maker-scaffold201_size263271-snap-gene-1.23-mRNA-1, maker-scaffold201_size263271-snap-gene-1.23-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1
Unique Name	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold201_size263271	supercontig	scaffold201_size263271:166184..177565 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
sodium potassium calcium exchanger 3-like isoform x1	maker-scaffold201_size263271-snap-gene-1.23	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:31	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:31	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:32	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:32	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:33	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:33	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:34	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:34	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:35	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:exon:35	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:five_prime_utr	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:five_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:five_prime_utr	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:five_prime_utr-2005005	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds-2005007	Tigriopus kingsejongensis	exon
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds	maker-scaffold201_size263271-snap-gene-1.23-mRNA-1:cds-2005008	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2005009	auto2005009	Tigriopus kingsejongensis	polypeptide
Tk08041	Tk08041	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold201_size263271:166184..177565+

protein sequence of Tk08041

>Tk08041 ID=Tk08041|Name=Tk08041|organism=Tigriopus kingsejongensis|type=polypeptide|length=511bp
MESSCTKQAVLRRRVIASLVFLCISYVKSANSTTESANAGSADFNGRDQP
ANCTQPAIEEFPRDFFSQSQRIDGGVVVHVLIALYLIVGLGTICDDFFVP
VLEILCQKLHLKPDVAGATFMAAGTSSPEFFANIMGTFVTESDLGIGTIV
GSAVFNIFGVIAVCGLFSGRKIPLDWYPITRDCVIYGLTVVILIVVLIDE
AVYWYESLLMIIAYLGYILLMVFNEGIESWSHRAKKTVKTKVFPMLPNES
TPLHSANPNVHVESKGVQTTSPEVLESDPTLMTDEDSVDGMDDAQKPWER
PSKGGIWRTSWWILFFPVNFVFFVTIPDVRYPKCAKLYPLSFLMCMVWIG
VISYVLTWMITIIGFTLAIPDSVMGLSFLAVGTSVPEVISSLIVCRQGKG
SMAVSNSIGSNTFDILLCLGLPWLIKALYQGFAEGAEWFIQVKSEGLAYT
