maker-scaffold259_size234575-snap-gene-1.26-mRNA-1, maker-scaffold259_size234575-snap-gene-1.26-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold259_size234575-snap-gene-1.26-mRNA-1
Unique Namemaker-scaffold259_size234575-snap-gene-1.26-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold259_size234575supercontigscaffold259_size234575:211459..218640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
e3 ubiquitin-protein ligase herc1maker-scaffold259_size234575-snap-gene-1.26Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:531maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:531Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:532maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:532Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:533maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:533Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:534maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:534Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:535maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:535Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:536maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:536Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:537maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:537Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:538maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:538Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:539maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:exon:539Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:five_prime_utrmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010300Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010301Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010302Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010303Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010304Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010305Tigriopus kingsejongensisexon
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cdsmaker-scaffold259_size234575-snap-gene-1.26-mRNA-1:cds-2010306Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2010307auto2010307Tigriopus kingsejongensispolypeptide
Tk11157Tk11157Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11157

>Tk11157 ID=Tk11157|Name=Tk11157|organism=Tigriopus kingsejongensis|type=polypeptide|length=783bp
MLLSPGFSICQLASSKSGEGHTLALATSGEVFSWGDGDWGKLGHGNSDRV
RRPRPITTLRHHSGSDPQDSALNIRFVATGFRHSALISKEGHVYTFGKGD
LGALGHGTTSTLRQPHLVADLTRRKIGLVACGSNHTVCVSRDGLQSWSFG
GNECGQLGIGSTAGALSPKRIESLNGLQVKKVSLGDAFSVFLTSKGQVLT
CGQHKMTGLPQILTNLHRPTQIPAFELEHVFIVDITVGATHTLALSNKGE
VWIWGRDGLESPDAWVLQPRIVADLSHKFILQISAGSYHSIAWTTPPLQP
TFDDTPHLPNLGLPAAVPPKFTLLANISIHALRDRLKVLYLASNLVAQSW
KFYPSVEDRNLLEPLARDEIRLILSQKVYTLPLVQILQKTMTSSRNLWPQ
VVVRRLHLPSEHNDENCPKTIFAQIAKQVQKLEPAELRFQDRAWKVKLMG
EGADDAGGVFDDIMTEMCRELIDAKSGLQLLIPTPNGVTNIGLNRDTFLL
NSRKSSSHDLRNFWFIGILCGVAIRTRKPIALNLAPFVWKMIVGSQITWN
DLDEVDLNYARSLKSLDDPHLAENHLLPNEYFQGIAFAGQMVSLLPEQLV
LKPQDCPDYVQAAFEQRIREMLPQVKALREGLGGIVPFPILGLMPAKALE
ELVCGQPSISLTALKKAARYRDFDPSHPIIVWFWDILDHFTEEERVLFVI
FVSGRSRLPNNLADLPQRFQILRVDRPENGLPTAQTCFFQLRLPPFTSQA
IMQEKLRYAIYHCRSIDMDQYMLRRDSANGTPN
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mRNA from alignment at scaffold259_size234575:211459..218640+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold259_size234575-snap-gene-1.26-mRNA-1 ID=maker-scaffold259_size234575-snap-gene-1.26-mRNA-1|Name=maker-scaffold259_size234575-snap-gene-1.26-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7182bp|location=Sequence derived from alignment at scaffold259_size234575:211459..218640+ (Tigriopus kingsejongensis)
GATCCTCAATTAGTGACAACAGCTCTAAGGTTCTCGCGAATATTTGGTGC
CTTTCAGAATGAGTCGGTTCCACCCGACAATTGAGTCGTTCCAGGCACTC
GTGTGTGCTCTCGGTTTTTGACGTTTTTCAATAGACACTAAAGTTGCTAG
AACATATCTCCAGAATGCATGCTTCTCTCCCCAGGCTTCTCCATATGCCA
GCTGGCCTCGTCCAAGAGCGGCGAAGGTCACACGCTGGCCTTGGCCACTT
CGGGCGAAGTGTTCTCGTGGGGGGACGGAGATTGGGGCAAGTTGGGACAC
GGAAACTCGGACCGGGTTCGTCGCCCCCGACCCATCACCACACTCCGTCA
TCATAGCGGATCGGATCCCCAGGATTCGGCCTTGAACATTCGCTTTGTGG
CCACCGGATTCCGCCATTCCGCCCTCATCTCCAAGGAAGGGCACGTGTAC
ACCTTTGGCAAGGGCGATTTGGGAGCCTTGGGCCACGGAACCACCAGCAC
CTTGCGACAACCTCATTTAGTGGCTGACCTAACGAGGCGAAAAATTGGAT
TGGTGGCTTGCGGATCCAACCATACGGTGAGACTTTCAATAAAGTACGGA
CCTGGCCAGCAGACGTTTCAACGCGATTGGATGCTGCGGGGTTTTCCAGG
CGGAAATGAGTGTGCCATTGGTCAGTCTTGAAGTCTTGAAGAAGGGGTAG
GGTTTTGAGACATGACTGCCTGGCCAGGAAATTTCAGGATGGCAACGTCT
