maker-scaffold237_size242172-snap-gene-0.13-mRNA-1, maker-scaffold237_size242172-snap-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold237_size242172-snap-gene-0.13-mRNA-1
Unique Namemaker-scaffold237_size242172-snap-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold237_size242172supercontigscaffold237_size242172:27615..28750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
af458289_1cellular retinoic acid retinol binding proteinmaker-scaffold237_size242172-snap-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:exon:821maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:exon:821Tigriopus kingsejongensisexon
maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:exon:822maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:exon:822Tigriopus kingsejongensisexon
maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:five_prime_utrmaker-scaffold237_size242172-snap-gene-0.13-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold237_size242172-snap-gene-0.13-mRNA-1:cdsmaker-scaffold237_size242172-snap-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1969168auto1969168Tigriopus kingsejongensispolypeptide
Tk05160Tk05160Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05160

>Tk05160 ID=Tk05160|Name=Tk05160|organism=Tigriopus kingsejongensis|type=polypeptide|length=140bp
MSGDKIPGQWQMTSSENFDAFMGALGVGYLTRKLGNASKPLVSITKEANE
DFVMKQESLVKASTISFSLNKPFDEVTADGREVKSLMTLDRPNVLIHKMQ
GTNGGKDSICWREFFDDKMKCTCQVDDIVTVRMYDRVKAS
back to top

mRNA from alignment at scaffold237_size242172:27615..28750+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold237_size242172-snap-gene-0.13-mRNA-1 ID=maker-scaffold237_size242172-snap-gene-0.13-mRNA-1|Name=maker-scaffold237_size242172-snap-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1136bp|location=Sequence derived from alignment at scaffold237_size242172:27615..28750+ (Tigriopus kingsejongensis)
CTTTTCCAGATGGAATGACCAACCTCGTCGCTAGTGTTCTCGTCCCTTGG
CGGACGTACAAACATCAGCGACGGCATACGAGTAGACAAACTTTCCATTT
TACCTTGTCCATTGGATCAGAGCGTTCGAGTGTTCAGGGAAAATCCGTGG
ACGTGGAATCATGAGCGGAGACAAGATCCCAGGGCAATGGCAGATGACCT
CGTCCGAGAACTTCGACGCCTTCATGGGAGCCTTGGGAGTGGGTTATCTG
ACTCGTAAGCTCGGAAACGCTTCGAAACCATTGGTGTCTATTACCAAAGA
GGCCAATGAGGACTTTGTCATGAAGCAAGAGTCCCTCGTCAAAGCCTCTA
CCATTAGCTTCAGTCTGAACAAACCCTTTGACGAGGTCACTGCCGACGGG
AGAGAGGTGAGATATGTCAACATATGCAGCATCTGTTCCAACACTTAGGA
TTATACGGATTTGTGATCATCCAGGGCCAATGGCAATTCAAATTGGTCAA
ACTTTCATTACGTGTTTTTTTGGCAACATACATATACTACATTTTCTAAG
TCAATTCAGGAATGTGACAACTCTAAAAGGATAACATCGTTAGGCTTTTG
CGCAGGCTCCAAACTATGACCATTGACCGACTATGCTGTCAAGTTCGCGC
CCCGATCCTTATTTTGTGAGATGTTTCATTTAGTGCTTTAATAAAACTCT
TTTTGAATTGATATTTAAGTCAACTTCGCTCAACTTAAATTGCATCTTTA
ATATACGATGCATAGATCCTTAAGCATAGCGAGATTTTTCACACACAATT
TTAAAATAATGGCTGGGTTTATTCCCGCTCTGCTCTCAAATCTCGTATGC
ATTTGTTTCAGGTTAAGTCCTTGATGACCCTGGATCGTCCCAATGTCCTC
ATTCACAAGATGCAGGGCACCAACGGGGGCAAGGACTCCATCTGCTGGCG
AGAGTTCTTTGACGACAAAATGAAATGCACTTGCCAAGTGGACGACATTG
TGACTGTGCGCATGTACGACCGGGTCAAAGCCTCGTGAACCATTCAAACC
CGATCCTCGGATTGAGTAGCCATCATAATCATTCAGCTGTGACCATCAGG
GAATAGTTTAGTCAATAAATATGCAAATTTTCTTGA
back to top
Add to Basket