maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1, maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1
Unique Namemaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2470_size15361supercontigscaffold2470_size15361:5648..12661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
cyclic amp-dependent transcription factor atf-6 betamaker-scaffold2470_size15361-snap-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:570maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:570Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:571maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:571Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:572maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:572Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:573maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:573Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:574maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:574Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:575maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:575Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:576maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:exon:576Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:three_prime_utrmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cds-1955995Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cds-1955996Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cds-1955997Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cds-1955998Tigriopus kingsejongensisexon
maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cdsmaker-scaffold2470_size15361-snap-gene-0.4-mRNA-1:cds-1955999Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1956000auto1956000Tigriopus kingsejongensispolypeptide
Tk07758Tk07758Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07758

>Tk07758 ID=Tk07758|Name=Tk07758|organism=Tigriopus kingsejongensis|type=polypeptide|length=788bp
LISAPENALGHRDTPHRCQRSRVGVPSTTAPMRDYLDSDDTVNFSNEIMN
DTEDLLAQLSNDLGLPEFMEDGLFPNGLLPPDAMDEDNPDVSLFSELMKN
DASFDNALSMKSEPFSPSSMRFPPSPSNSDHSDRDLPVVMTTMPTNHSSP
VKVHSNHTIISPPHSPPDLATHAFLSSSGLHQSFVQVVKTVAPATLSQAS
SPVVVTVSDLTRLKLPIPKVQRPVVPQAPCVTKAPVVLTSSQFAQLAERG
MIHLNNTSVGPGQNVGQLIQNPTDGSSIFIKTEPALISTNHTALTVQSPT
SMVTTSCNVSPAQTVTLAMPSTIPHHISHGNGEMKALKRQQRMIKNRESA
CMSRKKKKEYVTNLEDQIKLLAQENCDLQNENDSLKSKLREFESEKTIWM
DTVLSNPNMKKGTALFALLFVISLNMGGLYSQSKPGLDHRPEAKLFSHGH
EAAFEARHASGGGRSLLWAEEAINRPFENVTKSSPICPMYINQTESLRLD
NQLRGWFTEDPVRKTKQTYAPHLLQSSYNHSPPSTRGQYLPQGNDEPTTS
VGLVRTAPPALNGRIYHMLLADQVKSAKPHVPRPAVPVMSPREDAQITFY
DSDTPRFSYESFFEAIDRRPDTFYVVSFSGDHLLLPATSHNQTNRPRMSL