TTGACCTTTGAGTCTTCACTGATCCCAGTCAAGACCACGGTTGTCATTTG
ATTTTTTATCCATCTGCGCAAAAAGTTGTACCAATTTTGGTTTTGGCATG
TCATAATACATTTGTCACACTGGGGACATTTTTGACTTTGCTCTTTGGGT
TTGAAACAATTTGGTTTTACTACATCCTACTGCATCAGGGAATTGGACAA
ATTGCATGATTAAAATTGTATTTGTATATGTTTCGATTTTCATTTTTGCT
CCCATTTGAAAAATCCACGTATCGTATTTGGTTTTGTCATGTTGTATTAG
GCCTTATATTCGCTAAGGGGGAGGGGATTTCAACTGTTTCGAGGGTGATA
CATTGTCTTTACTTTAGCATTTGACCTCGCCTTTTTGCTATAAAAAGAGT
ATGTCATCATACGTATATTTGTAAATACACGAAGGAGCTTGGCGCAAGCT
GATTGACTGTCATTTGTTTCAAATTTGTAAAATGTTTCTAGAGAAGCATG
AAACAATATCATTGGTAAACCTTTAGCCTCTGAAATATCTAATTGAAGTG
TATTATTTGTATACCACCATTTACTGAACGTTCTTCAGCAGGCCCAGTTC
AGTTATACATAGAAGGGAGGCCAAAAGCTTTGCCTCGCTCTTCATTTTTG
AACCAATGTGTTCGCGTGTCTCTCGAGGGTCAAAATTGAGCTCGGGCCAT
TGACTGAGACATATGTGGGTTATTTTTCGAACCACTTCCGGTACAAAGAC
CAATCCCAATTGCGGGCTCAAGAGGGGTATTTGATGCCTACCATGTCGGT
TGACCCCCTATTCCCATGGCCAAGCACGTGCTGTACATTGCTCATTGAGC
CACAAATCACACAGTTCCGTACGAGTTCCAAAGTGGGATTGGCTCGAAAA
AATGGCCATTGTCCGCATACCAAGTCGCGAGTGGCGACATGACGGAGTGG
CCAATGGCCAACCGAGCTGGCCTGTCACCCTCGACCATATATCTTTTCGC
CCCGACATGGTGGAGCCCTATGCACTTTTTCGGGATCAAGCCGTGGGAAA
TGGGGTGGGAAATTTGCCTTCGCCGAGGGAGAAATAGATTCATGAGGAGA
GTGCTCTTTTTCCTCAGGTCTGCGTGTCTCGCGATGGTCTTCAATCCTGG
TCATTTGGTGGCAATGAGTGTGGACAACTGGGAATTGGATCCACCGCCGG
CGCTCTGTCTCCCAAAGTGAGTGCTTGTTCTCTCCTTTCGGTGTGAGTCT
TCTCATGGATCACTTCCCCTTGGCAATTGTTTTCTCCCTTTTCCAGCGTA
TCGAGTCCTTGAACGGCCTTCAAGTGAAAAAAGTTAGCCTTGGCGACGCC
TTCTCCGTATTCCTTACCAGCAAAGGACAGGTTCTCACTTGTGGACAACA
CAAAATGACAGGGTTGCCTCAGATCCTCACCAACCTCCATCGACCCACAC
AGGTTGGACCGTGCTAAGAGAAACTCCAGCTTATAAGCACCCGCGAGCGC
GTTCACTCATCCTCGCTGGACTTGGTTTCAGATTCCGGCCTTCGAATTGG
AGCACGTCTTCATCGTGGACATTACCGTGGGCGCAACACACACCTTGGCC
TTGAGCAACAAGGGTGAGGTGTGGATTTGGGGCCGAGACGGCCTTGAGAG
TCCGGATGCATGGGTCCTCCAGCCTCGGATTGTGGCGGATTTGTCCCACA
AATTCATCCTTCAGGTAATGGATGCAACCCACAGATAAGCCAATGATGCA
ACAACCACGCTTGGCTCGTATTTCCAGTCGGAATGAGGTTGGAAGCCTGA
CACATCGACATCTGAAGAGCCATTTGGTGCTCCCCATAGATGTACTCTAA
TTGACGTGTTCGAGGGATGAGCATACCAATTTGGGACCCAATCTTAAGAA
TCACAGAATATAATTTGAAATGTCTTTGGCTCTACGCCGGTTTTAGATGT
GGCTTTTCCACTTCTTTTCACCTCATACTGCCCTCAGACAGACACAGATC
AACGGAAAGTTGATAGTGTAGCACCGAAGGTGCAATCGAGATCTGAAAAG
AATACTAACAAGACCCTGCAGTCCAAAATAGCGACCATATTGCTGATGCA
CCTATCACTGTTTACTCAAATGAGACGAGTAGCCTTGATTTGGCTTCGCC
