maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1, maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2052_size21842-snap-gene-0.5-mRNA-1
Unique Namemaker-scaffold2052_size21842-snap-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2052_size21842supercontigscaffold2052_size21842:4766..5732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
low quality protein: enoyl- delta isomerase mitochondrialmaker-scaffold2052_size21842-snap-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:860maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:860Tigriopus kingsejongensisexon
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:861maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:861Tigriopus kingsejongensisexon
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:862maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:exon:862Tigriopus kingsejongensisexon
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:three_prime_utrmaker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:cdsmaker-scaffold2052_size21842-snap-gene-0.5-mRNA-1:cds-1955126Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1955127auto1955127Tigriopus kingsejongensispolypeptide
Tk06813Tk06813Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06813

>Tk06813 ID=Tk06813|Name=Tk06813|organism=Tigriopus kingsejongensis|type=polypeptide|length=176bp
LANFTEALEAPNATMSNVASEGAQLVQDVVEAFIACSKVLVAKVNGNAIG
IMVTLLGLFDLVYAVDTAQFLTPFVPLGQSPEGCSSLLFPNGAKSKGLVT
ETYLTAAFEAQVTQKIDQLANLPPQSLLATKRLISSTLTQDLRATNLRET
AELEQRFQSEESFEAILKFFTPNAMM
back to top

mRNA from alignment at scaffold2052_size21842:4766..5732-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1 ID=maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1|Name=maker-scaffold2052_size21842-snap-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=967bp|location=Sequence derived from alignment at scaffold2052_size21842:4766..5732- (Tigriopus kingsejongensis)
GCTCAGGATCCTACTTCTCGAGCGGCAATGACTTGGCCAACTTTACCGAA
GCTTTGGAGGCTCCCAATGCTACCATGTCCAATGTAGCCTCAGAAGGAGC
CCAACTTGTTCAGGATGTGGTCGAGGCCTTCATCGCCTGCTCCAAAGTCC
TGGTGGCCAAGGTCAATGGCAACGCCATTGGGATCATGGTCACACTTTTG
GGCCTCTTCGACTTGGTCTATGCCGTTGACACAGCCCAATTCCTGACCCC
CTTTGTTCCCTTGGGACAGTCCCCAGAGGGATGCTCATCCCTGCTCTTTC
CCAAGTATGCAGATAGCCATTGAATGTCTAGCCTGGACTACAAAAAAACC
CTGTCTTTCAAGGCTTTTGGGCCGAGGGGTGGCGCTAGAAATGTTTGCCC
TGAAAAGAGAGCTTTCAGCTGAAGTGGGGCCAAGTCCAAAGGTCTTGTGA
CAGAGACCTATTTGACTGCCGCTTTTGAGGCCCAAGTCACCCAGAAGATT
GACCAATTGGCCAACTTGCCCCCCCAGGTAAGGGATCAATTTAGGGTGGG
GACACCAAGGCCTAACCTCACGCCTCCCATTAGTCCCTCTTAGCCACCAA
GCGTTTGATCTCATCAACTCTCACCCAAGACTTGAGAGCCACCAACTTGA
GAGAAACCGCAGAGCTGGAACAGCGATTCCAGTCCGAAGAGTCCTTTGAA
GCCATCTTGAAGTTTTTCACTCCAAATGCCATGATGTAGTACTACACTCT
GCGTGAAACATACGCGTATAAACGTGTCGTACAAGCCCAGTAACCACCAT
CCACCAAACGAGAGCCGCTCAAGAGTGGCATTGCACACAAACATGCTAGA
AACTCTCCACGGAAAGGGCCAAGAAAACCTCTACCAAGGCATGGACGTCT
CAAAGGATCTATGGACTGATTTGTCCCATTTTGTCCCCTATAGACCAAGG
GTGGCCAAGCAACTGGC
back to top
Add to Basket