|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold1_size3401120 | supercontig | scaffold1_size3401120:310513..314366 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:exon:1011 | maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:exon:1011 | Tigriopus kingsejongensis | exon |
| maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:exon:1012 | maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:exon:1012 | Tigriopus kingsejongensis | exon |
| maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:cds | maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:cds | maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1:cds-2016321 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk04855 >Tk04855 ID=Tk04855|Name=Tk04855|organism=Tigriopus kingsejongensis|type=polypeptide|length=943bp
MQLNPSEISELIKDRIGNFEAAAEARTEGTIVSLNDGIARIHGLSDVMYG
EMIECGGDTYAMALNLERDSVGAVVLGGYSHLSEGDKVRCTGRILEVPVG
PELLGRVVDSLGTPIDGKGPLGTTQTAPIEKVAPGVITREPVNQPVQTGL
KSIDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGTGIKCVYVAIGQ
KQSSIATVVAKLEEHGALEHTIIVAAGASDSAALQYIAPYAGCSMGEYFR
DIGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLER
SARINAVEVEKRTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITD
GQIFLESDLFNAGIRPAINAGVSVSRVGGAAQTKVISKLGGGVRLALAQY
RELAAFAQFASDLDEQTRMQLERGIRVVELMKQGQYSPLSIGEMATSLYA
INEGYLDDVDATKVVAFEASLHAYARDNHKDLRTIMSSGTIVEVIGPVID
VEFPRDAVPKVFEALNVTDANLVLEVQGQLGDGIVRTIAMGSSDGLRRGL
AVENTGAPISVPVGQKTLGRIMDVLGEPVDEAGPIGAEQKWAIHREAPSY
AEQSGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNI
AIEHSGFSVFAGVGERTREGNDFYHEMTDSKVIDKVSLVYGQMNEPPGCR
LRVALTGLTMAEFFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVG
YQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD
ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARSVQNTLQR
YKELRDIIAILGMDELSEEDKMLVYRARKIQRFLSQPFFVAEVFTGAPGK
YVSLKDTIKAFQGIVAGDYDDLPEQAFYMVGSIDEAVERAKSM back to topmRNA from alignment at scaffold1_size3401120:310513..314366+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1 ID=maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1|Name=maker-scaffold1_size3401120-snap-gene-3.37-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3854bp|location=Sequence derived from alignment at scaffold1_size3401120:310513..314366+ (Tigriopus kingsejongensis)
ATGCAACTAAACCCATCAGAAATCAGCGAGCTGATTAAAGATCGCATCGG
CAATTTTGAAGCCGCTGCGGAAGCTCGTACAGAGGGCACAATCGTCAGCT
TGAATGACGGTATTGCCCGCATACACGGTCTCTCTGACGTCATGTACGGC
GAGATGATCGAATGCGGTGGCGACACATACGCCATGGCACTGAACCTCGA
GCGCGACTCTGTCGGTGCCGTGGTTCTCGGCGGCTACTCTCACTTGTCCG
AAGGGGACAAAGTGCGTTGTACTGGCCGTATCCTAGAAGTACCTGTCGGC
CCTGAGCTGCTCGGTCGTGTTGTCGATTCTCTCGGCACACCAATCGACGG
TAAAGGTCCTTTGGGCACAACACAAACTGCACCGATCGAGAAAGTAGCGC
CTGGCGTTATCACTCGTGAGCCAGTTAACCAGCCTGTACAGACTGGTCTT
AAGTCTATCGATGCCATGGTGCCAATTGGCCGCGGCCAGCGTGAGCTGAT
CATCGGTGACCGTCAGACAGGTAAAACAGCTGTAGCGATCGACGCCATCA
TCAATCAGAAAGGCACAGGCATTAAGTGTGTCTATGTTGCGATTGGTCAG
AAGCAGTCTTCTATCGCCACTGTAGTAGCTAAGCTAGAAGAGCACGGCGC
ACTAGAGCACACAATCATTGTGGCTGCTGGTGCATCTGACTCTGCTGCAC
TTCAGTACATCGCGCCTTACGCGGGTTGTTCCATGGGCGAGTACTTTCGT
GACATTGGTGAAGACGCACTGATCGTCTATGACGATTTGACTAAGCAAGC