VISLLLSLILLYVILLASRFVLSRTLGFVCLVIYAIFLTISLLFEMNVFF
LVNLPSCQSNY

mRNA from alignment at scaffold201_size263271:166184..177565+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold201_size263271-snap-gene-1.23-mRNA-1 ID=maker-scaffold201_size263271-snap-gene-1.23-mRNA-1|Name=maker-scaffold201_size263271-snap-gene-1.23-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=11382bp|location=Sequence derived from alignment at scaffold201_size263271:166184..177565+ (Tigriopus kingsejongensis)
AGAGAATGCATGCAGTAAATACCGAACCCCATCCGAATAGAGTTCGGAAA
CCTGTCGCATCAGCTGAGTGCAAGTGCTCAACATGCTCAATCATCGAAAC
CAATCATAAATACACGTTTCTCTCAACACCGACTTAAACTTGACTTTTAA
CTTGGGGGTACGTTCTATTTTTGTCCGCTTGTGTATCGCGAAAATATCCC
GAGTGGAAGTGATGCGATATCCACTTCACGTGCCATTTAAAGGATTTTCC
GCCCTCAGGCTCTCTTTTGGGCGGGCCCATGGAGAAATTGATACCCAGAC
TGTGATAACTTGGTTGTCCCACCTGTGGAACTCATTGACCATGGTCTGGG
CAGCATTCCAACTAAAGCCACTGGACCGCGGGTAGTTTGACTACGATGAG
GGCTGGAGTTCGAGGCCAGTCCCCAGGCCGGATGATCAAATATTCAAATT
CCCTCTCCACTTAGCCTGAGGGAGTCCTCGACTGTTTCCCCTCCTATCCC
CAAGCGACGGACAGTTGTGTCCTGGAGTAATTTCCATCCGATAGTGCACT
ACCACCACCACTCCATGAGCTCGTCTCGTTCGTAAAGGGCACCAAGGGCC
GTTAGTCCATCGGCGCTTCTCTGCTGGCTCGGATCGGTCGCGGTAACTCT
TCGAACGTCAGCAACGGCGGACTTATCGGCCACGAGTCGGGAGCTTAGAA
GGCTGGCTTGTTGCTTTACACAGAAACTCCTCTGCTTGTTGTAAGAGTAC
TCAAATGTGAAGCTTGGACTCTCTTTTATCAGGGGAACCACAACAATTTG
TGTTCTCTTTCCACTCGGTAATGCCTGTCAGTGATGTAAAGCAAACAATC
GAAGCATCCCAGAGGTCACTGAGCAATCCTATGTTGGAGCCAAAGATACC
CCCTCTGGTTGGGTAGGATTTGTGTGACTGACGAACTCTTTCTACTTACA
GTTGAACAACCCAGTGCAGCTCTGAAATGGAGTCCAGCTGCACTAAGCAA
GCTGTGCTCCGGCGGCGGGTGATTGCGTCCCTGGTATTTTTGTGCATTTC
CTATGTCAAGTCCGCCAATTCTACTACAGAATCAGCTAATGCAGGTTCAG
CTGATTTCAACGGCCGCGATCAACCGGCCAATTGTACTCAACCGGCTATC
GAGGAGTTCCCCAGGGACTTCTTCTCTCAAAGCCAGCGGATCGATGGCGG
CGTGGTAGTCCATGTGCTCATTGCTCTCTACCTCATTGTGGGTCTGGGCA
CGATATGCGACGACTTTTTCGTTCCCGTCCTCGAGATTCTGTGCCAAAAA
CTTCACCTGAAGCCCGATGTCGCCGGAGCCACATTCATGGCAGCGGGTAA
GTTGCCATCTCAAACGCAATAAACTATTCAGGCAACCAATGTTTATGGCT
GTGATAACTAAAAAGGGACATTTCATGCGAATATAACCTACCAAGTTTGG
AATAACTATACATCAAATTAAGGAGGTCATCCATGCTATAACATGACATT
CATCGCATCGTAACCAATCATGAATCACATAAGTAGTACGTTTCATGTCC
GTCTTATTGTCGTTTCGACTACTTAAAAGTGAAAAAACAAGGTTACTCAT
AGTTAACGGCTCATTTTAACAGTAAAAAACACCGGATGAATTTTTCTTGA
ACTGGGACGGATTTTCGTTTGTTAAACTTCCCACACTCATGTAAAGTATA
GACTTTGCTGGACTCTTCACTTTAAAAGCACCGAAATATCGCCCGAATGC
CCGAAAATACGATACCATTTATGTTAACTACTTGATATGTGTACGTAGGT