LLPSLSVPMNDSMQPPSNHVAMMQIDCEVMNTRLLHIREDAVPVHMSAHL
KNASVQKNGSLDSEEGETNEIRHSNTSYNHIEDIAPEDFESNPRHSYTQG
LDDGLRMRSVRRKRGSKLSKAAPNSTPLYKRKRSSLSP
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mRNA from alignment at scaffold2470_size15361:5648..12661-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1 ID=maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1|Name=maker-scaffold2470_size15361-snap-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7014bp|location=Sequence derived from alignment at scaffold2470_size15361:5648..12661- (Tigriopus kingsejongensis)
GGGGAGACTCCTCTTCACAAGTGGCTGGGTGTTCAGGTGCTCGAGTGCCT
CAGTTACCAGTTGGACTGAACCTGCGGAAGACCAGGGAAAGTGCATAAAA
TCTCCGCCGCAAGCCGAGGGCCTAAAAATGCTGACGAAAGAGAACTCGAG
ATCCTGATTAGCGCTCCTGAAAACGCATTGGGCCACCGAGACACGCCTCA
TCGTTGCCAGCGATCCAGAGTGGGCGTCCCCTCGACCACTGCACCCATGC
GGGACTACCTTGATTCCGACGACACAGGTAAGACCCGTCATCAGCCTCGC
ATTGTCGCTCCTCCACCTCCTCCACCTCCTCCACCACCCATCCTCAGGCT
CTAAGGAGCCATAGCGGGCCACCCGTTGAACGGTCCTTGGGAAGTATCCC
TCCGCCCGGGAGAACTCTGGGTCCAGTCTCGCACCTCTCAAGGTTTCAGT
CGGCTCTCCAGTCTCCCCCTCGAGTATTCTAAAGCAGAGTTCAATAATCG
ATAAGGTGGGTGCCGTGAGCTCCGCGGCCCCAGCGAAGAACAAGCAACGT
GTCTTCTTTCTTTCTTTCACTCGCCTTTGGGTTATAGTACTATATAAACG
AGTACTGCCCGAGTCCCACGTCACTCAAAGTGTCTCGGGATAATCGACGC
CACCTCGAGTACGCGATTGGACATGGGCCAGAGCGACCTGATCGGTGGCT
ATCCCACTGGAGGGGTGAACGAGTCCTCTGGACCAGGCCAGACATTATGC
TGCATAACCCGGGGAAGTCCGAGCTAACTGGGTTCCATTGCCGATACACT
AGCGTGTAATGCATCGATTCGCTGATCATGTGCGACGGCTGCCCCTGGCG
GTAGCCCTCAGTCCACACCCCTATGATGGTCGGCTTGAGATCGGACAGTG
ACCCAGGAGCCTCGACCTAAAGCTGCGAATGGATAACTGTGGACTAACCG
CCGTAGACTGAAAAGAAACCGGTCCACAACCTCCCCGGAGCACTCCGATG
CACATCGGAGGGGGGCAAACTAGTCGGACCCGGTCTTGCCACCGGACGTC
TACTGATCTGTTGACATGATTGAATCGGGTACGGACTTTGTCTGAACCCT
CATTGTCGTAGAAAAGTCCCGCCCTGCTTCGACGCCAGTTGCCAGACTAG
CCAACCCGCTTTCATACTTCCGAGCGAGTGAATGAAAGGGTTTGTGAGCC
ACACTCACGGAACGGAGCGCTAATTGGATCCTAACCCATTCAGACGCTTT
TTCAATCACTTCAGGGAGGTTGATTGAATCGCGGAATTGCCTCCATACAG
GCAGGCTTCCATGCTGCAGATCAATTCTTACAGCAGTTCGAAAGCCAACT
AGCAGCTGTGACTTGTAAGTGTGGGAACGAGGGAAGAGTCAGATAAGAGC
TAACAGCTGAAGTTTGCAATATGCATACACGTTCCACACCTTCTACCTGT
CCAATATCACAAAACCAGTATGTCGGTGGAGGGCAGGATCAGGATTGCGC
GGGACTACTGAAAAATCTATGCACTCGAAGTGATCAAGAAGCGATACACG
GATTGTACATCCAGTTGAAGAGAGTCATAGGAACTGTAATCAAAATGAGC
CGATTTTTCAGAAGTGTCATTAAGTTTATATTTATAGTATACTACTGTAT
AGAGTGCCGAAGTGGTAATGGTGGACGAATGGAGGTTGATTGCTCATCGA
GGGACAGTCAAGGGAGACATGAACTAGAGTCCATGAGATGAGTATTCAGC
GACTAAGCTGAAAATTACAGTGTGGTAACAGATTCCTCCTGAATTAGTAC
CTTGAGTAGTCTCCCAAGGGAAGTACACAAGAGATGATCATGTTCAGTAC
ACGCTGATCAGCAGCAAGACACAACAAATACAACTGCCAGGACAGCCCCA
ATCTAGTCAACTTCATAATTGTCAGACCTTAGACACAACATATATGTAGT
