Tk01403, Tk01403 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01403
Unique NameTk01403
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length591
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1420.30coord: 373..586
e-value: 2.6E-10
score: 42.0
coord: 111..223
e-value: 8.0E-19
score: 69.8
NoneNo IPR availableGENE3D1.20.58.1130coord: 90..110
e-value: 8.0E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR12266NA+/CA2+ K+ INDEPENDENT EXCHANGERcoord: 32..587
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 420..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 530..556
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 394..398
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 449..453
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 431..448
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..419
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 454..476
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 568..590
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 371..393
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 557..567
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 497..518
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 591..591
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 519..529
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..370
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 477..496
NoneNo IPR availableTMHMMTMhelixcoord: 426..448
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 177..196
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 206..225
NoneNo IPR availableTMHMMTMhelixcoord: 458..480
NoneNo IPR availableTMHMMTMhelixcoord: 399..421
NoneNo IPR availableTMHMMTMhelixcoord: 568..590
NoneNo IPR availableTMHMMTMhelixcoord: 497..519
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 534..556
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 433..583
e-value: 5.8E-25
score: 87.9
coord: 80..219
e-value: 2.6E-24
score: 85.8

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold229_size244821-snap-gene-1.11-mRNA-1maker-scaffold229_size244821-snap-gene-1.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01403 ID=Tk01403|Name=Tk01403|organism=Tigriopus kingsejongensis|type=polypeptide|length=591bp
LQGRSLDVVTELECSLETPFAMFHSHRDCDFVHHINSSAAQCAFVQANPD
CQADGGFIDYIDIYFCIFSSYKYLAILAFVTGLLILFISLATTADDFFCP
NLAVIAKTLRLSQNVAGVTIMAFGNGAPDIFSSLAGISQSRPELVIGELF
GAGIFVTTVVSGAICITKPFKLMERPFLRDIIFYLGAGFWAFWIFYRGHI
DLYDSLGFLALYVFYILVVVIGRAIHQRQRRSAELLVQQSSEEEPSSELP
SNDDGLNIFTPNAILADEAQPITESDEIDGEEVTDEEVLIRSTSSPTLNN
INGSDPELNVRSPWKQLFQAIVPWDGSILASPTTSSLRKMWEVTKSPVVF
LLNLTIPILNEDLHQMGWCQYLVVLQCLIAPQFAVFATSMAFFTVYESIV
LWHLMIVLGQTLAIFILCTSVPFKPPIYHTFLSYVGFFTAVIWIYLIANE
IVSLLKTFGVLFGLSDAILGLTVLAWGNSIGDLIADTSIARQGYPRMGYS
ACFGGPLFNHLLGIGIPFTKVILEGDGRPVLLNFTPMIFVLAGSLAVALL
TSLIMMPLSRFRATRRHGFFLIFVYLVLLTVALTVEFTVIF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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