GGAAAAACCCGGTTGCCTTGTCTGGGATTAACATTTTATAGACTAAACCT
CGTGTCTTCGACAAAAATACCTTTTTATGAATTGAGGGACTTTGAGTCTG
CCATTTTGCACGTTTTAAGGACTTAATTTTGTCTTTGCCCCCAAATGATT
GGTCTGAAAATGGGAATATATCACCTGAACACATGGAATATTACTCAATT
GAAGCCTTTGGCCTCTTCTGACCCTAGCTTGAGCTAGAGCCACTAAAAGT
GTCTCTAGTTACCAGTGTCTCTAGCTTGAGCTAGTGGTTGACTCACGAGG
TGTAGAGATTGACGTTCTGTTTGTAGAGTGCTGAATCAGCCCTCAAGATA
CTAGCTGAGGCTCGTGATCTTGATATACATGGTAGATTTGGTCGAGGTGA
TTGCACCCAAACTGCAAAATGGAACCAGGCCCTCACTGTAAGAGGATCAC
TAAATCTACTCAGAACTTTGTCAACCACTGAAGGAGTGCAAGTTTTAATT
GTTCCTCGAATGTCACGCTTGGTGTTGCCTAAAGCACAGCTAATTGAAAT
AAGCGCTAATCGATAATTCTTAAAAGAAATCGTGAGTTTGTCGATTATGG
ATAAATTTAGTGGAAAAATGAGCCAGTATAGGGCCAAAGAAAAAGATAAT
GGTGTTGAATTGGTAGGTGCCTTACGTTGTTGAAACAACTGCCATCCAAA
AGATGCCTTCAATTATTAATTTTGATCCCAACTGAATTCACTTTTTAACA
AAGCAAACTCTTTTCCCTACTACTGGAATAGATCCGATTCAAGGTTCTGA
AGTTTCTCTTTCCAACTTTTAGGGACAAGCTCTCCTGAGTTTTTCGCCAA
CATCATGGGAACATTTGTGACAGAGAGCGATCTGGGGATTGGGACCATCG
TAGGATCTGCAGTATTCAACATTTTCGGAGTCATCGCTGTCTGTGGTCTG
TTTTCCGGGCGGAAAATTCCTCTGGATTGGTGAGTCCACTCAAAGATGGT
CCTGATTGTGAAACCTTTTGACTGATGTCCTCCCTAAACCTCCCCGCAGG
TACCCCATTACTCGAGATTGTGTCATCTACGGGCTGACCGTGGTCATTCT
AATCGTGGTACTCATTGACGAGGCCGTCTATTGGTACGAGAGCCTCCTCA
TGATCATTGCTTACCTGGGCTACATTCTCCTAATGGTCTTCAATGAAGGC
ATCGAGAGCTGGTCTCACCGAGCCAAGAAGACCGTGAAGACAAAAGTGTT
CCCAATGCTGCCCAATGAGAGCACGCCCCTGCATTCAGCCAATCCCAATG
TTCATGTCGAGTCCAAAGGAGTACAAACCACCTCTCCAGAAGTTCTGGAG
TCGGATCCAACCCTCATGACTGACGAAGACTCCGTGGACGGCATGGATGA
TGCCCAAAAACCGTGGGAGCGACCCTCCAAAGGCGGGATTTGGAGTAAGT
AGAAGGTTTTAACGATGGCATGATAAACAGATGAGCCACCCAGCCCTGAT
GAAGCCCACGGCCAAATTAGCTATAGCGTTATCTGGGAGTCGTTGGTTCG
ATCTCCTGGCTAATCAATATCATATCCGGCCGCTAGGTTTTTGATACATA
GCACCTGATTGATTGCCTTGCCGATGCTAAATAATAACACTGATCGTTCC
TTGAGGGTAAGGTAAAAAAGGGTTTGGAAAAAGGTAAAAATCAAAGTTTC
CCCCTTTCAATCTGAAGGGAGAATTCGCATGATTCATGATCCAAAATATC
TGTTTTGACGTGTTCAGCATATTTAGTACGATTAGGAGCGTCAAAGGTAG
GGGAACATTAATTGGCACAAATACAACTTGAAATCGCCTAGTTGGTGTAA
TTATCGCCAAGCCTTGGTAGCCCTAAACCAAAGAATGTGCCAAAATATTA
CGCACAATTCAATCAAGGGTTGCTATTGGGCACCAGAATTAAAATTGATT
CATTACCAAAAAATAAAATAAATTTAAAATAAATGATAAGAAAAATATTG
AGTGGTACAGAATAGCGACGCAGTTCACAATTGTATTCACCTTACAAACT
GTTTTGGGAAGGAAACGAGATCCCAAACGTTTGTTCTTACGAGCCTTGTA
ATTACATATATCGTTTGAACAACTGTTTAATATTTCAAAAAGATTAGCGA
AGCTATGGATTGTGCATGAACTCCATTGGTTAGAACAAAAAAATGTAAAT
TCCCCCTCTGCTGTAAGCACACTATTCCTTTTGAATTATTACTTTGCCAT