CCCATAGCAGCCGACTAAAAATCCGATTTGGCGTGATGTGTATTGGGTCC
AAATTGGCTAGTCCACCTCCAGAACCTTGTACATTTTGTTCTTGTCCCCG
CGACTAACATAGTCTACGTATATCTTCTGGGTCCCTTCGCAGATCTCAGC
TGGCTCCTACCATTCCATCGCTTGGACGACGCCTCCGCTCCAGCCCACTT
TTGATGACACGCCCCATCTGCCCAATTTGGGTCTGCCTGCAGCCGTTCCG
CCCAAATTCACGCTCCTCGCCAACATCTCTATCCACGCCCTCCGAGATCG
TCTGAAGGTGCTATATCTGGCCTCGAACCTCGTCGCCCAGTCGTGGAAAT
TCTACCCCAGTGTCGAGGATCGAAACCTCTTGGAGCCATTGGCGAGGGAC
GAGATCCGACTGATTCTCTCCCAGAAGGTCTACACACTGCCTTTGGTGCA
GATCCTTCAGAAAACCATGACCTCCTCCCGTAATCTCTGGCCACAGGTAC
GCATCGTCGCCAGGCTCAATTCAAAGGCCCTTCTGCCAATACAAAGACGA
GCATTTATTATGGATGCTCAGAGCTAACGAGGCCCCAACAGACTTTGAAG
TTGCTCCGAGTTGAGAACTCACTTGGGTCCATATTTAATGTGGTTTGTGC
AGTATTTTATGCCACTGCCGCATCACTCTCTCCTCATGGCGAGCAATAAT
ATTGGCGAGGCCATAAAAACTGAGCCAAAGCATAAGATACCTTGGCCCCT
AAAAGACCGTCGAAACGATCAACTTTAGCCTCCTTGGCCAAAGCCATCAG
CCCTCCACTGGGTGCGAACCGGTAAATAGCGATGGATAATTTGAGCTCTA
GGAGGTCGACCTACTAAGCTCGGTGCCTGGGTCTTACTAATCCATTCTTT
GAACACGTTGATACGTTTGGTCTCATCTCCGATGATCTGGGATTTCGAGT
CCAGGGTCGTTCGATGTCAGAGTTCTTCCGATATTGATTAATTTTGTCTA
CCTTCATGCCCGGCGAGGGGCATGATGGAAAATGGGCCATTCAATCTCAA
CCTCTTTGTGTCCCGTTGGGACTACCACAATGGTGGATGTTATAGATTTT
GGTCACGGAGAGGTCGACTAGAAGCCTCGACTTGCCTCTCGAGGTCTAGT
CCGATCTTACACTGTTGCGGTCTCGAGGGAAACTCTAATGAGAACTATGT
AAATGTTGCCGACCCAATCTGGTCCCCAAAACGGACCCTCCTCGTTCTCA
TGCCGACCTAATCCTGGCAGGTTGTGGTGAGACGACTTCATCTGCCCTCG
GAGCACAACGACGAGAATTGTCCCAAGACGATCTTTGCGCAGATTGCCAA
GCAGGTCCAAAAACTGGAGCCCGCCGAACTCCGATTTCAGGATCGAGCCT
GGAAGGTGAGCGACCTTGTGGAGATTGTCGAGCGGAAACCAAGATGAGTA
TCTCACATCCCCGCTCCTATTACAGGTCAAACTTATGGGCGAAGGAGCCG
ACGATGCCGGTGGCGTGTTTGATGATATCATGACCGAGATGTGCCGAGAA
CTGATAGATGCCAAGAGCGGTCTCCAACTCCTGATCCCAACTCCCAATGG
GGTGACAAATATTGGCTTGAACCGAGACACGTTCCTGCTCAACTCGAGAA
AGTCTAGCTCGCATGACTTGCGAAACTTCTGGTTTATCGGTAAGTTGTTT
GGTCAAGCATTACGCCAAGCAAATAAATGTACAATGTTCGCGATTGTTTG
ACCTTCATTCCCGGTTGTCAATTGGCACTCACTGAATGAGACCAAATAGT
CCTAGGGCTCTCTCATCCTCTCTCTCTCTCTCTCTTCTTGACCGAGGCCT
TTCCAAGTAGTGGTGCACCGAAACTCCTTGCTCGGACAAAACTCGCTTTG
GGTTTGAACTCCTACGAAACAATTTCACTTAAATGGAGATTTTTAGAAAG
TAACCCCGAAAATTGATGTATCGCAGAAATGTTCAACTGTAGAGGGATCT
TCAGCATTTTCAGACTTATTGGGAATTTGGATTCCAGGATTTTTTTAGCT
ACCATTCTTCATTTGAAGGTTGTTCAAATTAAAATACATCGCTAACTAGT
GGCCCTAAATAATTCAAAAAGGCGTGCAAAATGTTCTATTCCAAGTAATG
