maker-scaffold221_size251850-snap-gene-0.12-mRNA-1, maker-scaffold221_size251850-snap-gene-0.12-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold221_size251850-snap-gene-0.12-mRNA-1
Unique Namemaker-scaffold221_size251850-snap-gene-0.12-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold221_size251850supercontigscaffold221_size251850:43891..51164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
cadherin-related family member 2maker-scaffold221_size251850-snap-gene-0.12Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:724maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:724Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:725maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:725Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:726maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:726Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:727maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:727Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:728maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:728Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:729maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:729Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:730maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:exon:730Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:five_prime_utrmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cds-1976151Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cds-1976152Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cds-1976153Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cds-1976154Tigriopus kingsejongensisexon
maker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cdsmaker-scaffold221_size251850-snap-gene-0.12-mRNA-1:cds-1976155Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976156auto1976156Tigriopus kingsejongensispolypeptide
Tk12496Tk12496Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12496

>Tk12496 ID=Tk12496|Name=Tk12496|organism=Tigriopus kingsejongensis|type=polypeptide|length=379bp
LNTLSYTKTGVQSLVLLIRVSGGTYWDYETIKDISFDLVVTPSGSTNEAD
EVVQNFNITLTDVNDNEPHFTKDEYLVKVREDLDGLKPSEDGVFTLFDGI
KALDSDASDSFGNKSIRYEMSSSIPLTIDPLTGVVTFTATNIFDYELRKS
FEISISVRDSITEDGTSLPGSLFGSSVLKIQVIDVNDEPPVFTSQPDQTF
CLYENETSMWLQDLCNGQDPRDFLFEANDQDLNPALKLEIDRNFTVARKD
NRVVNLKDYDYLAFINLVPQSSNINSISGVLKLAEDTWIDREKVDQLSLV
INVVDENTETGSRFSRSTMVIDIIDLDDSKPEFVNSESWKFEINEIEDGA
DFTPDEQVLIQRILVSDNDLSQEFTFSIE
back to top

