGCAGTTTTGTTGC
GGTGGATCGCAAGATCGCCAAGGCTGTCGCCATAAAACTGACCAACGGCA
AGCTCAAAGGCCGGAAATACAAATCGAGACTGTTCGCCGGC
back to top
Add to Basket