GTATAATCACGTCACCCCAGTCACGACTAGTATGTAAGTATGTGTATGTA
TGTATTTGGGGATTTTTAGGTACACCCACGACTAGAGACATGCTCACAAG
CATTTTTTCACAATAGACGATGTGTACAATAGGTGGTTTTCCATTGGGCC
TTTCCGAAGTGGTGGCTGATCAAGAGCTGACGCAATCCCGTGTTGTCGAG
GTGGTGATGAAGGTGGAGGAGGGGGGCTCGAACCGGGGTACTTTCTCACT
CCAGGAAAGAGTCTTGACCACTTCGCCCTCTTGCTTGTGTATACTTATAT
AAAGTATATTTGCTGAAGTGTCCACTTTAAAAAAATCAATAATAAATTCG
ATTACACACACACACGTAGTTAGTTGCTGCTCAGATCGAACCAATAACTC
TCGGTTGACGCAAAAATGCCGAACAGATTCTCCTTAATGCCTTCTGATTT
AAATATCAATTCACTCAAATTACGGATAGGGCAAGTTATAGACTACCAAA
GGAATTGTCGCACGACCCCTTGAGGAAATCGTCACAGGCGTGTGAAATTG
TCACTTGGTTAATTGATTTCCTCGCTGAATAAACATCCTTTTTGCCCTGC
AACCCAACAGCCTAGCCATGGTAGAATGGTAGACTGGAAATTGCGAGAAG
CATTGGTATATTACAAGGCCTTTTGGTAGAACTAAGACCTACTCAGGAGG
TGACACTTTCGAACCATGTTGTGCTGCGCTGGGCAAATGAGTATGTGCCA
TAGAATGCCCTAACATTTGTCGGTGCTAGAGTGCCTTACCAGCGAGAGTA
ATCGCTCGCGGGAGAATGATGCAGTCACTTTGATGTACCAGTCAAGTCAT
TGCCAACTGAAATGCGTCTGGATAAATATTGCGAGCGAGTTCCGAAATTG
ATAGTGGATTTGATAATGGCCACAGGACGAAACTCTGCTGGAATGAAATA
GAAGTGTGCGGCTCCTTGCCAGTAGCATCTGGAAGCCGTTCGCGCCGAAA
TCATCCGAATGCAATAATCTATTGCAAAGTCCCAAATGGTGTGGATTCTC
CATAGGTCGTCCTCCTTCGTCGTTTTCCGCCTGGACATGCTTGGAACTTG
TGCCAATTGGGGCAGAAAGCTTGGTAACGTCACAAGTGGCCGCTAATCTG
GTTTTTCAATCCCAACCAATGCCAAAGAGAGTAACTCGTGGCCGCGAATC
ATAACCTTTGTATGTTGAACGTTGTTTAGTTGGCATTTTCGGGCCATTCG
ACCGAGAAAATGGTGTTCCTGTTGCTTCATGGCCAAGGGCCAATGGCAAG
TTCCTTCCCCTCCTGCATCTTTCCACTGGGATCTCCAAAGGCGCCCGGAC
GAGAGTGTGGTTTTCCCATGTCTTTCCTCCTGATTTTCTGCTCACATGAG
CCTCACTTGGGAGCCGGTTCTTCGTTTGGCGTGCACACGTAACAGGTCCC
TCGACTCTGCCGAGTACACTACCTGTGCTGAGTACAGAACACAAGTCAAA
CCCCCGTCAGATCCACGCCGCCAACCAAGCAACCTGCCTGGTAGATGCGA
GGGAGCAATGACCAAACTGTTGCTCCGTTGGCTCATGATGTTCAATCGGG
TGGGAGTAGATGCTTTCCTCCGAGCAGTTCAACATGCCGTTCAAGTTATA
GTGGACCTCGTAAAGTAACAGTGAGGTCTTTCGTGTGGCGTCGAAGCCTG
GACACTCCCCCTCCACACAAGTGTTGTTTCTTGTTCCCTCAGAATTTTAC
TTACGGCACATTGCAGCTAGTTCACAATTAAATGAGCCCAGTACATCAGT
GACATCATTATGATGCACCGAATTTGTGTGACCAAGACCAAAAAGGATCA
CATCATTGAGATAGGACCTGATGTGAAGCCGATTCGGATTTCTAAAGGTG
AATGCCTGTTCTTCCACATCATGGTGGAGCAATTGAATCCCAACCACAAT
CCATTGCACAATGAACATGATACGCAGTAGCCCTTTAAGTGAACGTTTTT
ATTTGCAGTGAATTTTTCCAACGAGATCATGAACGACACTGAAGATCTCC
TGGCCCAACTCTCTAATGACCTGGGTCTTCCGGAGTTCATGGAGGATGGA
CTCTTTCCCAATGGGCTCTTGCCGCCCGATGCCATGGACGAGGACAATCC
TGATGTATCTCTGTTCTCTGAACTGATGAAGAACGATGGTAATGCGCGAC
GACACATCTTGTTTCCCCCAGCATTTTCTAGGCCCAATAGCTCGGAACAC
TGGCTCCCAATAGTTTGTAGCCAGGAGCTGATACCCGAATGAATGAGGCA
ACCTCCAAATGCCATGATGGCTCGCCACGGTCACTGAATAGGTTCCCAAA
ACCGACGGCACGAACTATAAGCGAATTTGTCTTATGATATAATTTCCATA
TTTTCTCTAGCGAGTTTCGACAACGCCCTCAGTATGAAAAGCGAACCTTT
CTCACCCTCGAGTATGCGGTTTCCTCCCTCGCCCTCGAACTCGGACCATT
CGGATCGAGATTTGCCAGTGGTCATGACCACCATGCCCACAAACCATTCC