GTACGTAGGCAAGGTATTAGTTGCTACTACTTGGCATCAAAATCGATAAC
TGTTTGTACTCGTACTTGCTGTATACCTTTGTGCTCGTTCCGGCAGCATC
TGGAAGGAAATATTGACAATCTATATTTTTACCAAGCAAAATATGCTTGT
TGCAATGAAAAAGGAGAAAGTTCTTTCCTGCGCAGGACAATTGTGTTTGC
CTTAAACAAATTGAAGCCCACGCCTTATAACTGGTTTGTTGACTCGTTTT
CATTTATTCCCTCACTTTGAACCAACCATGAAAGCTGAAATTATTATTCT
CCGATGGGATTTCCAAATTAACCTTAGATCTGTTTAGCACTGTTTTTGAA
ATCTCCCTAAAATACAGCTTATTAGAATATCGAAAGGAGAATCGTCTCAT
AAGATACGCACTCTTATGCCTAATTGCGCAATCAGTGTTTTCAACGGTGC
TAAACCTCATTCAGAGTGTAAGTAAAGCCCATTGTGGCTCTAATGCGATT
AAGGACTAAATCGCTTTAGAGAGTTTTGCCCGGAATATGAGAGTACGAGC
CTAAACCCTGTAATACGTGTCCAAGCAAGCATCACTAATGACCTCGCACT
GAAGTGCCATTATGAGGGAGATTTAGGATCCCAATGAAAGTCAGTTTTTG
CAAAGTTTCAGCTTTCAGCTACCTGCATTCAGCGACAGCAATACATGCGT
TTAATCATGGAACCCTGTACACATTGAACAATTACACTGGGCAGACTTGC
GGGCAACGTCAAAAGTGACCAGATTTTCAAATAAGAAATACAGATGCATT
CAGCACAAAATTGGTTGGAAAAGTAGATAATCACGACTAATGCAGCATTA
ATAGGCTGAACATGGCCAGACTGACATCGCTGAGAGCTTCTCGTCGAAGA
GCCCAGATTCAGCAATATGATCTGACATTCGTTTTCGTTATTGGAAACTT
AGAGCAGTTCGAGCTGATTAATGGTGGATTTTCATTCTGAAAATTTGTAC
ACTTTTGAGTTTGGACCTGAAATAACCGGTCTCTCAATGTCCATAGTATT
AACCTAGTGTATTTCCGTTTAAGAATTTATGTTATTAACATAATTTGTGG
TGTATGAATAGGGGTTACTGACCCTGCAGGGCAGGAGCGTCCGAAGGTGA
GGAACGTGGGTCCGGTAGAGGTTCCGACTAATCCCCGAGATCAAGATGTC
TGAAGCCTTTATAGCGGCTGTCGTTGCTCGGGGAGCAAGCAGATGATTGG
AGGCAAGGTGCAGGGGAGTCACGATGATTCAGGACCTAAGTCTGGCAATG
TTCAACCGTGGGTAATGCTTCCAGATGTACAAGGTACCGGGGTTTAATGC
ACCCAAACTCCTTAACCTTGACAACAAAGAGTTATTAAAGTCGTTGCCGA
GATTAATCGGATATCAGCGGTTTTCCCACATTCACTCAAAGTGACCAGAC
AGATGATGGAAATGACGCCATCATTTGCTGATGGGCCTTAATCTAGGTTT
TGGGGACCAATAAAGATAAATCTTTTGAATTCGCCGCCTTCAAGTGGAAG
ACTGCCAATAATTGGAGCCAGGCCTGCCAGATTGGCCTAAATTATGGTTG
CAGTCTTCTGCTTCGTCTGTGTCAGAAATTCTAGCAGATTACACGGACAA
GTCTGGCAACAAAGTACAAATTAATTTCGCCTAGTTGAGTTATAAATCCA
TATTTTCGAGACATCTAAGATGAAAACCTATCGGAACAAAACCAAGTGAT
CGCATTTGTTCCATGGTCCTGTTCTCGGTCCTTTTAAGCCAATTAGGAAG
TACATCAGTCTACATCTGATAAGTTTATGCCAATACTTCGAGAAGTGCAC
TAGTTGATTTGATCACTTCGAGTCGAGTTTGGTTCGTCAAGCTGACAAGA
CCTATTTTTTGCGTCTCCCACTGATTACAGTAGATCAATATCTGATTGAT
CAGAGGATGGTGCTTTTTGAGCTGAGAAGCCCAAAAGAACCCGACGTCTG
CAGCACCACAGCAACGGACTGGTTTAAATAAAATTGCCCGGGTGATATTT
CCGACTGTGTCCGGCTCCTTTGCGAGGGCCGCAGTGTCAACCATGTGAAC
AAGCCCGTCTTGGTTGAGTCCCTACGCTTCGTCCTCCGGAGCCTCAACCC
AGCTATCCCGACGCACCCCTCACCCCCTGGTTCTCTGCCCGTGGTGGAGG
CTGTAGTTGGACATAAGGACGACGACCTTAGTGAAGAAGTTCTCGTCACT
ACCTCTCCTACGGAAGCCCCCTAATGCCCAAGACGCCATCCCATTGGCCG