mRNA from alignment at scaffold221_size251850:43891..51164+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold221_size251850-snap-gene-0.12-mRNA-1 ID=maker-scaffold221_size251850-snap-gene-0.12-mRNA-1|Name=maker-scaffold221_size251850-snap-gene-0.12-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7274bp|location=Sequence derived from alignment at scaffold221_size251850:43891..51164+ (Tigriopus kingsejongensis)
ACATGAAGACCAAGCTTTTCTGAACACCCTGTCCTACACAAAAACAGGTG
TCCAATCCCTGGTACTCCTTATCCGAGTGTCTGGCGGGACCTACTGGGAC
TATGAGACGATCAAGGACATCTCTTTTGACTTGGTTGTTACACCCAGTGG
GTCCACAAATGAGGCCGACGAGGTCGTTCAGAACTTCAACATCACCCTCA
CGGATGTCAACGACAACGAGCCACACTTCACCAAGGATGAATATCTCGTG
AAAGTGAGAGAGGATTTGGACGGTTTAAAGCCGTCAGAGGATGGTGTCTT
CACTCTCTTTGATGGGATTAAAGCCTTGGATTCCGATGCCTCCGACAGCT
TTGGCAACAAAAGTATCAGGTGACTAAAAATGAAACATCACGGCTTCGGC
AAATACTTTACTTATGTGTAGGCTGCACTGACGTATTTCGACTCGTTTTC
CTTTAACTTAACATGGCTCCAAGCTTTGTAGAAAGCGATTGGCCGCGGAA
TCCTCATGAATGGAGGCCGCCGCTTGACCTTTCTCGTCTCTAATAAATGT
AGCTCACAAACGACCTTCAAAGGTCAACTAGCAAGGTGGTCTATGTTCTA
TTTTTTTGGGCAATTGCTAGCTCCAATTCTAGATTCATAGACACGTTTAA
TCAAACTTGAAGGTCAAAAAAGGTTTGATCGCTTTTCAACCCTTTCAGTG
TTCAGGAACATGTACGTACTCGTACATAAAAGGGATCGGCCATAACTTTG
GGCAATAACCATTTGGATTAAAAGAGATTAAACAGACGTGGTCCGCTCTA
AATTGTCTTTCGTTGGTAATCTATTATGTAATGACTAAAATGTGGCAGAG
ACGTTGAAAATGGGAGACCATCTCGAAAAGGCCCATCAGCTCATCGTCTG
AGATTCCTGAACCACCCTCGAGCACTCCATGGGTTGTGTTACCTCTACCA
TAACTGCTGTGTGTCTTCAGTCTGATTCATTTTTTACAAATTTCGTGCTT
AGTCACTGGATCTTGGATAAAATCTTAAGAAATTTAAAAAAAGCATAACT
TCAAATTTTCAATTTTCGAATTTACCGTCTTCACAAAAAGGTTGTCCATG
TTTTTTGTTTAATTTTTATCTTATCACTTCTCTGGAACGATTTTTGGGAA
ATTGTGGCAAAACTGCTGATTTTTACCGCTTTTTATTAATTGTTTCCCTT
ATATGGTTTTCGGTCGTTTGTGACTTTCTCGCGTCGACGGTTAAAAAATA
GAGTAATGGAAGAAGGGATTACTATTCAATCATTAACCGAGTCCAACTTG
TCCAAGTTGATTTCTTGTAACTAATGATTAAACTGCACAGAAAAGAAAAT
TCAATTAATTACGTTAAAGCACACTAAATCGTGAACTATTATAGACAGAA
TGTCCACTTTTTTGTCACTTTAAGGACAGGTTCTTCTCATCACTCATTAA
AATATTGCAAAACCTTTGAAAGGAATGTGCTAGATACTCCAACAATAGAA
GTATTAAGTCAAGAGCCGACATGAGAGGTTGCAAAGCAATAATATAAACA
ACTCAACTTGCGTAAATGTACCTCTTTTGAAATGCAAATCCACGCCGTCA
AGTAAGGGTTTGATCGATGACACGCAAACTGAAAAGTGAGGTGAGAGAGC
GAGCGGAGCTTGGTAACACCAAGCCTTTGATCAAGTATTTAGGTAACACT
TGAGAGTCAACCCATCCGTACTTGACAGTAGGAACAAGAGGTAAATTTGC
GCAACCTGGATTGTTGATGTCATTGGTAAGCAACCTCTTATCTCGGCTCT
TGACTTAATACTCCTATGACACCAACATTATGCGGAATATTAACTCTCCT
TTCAGATATGAGATGTCATCGAGTATTCCACTCACGATTGATCCCCTAAC
CGGAGTGGTCACTTTCACCGCCACGAACATCTTCGATTACGAGCTTCGCA
AGTCCTTTGAGATCTCGGTACACTCGTTAGCCTTCACATTTGTTTGAATA
CAGTTTTGACTTGCAAATATTTTATACCAGATCTCCGTACGGGACAGTAT
CACAGAAGATGGCACTTCCTTACCTGGATCCCTATTTGGATCATCCGTGC
TCAAGATCCAGGTTATCGACGTAAACGACGAACCTCCAGTTTTCACCTCT
CAGCCAGACCAGGTACTGACTACAGAGTCTTCATTTTGACCGTAGAGTAA
AACATTAACCTTCAATGCACTGTTCTAGACATTCTGCTTGTACGAAAATG
