maker-scaffold229_size244821-snap-gene-1.11-mRNA-1, maker-scaffold229_size244821-snap-gene-1.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold229_size244821-snap-gene-1.11-mRNA-1
Unique Namemaker-scaffold229_size244821-snap-gene-1.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold229_size244821supercontigscaffold229_size244821:152808..156131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
sodium potassium calcium exchanger mitochondrial-likemaker-scaffold229_size244821-snap-gene-1.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1422maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1422Tigriopus kingsejongensisexon
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1423maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1423Tigriopus kingsejongensisexon
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1424maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:exon:1424Tigriopus kingsejongensisexon
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:five_prime_utrmaker-scaffold229_size244821-snap-gene-1.11-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:cdsmaker-scaffold229_size244821-snap-gene-1.11-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1:cdsmaker-scaffold229_size244821-snap-gene-1.11-mRNA-1:cds-2003275Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2003276auto2003276Tigriopus kingsejongensispolypeptide
Tk01403Tk01403Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01403

>Tk01403 ID=Tk01403|Name=Tk01403|organism=Tigriopus kingsejongensis|type=polypeptide|length=591bp
LQGRSLDVVTELECSLETPFAMFHSHRDCDFVHHINSSAAQCAFVQANPD
CQADGGFIDYIDIYFCIFSSYKYLAILAFVTGLLILFISLATTADDFFCP
NLAVIAKTLRLSQNVAGVTIMAFGNGAPDIFSSLAGISQSRPELVIGELF
GAGIFVTTVVSGAICITKPFKLMERPFLRDIIFYLGAGFWAFWIFYRGHI
DLYDSLGFLALYVFYILVVVIGRAIHQRQRRSAELLVQQSSEEEPSSELP
SNDDGLNIFTPNAILADEAQPITESDEIDGEEVTDEEVLIRSTSSPTLNN
INGSDPELNVRSPWKQLFQAIVPWDGSILASPTTSSLRKMWEVTKSPVVF
LLNLTIPILNEDLHQMGWCQYLVVLQCLIAPQFAVFATSMAFFTVYESIV
LWHLMIVLGQTLAIFILCTSVPFKPPIYHTFLSYVGFFTAVIWIYLIANE
IVSLLKTFGVLFGLSDAILGLTVLAWGNSIGDLIADTSIARQGYPRMGYS
ACFGGPLFNHLLGIGIPFTKVILEGDGRPVLLNFTPMIFVLAGSLAVALL
TSLIMMPLSRFRATRRHGFFLIFVYLVLLTVALTVEFTVIF
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mRNA from alignment at scaffold229_size244821:152808..156131+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold229_size244821-snap-gene-1.11-mRNA-1 ID=maker-scaffold229_size244821-snap-gene-1.11-mRNA-1|Name=maker-scaffold229_size244821-snap-gene-1.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3324bp|location=Sequence derived from alignment at scaffold229_size244821:152808..156131+ (Tigriopus kingsejongensis)
AAAGCATTGATCAGCTGAGTTTCCTCGCATTGACTCACCTGGAGGAAATC
AGTCGAAGGATGAAAAAAGGCCCAAAGCCTGGCTAAGTCCGTTTCACCCA
TACAGTAGTGGGTTGCAAGGCCGATCCTTGGATGTCGTCACCGAGTTAGA
ATGCAGTCTTGAGACTCCATTTGCCATGTTTCATAGCCACCGTGACTGTG
ATTTCGTTCATCACATCAACTCCAGTGCCGCTCAGTGTGCCTTCGTCCAG
GCCAATCCGGATTGCCAGGCCGATGGCGGGTTCATCGACTACATCGACAT
ATACTTCTGCATCTTCAGCTCCTACAAGTATTTGGCCATCTTGGCCTTCG
TGACCGGCCTTCTCATCCTTTTTATCTCTTTGGCCACGACGGCCGATGAC