AGCCCAGTGAAGGTGCACAGCAACCATACCATCATTTCGCCACCCCATTC
CCCTCCGGACTTGGCCACTCATGCCTTTTTGTCCTCGTCCGGACTACACC
AATCCTTCGTTCAAGTGGTCAAGACAGTGGCCCCGGCCACCCTCTCCCAA
GCCTCCAGTCCGGTCGTGGTGACCGTCTCGGACCTAACCAGGCTCAAACT
CCCCATTCCCAAGGTTCAACGGCCAGGTATGACTGACCCTCTCACCCCGG
GATATTCTGTATGTATCGAGTGAGGTAATATAACATCTTAATTGCCTTGT
GCTCTCTTTAGTTGTCCCTCAAGCACCTTGCGTCACAAAAGCTCCCGTCG
TCTTGACCTCCAGTCAGTTCGCCCAGCTCGCCGAGCGTGGAATGATTCAT
CTGAACAACACTAGTGTTGGCCCCGGCCAAAATGTTGGCCAGTTGATACA
GAACCCCACGGACGGCAGCTCAATCTTTATCAAAACAGAGCCGGCACTCA
TTTCAACCAACCATACTGCCCTGACTGTCCAATCCCCGACGTCGATGGTC
ACAACCTCATGCAACGTGTCGCCGGCTCAAACTGTCACATTGGCCATGCC
ATCCACGATACCGCATCATATCTCTCATGGGAATGGCGAGGTAATTATAA
GTTACACGACCTGTTAGGCTCCACAGATTGGCATTTGTCCCTATCCCGAC
TCTGGTGGCGATATCGCGAGTAGGAATTATCAGCTTCAATTTTCTGTTCA
TCCCTCTTAGATGAAGGCCTTAAAGAGACAGCAGAGAATGATCAAAAACC
GTGAGTCCGCCTGTATGTCCAGAAAGAAAAAGAAGGAATACGTCACAAAT
TTAGAGGACCAAATCAAGCTTCTTGCCCAAGAAAACTGCGATCTCCAAAA
TGAAAATGATTCGCTCAAGTCAAAGTTAAGAGAATTCGAGTCGGAGAAAA
CGATATGGATGGACACCGTCTTGAGCAATCCCAATATGAAGAAGGGCACC
GCTCTATTTGCGCTCCTTTTCGTGATCTCCTTGAACATGGGTGGCCTGTA
TTCCCAGTCAAAACCTGGCCTCGATCACCGACCGGAAGCTAAACTCTTCA
GCCATGGTCACGAGGCCGCTTTTGAGGCCAGGCATGCCTCGGGCGGAGGC
CGCTCCCTGCTTTGGGCTGAGGAGGCCATCAATCGACCCTTTGAGAATGT
CACCAAGTCGTCTCCCATTTGCCCCATGTATATCAATCAAACCGAGTCCC
TGAGGCTGGACAACCAGTTGAGAGGCTGGTTTACCGAGGATCCCGTCCGG
AAGACCAAGCAGACCTATGCTCCACACCTCCTGCAGTCGAGTTACAACCA
TTCCCCGCCCAGCACCCGCGGCCAATATCTCCCTCAGGGCAACGATGAAC
CCACGACGTCGGTGGGTCTGGTGCGGACAGCGCCTCCCGCCTTGAATGGG
CGCATCTATCACATGCTGCTAGCCGATCAGGTCAAATCCGCCAAACCCCA
TGTTCCGTAAGTACAGTGGCGGCTGAAACATTCACGTTCGAAGCGCAGCC
AACTCATGTGAGAACCATGATTTTTTCCAGGCGCCCAGCGGTCCCCGTCA
TGTCCCCAAGGGAGGATGCTCAGATCACCTTCTACGATTCCGACACGCCG
AGATTCAGCTACGAATCCTTTTTCGAGGCCATCGATCGCCGCCCCGATAC
TTTTTATGTGGTTTCGTTCTCTGGAGACCACCTTCTCTTGCCGGCCACAT
CCCATAATCAGACCAATCGACCCAGGATGTCCTTGCTCTTGCCCAGTTTA
AGCGTGCCAATGAATGGTGAGCCTCCATTTGATGGCGCTCTCGGGGTCCC
CAGTCTTCTTACTACTGATTGATATCCCCTCCTTTTAGATTCCATGCAGC
CTCCCTCAAATCACGTGGCCATGATGCAGATCGACTGCGAGGTCATGAAC
ACCCGACTACTGCACATCCGAGAGGATGCAGTACCTGTTCACATGTCCGC
CCACCTGAAGAATGCCTCGGTTCAGAAGAACGGATCCCTCGACTCGGAAG
AAGGCGAGACTAACGAGATCCGGCACAGCAATACCTCTTACAATCACATT
GAGGACATCGCTCCAGAGGATTTCGAGAGCAACCCTCGCCACTCCTACAC
CCAAGGTCTTGATGATGGCCTTCGTATGCGTTCCGTGCGACGAAAACGCG
GCAGCAAGCTCTCGAAAGCCGCACCCAATAGCACACCTCTGTACAAACGA
AAAAGATCCTCTCTGTCACCCTAGAGGCCCGAGGGAGCTTAGAGTCGCCA
CTCAACCCCTCCCAACTCCTGGGAATTTCAAAACGCAGAAGCTTCAGATC
TAGTCGCCAAAGATTGCCGAGTGGCAGCAACAGCGGACAAGGAATACTTT
GCAATTTTCGACACGCGTGCATTTTTTGTTTACGAGACCCTCTCCAAACT
TGGTCATGGGCGGCCTTTCATAGTATTTATTTCATTTTCCAATACAAAAA
AGCTATCAACTCTT
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