AAACCTCTATGTGGTTACAAGATCTTTGTAATGGGCAAGATCCGCGTGAC
TTCCTTTTTGAGGCCAACGATCAGGATTTGAACCCAGCCTTGAAGTTGGA
GATAGATCGGAATTTTACGGTGGCGAGGTAAGTGCCTTTTGAATTACATC
GTGGAACAATTCCAAAATTTTGAACTTTTGATATCAATAGAGAAATTGCC
TTGTTTCTTAGTTCTAAAAAAAGACTCAGGGATGCCAAAGTGCATTTTTA
TTTAAATATGCTTGTGGACAGCAACACTGAAAATATATACAGTGTGGCGT
CCCTGCGAGCCAGTTCTGCGTAACCGGTATGCTCGCAGGGCGCCAGCTTT
TATATACGTTTTCCCGCCCCGAAATAATTCAGTCTTCCGCCATCTCTCGA
CTCCGATGGAGCAACGCCATTGCGTACTCCACATCGGTGACCCCGACGTG
ATGTCTACCCGCCCGGTCCTTCGAGGCCTGCCACCCCGCCCGCAGCTAAA
GCCTTCGAGGCCTGCCACAACCTACTCAACATTGGTGACCCCGACGGGGC
AGACCAACAGTCTGCCCCACACGCAGCCCGGTCGCGGCTCATGACACGCC
TGTCACCGTGGCCGGGCTTTGCCCTCATCGTGGCCCTCGCCAACCAAGGC
GCCCTGCCACAACCAATCCCCCGGCAGCTAAAGCCTTCGAGGCCTGCCAC
AACCTACTCCGCAGCTGAAGTCTTCGAGGCCTGCCACAACCTACTCCGCA
GCTAAAGCCTTCGAGGCCTGCCACAACCTCTTAAGCGTCCCCTGAGGCCG
GGTACTCCATGGCGTCCCCTGAGACCACGTCCATGGCGCCCGAGGCCCGA
GTCCATGGCGTTGAGGCCAAAGTTTCGTGGCTCTCTCCACTATCGTGGAT
CCCTCCACCGTCGTGGATCTCGCCCCCTTCGTGGCCCTTTCCACCATTGT
GGATCTCTCTTAAGCGTCCCCTGAGGCCGGGCACTCCATGGCGTCCCCTG
AGACCATGTCCATGGCGCCCGAGGCCCGAGTCCATGGCGTTGAGGCCAAA
GTTTCGTGGCCCTCTCGCCCGTCGGGGATCTCTCCACCGCTGTGGCCCTC
CCCACCGTCGTGGATCTCGCCCCCTTCGTGGCCAACTGCCGGCCATCGGC
CTATTGAGCGTCCCCTGAGACCAGGCTCTCTTGAGCGTCCCCTGAGGCCG
GGTACTCCATGGTGTCCCCTGAGACCATGTCCATGGCGCCCGAGGCCCGA
GTCTATGGCGTTGAGGCCAATGTCCAATGCGTCAAGTCTCTCCTGTTGGC
TCTTGAGCGTCCCCTGAGGCCGGCTACTCCATGGCGTCCCCTGAGGCAAT
CTCCATGGCGCCCGAGGCCTGAGTCTATGGCGTCAAGCCCCAGGTTGGCC
CTCTCCGCCGTTGTGGCCCTCTCCCCCATCGTGACCATCAGCACGGTGGA
CCTCAATCTCCTCTCAGCCGCCCCGGATGGCCTAGCACTTCCGGGGTCAA
TCTGTGTCTGCCACCCTTCTACCCGGCCTCCAATTGAGGACGGCTCAATT
TTTTTTTCTCTTTCCTCGAACCCCCAAGCCTTCGAGAATTCGGGCCAACT
GTCCTATCTATGTGTTATTCCGGGGTCTGGGGGGGAGTTGTGTGGCGTTC
CTGCGAGCCGGTTCTGCGTAACCGGTATGCTCGCAGGGCGCCAGCTTATA
TATACGTTTTCCCGCCCCGAAATAATTCAGTCTTCCGCCATCTCTCGACT
CCGATGGAGCAACGCCATTGCGTACTCCACAACAGTATGCTAATAATTTG
ATCACGGAAATTTTCGGTGCTTTGACGAGGGCTGCTAGGTCTGGTGATGT
TATAACGTTATGTTATTTAACATAGCAAAATTCCTTTAGGTTACAAATAT
TGCTTTCAGTTGTTCATGTTATTCAACTCAATACTGCCATATTAATTATT
TTTGTGATGACGTATTCACCAATGTTGAAGTAACACAGATTACCCTTTTA
AACGTTAATAGACTTCTTGGCACACTTACAATTTAGGTGTCTATTTAGTA
TACCATGTTTTAAAGTTGTTTGAGTGATTGGTGATAAATGGGGGACGACT
GTATGCGTTCATGAAAGAATGCTTCCAAGTTCAAGATGAAACATCAAGAT
GTGGTGCTGCAGCTAGAGTAATCCGAGCGTTGTTTACTTCGATTAGCGTT
GTATACTTCGATTAGCGTTGTAGCTAGCTTAACTCGAGCGCACTTTACTT
CGATTAGCGCTGCGGCTAGCTTAATGCGAGCGTAGTTTGCCTAGATTAAC
GCTGAGGCTAGCTTAATGCGAGCGTAGTTTACCTAAATTAACGCTGCGGC
TAGCTTAATGCGAGCGTAGGTTACCTAGATTAACGCTGCGGCAAAATTCA
TGTGCGCGTAGTTTACCTAGATTAACGCTGCGGCAAGCTTCATGTGCGCG
TAGTTTACCTAAATTAACGTTGCGGCAAGCTTTATGTGCGCGTAGTTTAC