ATGGGCTTACCGTCAGGTATCTCTTCTGCTACGTCGTCCGCCAGGTCGTG
AAGCTTACCCAGGTGATGTTTTCTACTTGCACTCTCGTTTACTTGAGCGT
TCAGCTCGAATCAACGCGGTAGAAGTTGAAAAGCGCACTAACGGTGCTGT
AAAAGGCCAGACAGGTTCATTGACTGCTCTGCCTATCATCGAAACTCAAG
CGGGTGACGTTTCTGCTTTCGTACCAACCAACGTGATCTCAATCACTGAC
GGCCAGATCTTTCTTGAATCTGACCTGTTTAACGCCGGCATACGCCCTGC
GATAAACGCCGGTGTTTCTGTATCTCGCGTAGGTGGTGCTGCACAGACTA
AAGTCATCTCAAAATTGGGTGGCGGTGTTCGACTGGCATTGGCTCAGTAT
CGTGAATTGGCGGCTTTCGCCCAGTTCGCTTCTGACCTTGACGAACAGAC
TCGTATGCAGTTGGAGCGTGGTATTCGTGTTGTTGAGTTGATGAAGCAGG
GTCAATATTCCCCGCTGAGCATCGGCGAAATGGCTACGTCACTTTACGCT
ATCAACGAAGGCTACCTCGATGATGTAGACGCTACTAAGGTTGTTGCCTT
CGAAGCTTCACTTCATGCCTATGCTCGTGATAACCACAAAGATTTGTTGG
ATAAAATCGTCGACACTGGCGCTTTTTCTGATGAGATCACTGGCGGTTTG
AAGCAGCTCGTTGAAGGCTTTAAAGCCAACGGCGTCTGGTAGAAACGGGA
GCAGTTGAATGGCCAGTGCAAAAGAGATACGCACGAAGATCAAGAGTATT
CAAAATACTCAGAAGATCACCAAGGCCATGGAGATGGTAGCGGCGAGCAA
AATGCGCCGCGCTAAGGATCGGATGAATGCAACGAAGCCCTACGCGCAAA
AAATGCGTGAAATGGTGGCCCACATTGCAGCAGCCAATTCTGAATACCGT
CATACATACCTTGTAGATCGTCCGGTCAAGCGTGTGGGCGTGATTATTAT
CGCCACAGATCGCGGCTTGTGCGGCGGTTTGAACACAAACTTGTTCAAGC
GCGCACTTGGGGTCTTGAGAGACTATGAAGAACAAGACGTCGAAGTTGAT
GTTTGTCTTTTTGGTCGTAAGTCCGGTAGCTACTTTAAACGGCTTAATTG
CAATATTGTTTCCGAGGCTTCTGGCCTGGGGGACGCACCTGAAATTAACG
ACATCATGGGTGCTGTTCAAGTTATGTTGAACGCACACGCGGAAGGCAAG
ATCGATCGCCTGTTGTTGATTCAAAACCAGTTCGTCAACACCATGTCGCA
ACAGTCCGAAACGGTCCAGCTGATTCCAGTGAAGTCCGATGGTGATGAGT
TGTCAGACAAGCATTGGGATTATATCTATGAACCCGATGCTAAGGATGTT
GTTGATGGCGTGATGACTCGCTATATGGAGTCGTTGGTTTATCAAGGTGT
CGTGGAGAATGTTGCCTGCGAGATGGCAGCTCGAATGGTCGCTATGAAGT
CGGCCTCTGATAATGCGGGAACGCTTATTGGCGAGCTACAGCTTGTATAC
AACAAAGCTCGACAAGCAGCTATCACGCAAGAGATTTCCGAAATAGTCGG
CGGTGCGGCGGCGGTTTCCTGATGAAACTACTAACGCAATCACGAATTAA
TACATTGAATTTTCCAGGAGAACCATCATGAGTTCTGGAACGATCGTAGA
AGTCATCGGTCCTGTCATTGACGTGGAATTCCCACGTGACGCAGTGCCGA
AGGTATTTGAGGCTTTGAACGTTACTGACGCAAACCTCGTACTCGAAGTG
CAAGGTCAGTTGGGTGACGGAATCGTACGTACTATTGCTATGGGTTCGTC
AGACGGTCTTCGTCGCGGCCTAGCTGTAGAAAACACGGGTGCACCCATTT
CTGTACCTGTTGGTCAGAAAACTCTCGGTCGCATCATGGATGTGCTCGGT
GAGCCAGTAGATGAAGCAGGCCCTATCGGCGCTGAGCAGAAGTGGGCGAT
TCACCGTGAAGCACCTTCTTACGCTGAGCAATCAGGTTCTACTGAGCTGC
TAGAGACAGGCATCAAGGTAATCGATTTGCTTTGCCCCTTTGCAAAAGGC
GGAAAGGTTGGTCTGTTCGGTGGTGCTGGTGTAGGCAAGACCGTCAACAT
GATGGAGCTTATCCGTAACATCGCGATCGAGCACTCAGGTTTCTCTGTGT
TCGCAGGTGTTGGTGAGCGTACTCGCGAGGGTAACGATTTCTACCATGAG
ATGACTGATTCAAAAGTTATCGATAAGGTATCTCTCGTATACGGTCAGAT
GAATGAGCCTCCTGGCTGTCGTCTACGTGTAGCTCTGACTGGCCTGACCA
TGGCAGAGTTCTTCCGTGACGAAGGTCGTGACGTACTGTTGTTCGTTGAC
AACATCTACCGTTACACACTCGCCGGAACTGAGGTATCTGCACTGTTGGG
CCGTATGCCTTCAGCGGTAGGTTATCAGCCAACGCTAGCGGAAGAGATGG
GTGTTCTTCAGGAACGTATCACCTCGACCAAGACGGGTTCAATCACGTCT
ATCCAAGCGGTATACGTACCTGCGGATGACTTGACTGATCCATCTCCAGC
GACCACGTTTGCTCACTTGGATGCAACAGTTGTACTTTCACGTGATATCG
CATCTTTGGGTATCTACCCAGCGGTAGATCCACTGGATTCAACTAGCCGT
CAGCTTGACCCACTCGTTGTTGGTCAAGAGCACTACGACACTGCACGTTC
TGTACAGAACACCCTGCAGCGCTATAAAGAATTGCGTGACATCATCGCGA
TCTTGGGTATGGATGAGCTGTCTGAAGAAGACAAAATGCTCGTCTACCGT
GCTCGTAAGATTCAGCGCTTCTTGTCTCAGCCTTTCTTTGTTGCCGAGGT
TTTCACCGGAGCTCCAGGTAAGTACGTATCCCTTAAGGACACCATCAAGG
CGTTCCAAGGTATCGTTGCAGGCGATTACGACGACCTTCCCGAACAAGCC
TTCTATATGGTTGGCTCTATCGACGAAGCCGTGGAGCGCGCCAAGAGCAT
GTAA back to top
|
