Tk08041, Tk08041 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08041
Unique NameTk08041
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length511
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1420.30coord: 299..494
e-value: 2.5E-26
score: 94.4
coord: 111..234
e-value: 4.8E-27
score: 96.7
NoneNo IPR availablePANTHERPTHR10846:SF42ZYDECO, ISOFORM Fcoord: 50..508
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 396..406
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 475..494
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 370..374
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 446..468
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 375..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 495..511
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..426
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 427..445
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 469..474
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..369
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..94
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.545
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..29
score: 0.599
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..29
score: 0.622
NoneNo IPR availableTMHMMTMhelixcoord: 346..368
NoneNo IPR availableTMHMMTMhelixcoord: 445..467
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 480..502
NoneNo IPR availableTMHMMTMhelixcoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 403..425
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 338..492
e-value: 4.8E-27
score: 94.7
coord: 80..221
e-value: 7.9E-26
score: 90.7
IPR004481Sodium/potassium/calcium exchangerTIGRFAMTIGR00367TIGR00367coord: 78..487
e-value: 3.4E-71
score: 237.8
IPR004481Sodium/potassium/calcium exchangerPANTHERPTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERcoord: 50..508

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold201_size263271-snap-gene-1.23-mRNA-1maker-scaffold201_size263271-snap-gene-1.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08041 ID=Tk08041|Name=Tk08041|organism=Tigriopus kingsejongensis|type=polypeptide|length=511bp
MESSCTKQAVLRRRVIASLVFLCISYVKSANSTTESANAGSADFNGRDQP
ANCTQPAIEEFPRDFFSQSQRIDGGVVVHVLIALYLIVGLGTICDDFFVP
VLEILCQKLHLKPDVAGATFMAAGTSSPEFFANIMGTFVTESDLGIGTIV
GSAVFNIFGVIAVCGLFSGRKIPLDWYPITRDCVIYGLTVVILIVVLIDE
AVYWYESLLMIIAYLGYILLMVFNEGIESWSHRAKKTVKTKVFPMLPNES
TPLHSANPNVHVESKGVQTTSPEVLESDPTLMTDEDSVDGMDDAQKPWER
PSKGGIWRTSWWILFFPVNFVFFVTIPDVRYPKCAKLYPLSFLMCMVWIG
VISYVLTWMITIIGFTLAIPDSVMGLSFLAVGTSVPEVISSLIVCRQGKG
SMAVSNSIGSNTFDILLCLGLPWLIKALYQGFAEGAEWFIQVKSEGLAYT
VISLLLSLILLYVILLASRFVLSRTLGFVCLVIYAIFLTISLLFEMNVFF
LVNLPSCQSNY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb
IPR004481K/Na/Ca-exchanger
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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