GGGCCTGGACCAAGGTTAAAGGGAAGCAACGGGTCTGCAAGTCCCGTTAT
AGTGGTAACCTGGAATGCAAAATAAACCTGTGTAGCTTCGCTCACCCCCC
TCTCTGGCTGACACTGCCTGACTTGCAAAAAGAAGCCCAGCATGCAAATT
GTGGCATTTTGCACATCCCAAAGCAAAATCCCAGTGGCGTTCCAACTCGG
GAAACGGCTCCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNGGGAGACTTGCACACCACTTGCCACGAGGACAGTACTTGCACCAAC
TGGCCCGGGGACTAGTCCTGGGGAAGGTTGGGTATGCTGCGGCTGCCATT
GCATCTCCTCGCCTCTCGGAAGCCGACGAACCTTCCTCCAAAGCCTACAA
AGCTGTCCAAGTGGCCATCAACGACGTGGCCCGAACCTTAACTGGCAAGA
AAAGGAAGGATCGGATCAGAACAACGGACCTACTCAACCTGGCTGGTCTC
CCTTCCATGAACGAGCTCGCCGTCAGGGCAATAGCCCTAGAAACCTGGAA
GGCCTTCCATAGCTCGGACGGCGAGAATGGTGGCCGAAACCCTATTGGAA
ACATCATCTTCCCCCCCGGTCCCGGACGGCAGCGGGTTTGGCAGAACCAC
AACCAGGTTCAAGGCAGCTGGCATGATGGTCCCTCTCCGCCAGACCACCA
ACACTTTCGCCGTCCATGCGTCCACCATGTGGAACAAGTTCCCTGAACTT
AGAACGGCCACAACCATCAGGGCTGCTTCTACAGTGGCGAAGAAAATCAG
TCAGAATGTTCCCATCTAGTCGGGCATTTACAAAAAGTTTGCGTCCTTCT
ATTTTTTTATTACTTTTTAACGGTACACATGACTAGTACAATGTACTAAG
TGCCACTCTGTTTGTTAGCCGTATTTTTGTTAAATACAATCCCGATTACA
CACTCTAACACATTTTTGTCTCCTTGATTGCCTAGTAGCCCGTGTCCTTG
AATTTCAATGCATAGTTTGAAAAAGATGAAAATATTTGAAATACAGAGAT
ATATGGAGATTGAATGTGGTTGGAGACGGATTGTACGGGGCTGCACGGCG
ACCATCTAAATTAGCTAACACCATCAGTGGGCCCTGTGTTCACCATGGGG
GTTCCATGGTGTAGAACACGAAACCTCCGGAAGGTGCGATTACACACACA
CACTTGTACATCCTACCCACTTAAGGTATCTCATCATAGCACGCGTTCAT
AGTTCCAAAATCGCTTTACAATGTCAACCTTCATTTGCAGGGACTTCCTG
GTGGATCCTGTTTTTCCCCGTCAACTTCGTCTTCTTCGTGACGATACCGG
ATGTCCGATATCCGAAATGCGCCAAGCTCTATCCGCTATCCTTTTTGATG
TGTATGGTTTGGATCGGAGTCATTTCGTACGTGCTCACGTGGATGATCAC
CATCATCGGCTTCACTCTGGCCATTCCGGACTCGGTGATGGGCCTGAGCT
TCCTGGCAGTGGGCACATCCGTACCCGAGGTCATATCCAGCCTCATCGTG
TGCCGCCAAGGCAAAGGCTCGATGGCGGTCTCGAACAGCATTGGATCGAA
TACCTTCGATATCCTCCTCTGTCTGGGTCTGCCTTGGCTGATCAAGGCCC
TCTATCAGGGCTTCGCCGAAGGGGCTGAATGGTTCATTCAAGTCAAGTCG
GAGGGCTTGGCCTACACAGTCATCTCCCTGCTCTTGAGCTTAATTCTCCT
CTATGTTATCTTGTTGGCCTCTAGATTCGTCTTGTCTAGAACCCTCGGAT
TCGTCTGTTTGGTCATCTACGCCATATTTCTGACCATCTCACTCCTCTTT
GAGATGAACGTTTTCTTCTTGGTCAACCTTCCGTCGTGTCAAAGCAATTA
CTGAGGTTGACCAGCCGACAGATCTGCCTCCATTGGGCCGAGAGTTCATA
TTACACAAGTGCTATAGCTCTATTTTGGGTAACGAGAGACCACCTTATCA
ATACTTACTAGCAGTAGAAGTAGTTTCATTGTCAGAGAAATAAGGCAGTT
TATTCCAGTACAACCAAAGATTGTCAATGCGTGTACATATAAATACATAG
ACTAGAAATAAATGGCTGCTGCGTTTAGCAATGACTCGAACCCTCGACTT
TTATTGACACTTGGGCACCAAGTGACCGGGCA

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