TTCTTCTGCCCCAACTTGGCCGTCATCGCCAAAACTTTGCGGTAGAGTCA
TTGAAAATTCATTGTTTCCGCAAAACACCTGTTGTTCCTATTACTCTCAG
GATCTGTTTTAGACCTTAATCAATTTAATTGGATCTCTATTTTTCAGACT
TTCGCAAAATGTGGCCGGAGTGACCATCATGGCCTTTGGGAATGGAGCCC
CCGATATATTCTCATCCCTGGCCGGCATCTCCCAATCCCGTCCAGAACTG
GTTATTGGAGAGCTGTTTGGAGCTGGAATTTTCGTCACAACTGTCGTCTC
AGGAGCCATTTGTATAACCAAGCCCTTCAAACTAATGGAGAGACCCTTCT
TAAGAGATATCATTTTCTACCTCGGAGCTGGGTTCTGGGCATTCTGGATT
TTCTATCGGTAACTGGAACGCTCATATTTCATGCATATATTATCCAAACT
ATTCTCCCTTTTGCCTCTCATCTAGAGCGCAACGAAACTAAGGCCACACA
TTTATAGTTATTTTGGGTCAAACGGATCGTGAAATTCAAGAGCACCTTCA
TTTACTAAATTTGGTCGGTCCATTTTTCAGAGTATTACATCATTCCAGTG
GGGAAGACAAGGAAAATAGGACGAAATACTTTGGCACATCCAACGTATGG
TTGTTTCGGGGGTTGTCCTGAATAGTAAAATCCGAACGTAACGGCCACAA
AATCGGCCAATTTGCCATTTCCATAATTAGGAATAGAGATAGGCCACGTT
TTAGGTAATTTGAGAGTGACATTTTCACAGAAAATACTCCATTGAATAGA
CTACGCACGTAATTATTTGGGGAATTATTGACCAGAGTTTTTTTTTAATT
GCACATCATGCAAGTCAGAACAAAAGTTGAGACATTTTGAGGGGGCAAAC
GAAATAATTTGACGCCGCGGAAGTGTTGACAAATGTTACGTGTACGGGTT
GTTTTGTTTGTTTTTTTGGAAGTCCCCGGACATTTTTGTCCAGCTAAGAA
ATCTCTATTGAGACATAGTCAGCCCGGCGTTCAAATTTATCATGAATTAT
TACTTTTCCCTCGAGGAATTACCACAGGTCCGTCCAATTTAATCCCGCCA
AGGAAGCAAACAAACGCTGTGAGTGAACACCACTAGTTGCTGTGAACTGG
GGAAGCCCGGATTCGAACCCCGGCTACTCAGTACGAGCGCAGCGCTCGCT
GACACTGAGCTATGGTGGATTCCCAGACGTGCACGGGTATTTACGTGTTA
AGAAAGACTGACACTTGTCGCATCCCTGTAAATTTAGGTAACCAAAGTTT
TGAACTGAAGTATCTTTTTCTATATCTACCCGTCCCCCAATTGAAATATA
AGTTTCGGCCAAAGGCCAATCGATTAGTACTCTGTATGATTTTAATTCTT
TTCAAAGATAAGTACTCTGTATGATTTTAATTCTTTTCAAAGATAAGCCT
TCTTACGATAATAAGCTTAATGTACGATGAAAAAAGCCTTGCTATCCTGT
TCGTACAAACTGTGTGGTTGTGAGTTGCACTTGCACACCACAGATTTCAC
GAACGACGGGCCAGATCATGTTGTGTCTAGAAATCCGTGGTCGATCCCAA
GTTGCTGAACCAAATTCCAACTCAAGTCCATGATACTGAAAGAATGTCAC
TCGAAGTGAGTTATTATCCGGATTAGTCATGGTTGAATCTCATTCTTTCC
AGGGGCCACATCGATTTGTATGATTCGCTGGGATTCTTGGCATTATACGT
CTTCTACATCCTAGTGGTTGTGATTGGCCGCGCCATTCACCAAAGACAGC
GCAGATCGGCGGAATTGCTTGTTCAGCAAAGCTCAGAAGAGGAGCCATCG
TCGGAATTGCCATCCAACGATGACGGCCTCAACATTTTCACGCCCAATGC
AATTCTGGCCGACGAGGCTCAGCCCATCACCGAAAGCGATGAGATCGACG
GCGAGGAGGTCACCGACGAGGAGGTGCTGATCCGGAGCACCTCCAGTCCA
ACGCTGAACAATATCAATGGTTCTGACCCCGAGTTGAATGTCCGGAGTCC
CTGGAAGCAGCTCTTCCAGGCTATCGTACCTTGGGATGGGTCCATCCTGG
CTTCGCCCACCACCTCCTCCCTCAGAAAGATGTGGGAAGTGACCAAGAGC
CCGGTGGTGTTCCTCCTGAACCTCACCATCCCCATATTGAACGAAGACCT
CCACCAAATGGGCTGGTGCCAGTATCTGGTCGTTCTTCAATGCTTGATCG
CGCCCCAATTCGCGGTCTTTGCCACGTCCATGGCATTCTTTACCGTGTAC
GAGAGCATCGTGCTCTGGCACCTGATGATTGTCCTGGGTCAAACCTTGGC
CATCTTCATCCTCTGCACGTCTGTCCCGTTCAAGCCACCCATCTATCACA
CGTTTCTCTCCTACGTTGGCTTCTTCACGGCCGTGATCTGGATCTACTTG
ATCGCCAACGAGATTGTCTCGCTCCTCAAGACGTTTGGGGTGCTCTTTGG
CCTCTCGGACGCCATCCTCGGGCTCACCGTGCTGGCTTGGGGCAACTCCA
TCGGGGATCTGATCGCAGATACCTCGATAGCCCGACAAGGCTACCCTCGC
ATGGGATATTCGGCCTGCTTCGGTGGTCCCCTGTTCAACCACCTCCTCGG
CATTGGTATCCCTTTTACCAAAGTAATCCTGGAGGGCGATGGTCGACCGG
TCCTTCTAAATTTCACCCCTATGATTTTCGTCCTCGCTGGCTCGCTGGCA
GTGGCTCTCCTGACCTCATTGATAATGATGCCCTTGTCCAGATTTAGGGC
AACCCGCCGCCATGGGTTCTTCCTCATCTTTGTGTACCTCGTCCTGCTTA
CAGTCGCCTTGACCGTGGAATTTACTGTGATATTTTAGATGTTCCCCAGA
CTGAAGTAGTAAATGCTAATGGAA
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