CTAGATTAACGCTGCGGCTAGCTTAATGCGAGCGTAGTTTGCCTAGATTA
ACGCTGAGGCTAGCTTAAAGCGAGCGTAGTTTACCTAAATTAACGCTGCG
GCTAGCTTAATGCGAGCGTAGGTTACCTAGATTAACGCTGCGGCAAGCTT
TATGTGCGCGTAGTTTACCTAGATTAACGCTGCGGCAAGCTTCATGTGCG
CGTAGTTTACCTAGATTAACGCTGCGGCAAGCTTCATGTGCGCGTAGTTT
ACCTAGATTAACGCTGCGGCAAGCTTCATGTGCGCGTAGTTTACCTAAAT
TAACGTTGCGGCAAGCTTTATGTGCGCGTAGTTTACCTAGATTAACGCTG
CAGCTAGCTTAACTCCAGCGCAATTTATTTCGGTTAGCGCTGTGGCTAGC
TTAATGCGAGCGTAGGTTACCTAGATTAACGCTGCAGCAAGCTTCATGTG
CGCGTAGTTTACCTAAATTAACGTTGCGGCAAGCTTTATGTGCGCGTAGT
TTACCTAGATTAACGCTGCAGCTAGCTTAACTCCAGCGCAATTTATTTCG
GTTAGCGCTGTGTCTAGCTTAATGCGAGCGTAGGTTACCTAGATTAACGC
TGTGGCAAGCTTCATGTGCGCGTAGTTTACCTAAATTAACGTTGCGGCAA
GCTTTATGTGCGCGTAGTTTACCTAGATTAACGCTGCAGCTAGCTTAACT
CCAGCGCAATTTATTTCGGTTAGCGCTGTGGCTAGCTTAATGCGAGCGTA
GGTTACCTAGATTAACGCTGCAGCTAGAGTAATTCGAGCGTTGTTTACTT
ACACGCTGCAGCTAGCTTAATGCGAGCCTAGTTTGGCTAAATTAACGCTG
CAGCTAGCTTAATGCGAGCGTAGCTTGCCTAGATTAACGCTGCGGCTAGG
GACACTCGAGCGTAGCTTACTTAGACTAGTGCTGCGGCTAGGATAACTCG
AGCGTTGTTTACATAGTGTTAGGGTTAGTTCTGATGTTAAAGTGCTTGGG
CGCACGACCCCCCTCCACTACCTTTACCGAAATCGGCGTCCTCCGGGCCA
TCTTTGTTCGCCCAAATGTACTCATCTCTTTCTCTCTCTCAGGAAAGATA
ACCGGGTTGTGAACCTGAAGGACTACGACTATTTGGCTTTCATCAATCTC
GTCCCACAATCCTCTAATATCAACAGCATCTCGGGTGTTCTAAAACTTGG
TATCAGAGTCCTTTTGTGCAGCATACTACGAATTGACTCGTCTGAAAAAA
ATATGTTCCTCCTCTAGCCGAAGATACTTGGATTGATAGGGAAAAAGTGG
ACCAACTCTCTTTGGTGATTAACGTCGTGGATGAAAACACAGAGACGGGA
AGCAGATTTAGTCGATGTAAGTTAAAAAGGAACTTTTTTCCAGAAGTTGG
ACCAACCATAATTAAATGTTACTACCACAGGGCGAAAAAAGGCAAGAATC
AAGCGAAAACTTTTTGTTTATCTGTTGTGAGCGGTTTTGGCGAAGACTTA
GATCAAATTAGTTTTTTCGCCCCAATTCCATGAAAATGACCCACAGTAGA
GTTGAAGGAATACACATAAAAATATTATATGAATGTACATATTTCCCAAA
AGTCTAAAAGTTGGAGGTGAATTTACGATGCAAATAGGGTCAGATTCCTT
TTCCGTATACTTTCCCCTTCAGGGATTTATTTAAGTGCTTGATTCGCATT
GTATTTTTTTTATTTTGAAACGTGTTCATGTCGGCCAAGGTTTTGTCATT
AGATGGCATTTGGTTAATTCATTTTTCCAGTATACTTGGCCGACATACTC
AGAGGCACAATGTTGAGAATCTTGCGAAATTTCATTGAAATCTGGCAGCT
CAACTCCCCAAAACATGTTGTCAAGGGGTTAAAACCAAAATTGGATTATT
GGAGAGCATAAAGTTGGTTGAAATGGTCGAAAAAAGCACCCGATTATCGG
TTATTTCAGCCTCTTTTCCCCTGTGTAAAGGGCATTAATAAACATGTGAG
GGTGAGATTTTGGCAGAAATATTTCGTCCTTATCGTTCCTTTACCCACTT
TGGAAAACTCAAACCGATATTGCTTGCAATTGAACACCAAAAACCAGTTC
GGGACCGAAGGACATTTCTTAGTCGTATTATATTGAAAGGTTAGATAATT
GGGTACACACAGAGGTAATCTCAAGCCAATTTTTTGGTGTCACTTTGGAC
GCAATTGTTCTAGCTCAGTAAAACTTCGAGCCTCCGGAGAGAAACTGGCT
GATTTGACAATGAAACTGGTTCCTGGCACATTTGAGCCCCAGAGTTCAAT
TGGGCTGAATTGTGGATCTCTTCCTACTCGTTCTAGCCACCATGGTGATT
GACATCATTGATCTGGATGACTCCAAACCAGAGTTTGTCAACTCGGAGAG
CTGGAAGTTTGAAATCAACGAGATTGAAGACGGAGCTGATTTCACGCCTG
ATGAGCAAGTGCTCATCCAAAGGATCTTGGTTTCGGACAACGACTTGAGT
CAAGAATTCACCTTTTCCATCGAG
back to top
Add to Basket