AGGATCATATTTTTCAACATTAAATTATTATTTTACTTGTGATCGAAGGC
ATTGTTGTGAAGTGGTGGGAGACAAATTTCGGACATCTGTCTTGAATCCT
GGTCAGGTTTAAGCTTTTTTCCTTTGATAACCAACCCCAATCTGGGTTTG
AACTGGCGAAATCCCAGTCTGTTTGGATTCTGAACTACTTGAAGGCCTCG
GAGCAAGCAGTACACATCTTTGAAGCCAATTAGGCTTAATCAACCGAATG
TTCTCCTGCCCTTTTCCTATTTTGAGAGTCTTTCATGTCTATTAAGACTA
GAACAATGGATGCTTTTTTAATCCCCCCCCTGTCGTAAAAAAAGGAATGT
TGGCATACAGTACATATTTTTTTTACTTTGCTCAAATTCGGCACACTTGC
GGAACTGTCTGTTTTTATTGTGTCTGCCTTAGTCCAATATTGAGGCTGTT
GTGCATCCCTAATTAACGAGGGGCGAAATCTTGACAGCTCACTTGCCTCT
GACCCGCATTAGGAATCCTCTGTGGAGTGGCCATTAGGACCAGAAAGCCC
ATAGCCCTCAATCTGGCACCGTTTGTGTGGAAGATGATTGTGGGCTCTCA
GATCACTTGGAACGACCTGGACGAAGTCGACCTCAACTACGCCCGTAGCC
TCAAAAGCTTGGACGACCCTCATCTAGCCGAGAACCATCTTCTGCCCAAT
GAATATTTTCAAGGCATCGCATTTGCCGGCCAAATGGTATCCCTCCTGCC
CGAGCAACTGGTCTTGAAGCCTCAAGACTGTCCCGACTACGTGCAAGCGG
CCTTTGAACAGCGCATCCGAGAAATGCTCCCCCAAGTCAAGGCCCTAAGA
GAAGGCCTGGGCGGGATTGTTCCATTCCCAATATTGGGGCTCATGCCCGC
CAAGGCGCTCGAGGAGCTCGTTTGTGGCCAACCCTCCATCTCATTGACAG
CCTTGAAGAAGGCCGCTCGCTACAGGTAGGGTTGAAGGCGATATCCAGTC
GAAACATTTGGAGCCTGGGGATTCTCCGACGCAAAGAATGTCATTGTTGT
ATCCATCCAGGATCGGGCCGGCTGTCCCACCGTCGGGAGATGGTTCGCTT
TTTCGAAGCTTTGGATGGGAATTCGATCTGCCATTTTGGGCCTAAATAAG
AGGAGGGATCAGAAATGCTCGCCTAACCATTCATCAAAGCTACGACACCT
AGCATTTTTTGTGGGTTGTGATGACATGGGATGTGAACGGGAGGGGGGAA
ACTTAAAAAAAACCTAGCTGTCCAGGGATTATTTATAGCACCCGTGAGCT
TGGGCGTAAATCCCCCAAACCACGCACTTTGACCGGGTTTGAAACCAACC
ATCCCGGTTTCCACGCGTACTTTATTCGGAATAGAGTAAGTGAGGCCAGA
ACCCCACGATGTGGTGCGTTGGATTTTTTGCCCATTGTTCTAACCTCGGT
CCGAGTTGGTGGTTGACCAGCGGTCGGCACCCAAGATTGCGGTCTGCTTT
CATCGTGGCCAGTTTCTCTCCTTTCAGAGATTTTGATCCGTCCCATCCGA
TCATTGTTTGGTTCTGGGACATTCTGGACCACTTCACCGAGGAGGAACGC
GTCCTCTTCGTGATCTTCGTCTCCGGCCGATCGCGTCTGCCCAACAACTT
GGCCGACCTGCCCCAGCGCTTCCAGATTCTGCGGGTTGATCGGCCGGAAA
ATGGTCTGCCCACGGCCCAGACGTGTTTCTTCCAGCTGCGATTACCGCCT
TTCACCAGCCAGGCGATTATGCAGGAGAAGCTTCGCTACGCCATCTACCA
TTGTCGATCCATCGATATGGATCAGTACATGCTCAGGCGGGACAGCGCCA
ATGGTACCCCCAACTGAAGCACCACGGATTTCTAGGATTGAAATGCAAAT
ACCATCGTCACCGGACTTTGGGGGTGGAACACATCTGAGTCGATCTCGTT
CTACTTTTGCCGGAGGGCCACTTCCAGTTGTTATTGTAGTTGTAGTTTCG
GGGTTAAGTCTCATTAGGCACCCTGAGCTGTTTTGTTCTTTGTCTGTGAC
TGGTTAAATTGTGCTATCGAGTGCAGTGTTTTATGTGTATTTACAAATTC
TTCGTATTCTGGGGGCCAATTTTCCGAGGAAG
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