maker-scaffold25_size650667-snap-gene-4.13-mRNA-1, maker-scaffold25_size650667-snap-gene-4.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold25_size650667-snap-gene-4.13-mRNA-1
Unique Namemaker-scaffold25_size650667-snap-gene-4.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold25_size650667supercontigscaffold25_size650667:388587..392037 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
organic cation transporter isoform x2maker-scaffold25_size650667-snap-gene-4.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1564maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1564Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1565maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1565Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1566maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1566Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1567maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1567Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1568maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1568Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1569maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1569Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1570maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1570Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1571maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:exon:1571Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:five_prime_utrmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018627Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018628Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018629Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018630Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018631Tigriopus kingsejongensisexon
maker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cdsmaker-scaffold25_size650667-snap-gene-4.13-mRNA-1:cds-2018632Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2018633auto2018633Tigriopus kingsejongensispolypeptide
Tk06707Tk06707Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06707

>Tk06707 ID=Tk06707|Name=Tk06707|organism=Tigriopus kingsejongensis|type=polypeptide|length=571bp
LATISLTVGDTVCRLHSDLRSEDTVSMQRPSDSDIMEAKEEKIDQVQTIV
GQFGRWQALLLTLAGLSVSMPTAWHILAQPFLSKTPDFTCEIQGQPGVFS
SNEEWAAFSSPLIENQDGNGTTRDHCHIYDINYSELTASDVQEWGVGNQS
NPNLTQCKNFVFNTTYRTIVTDFNLVCDRSYLVTLAQSMFMVGLTSGCAI
AGHVSDRIGRLKSISLFGAILFTSEVVNVFVPNIEIYLFLRFCMGFALIA
ASSAYNTFCIELLGGKWVTIIGVGRGVFWTTGYITTPLLAYYIRDWIHLQ
LTISVGALAMAVLYLYLPESPKWLLAVGKLNQAQKILEQGARVNKRVWPE
DLQLFRTSKAESTSIVHGFWQLLATPNMRKKSLIQFYLWFTCSLVYYALT
LNVGTLFPGNLYINFLISGLIELPVLPLVIVILLYLGRRALLCLGMLFAA
IFMGITLVVPVGMTSIITAMLGKFCITGCFFTLHMFANEIFPTVVRNTGY
GASNMCARFASILAPIFGREMGREIPLVVFGILSLIGSTLVLFLPETKDK
KLPDSMEEGEEFGKNQKVFTF
back to top

mRNA from alignment at scaffold25_size650667:388587..392037+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold25_size650667-snap-gene-4.13-mRNA-1 ID=maker-scaffold25_size650667-snap-gene-4.13-mRNA-1|Name=maker-scaffold25_size650667-snap-gene-4.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3451bp|location=Sequence derived from alignment at scaffold25_size650667:388587..392037+ (Tigriopus kingsejongensis)
TGCTCCAGTGCTGCCATAAATAGGTTGGCCACAATTTCCCTCACTGTCGG
GGACACGGTTTGTAGATTGCATTCCGATTTGAGATCGGAGGACACAGTTT
CAATGCAAAGGCCGAGTGACTCAGACATAATGGAGGCCAAGGAGGAGAAG
ATCGACCAAGTGCAAACCATTGTGGGCCAATTCGGCCGCTGGCAAGCACT
TTTGCTCACCCTGGCCGGATTGTCCGTGAGCATGCCCACAGCTTGGCACA
TTTTGGTAAGTGACCCAAAGGAATGGCATCGATTTCAGAAGTCGCACGTG
GCCTCAGTTCAATGGATACTTTTGTAAATGAAGTTTCGGCCAGGGAGAAA
AATGATAACATAAATGGGGATCATTAAACCCCCAAGATTAAACTAATCTT
GGGGTTTTGGATATGCCAGGGAAACCTAGATATGCTGACAAGAGTCGTCA
GTAAATAAATGCTATTCAGTTCTGAGCGAAGTTGATGTTTGCTATCCCTG
TGCTGCCCTGTGTGAACAAGGTTACAAGTATTCAAACAATTATAACTTGG
GCACAGTGGGTGCAATCAAGTGGGATCAATACTTTCTGAACCGCTGGTCA
TTTTGAACAATATCTAACCACTTGCTACCAGCAGAGCCTGTGAGTTGATG
GGCTGCCTTTGCCGGCATAAATGAGGGAACCTGTGGTCGTAGCTCCAGGG
TAAGGTAACAATTCATGATAAATTTGTAGCGGGAACCATTGATGACTAAA
TCCCTTTAGAGGTGTCTTCGTCAGTCAGCAATGATCTGGAGCCATCCCAA
TAAACAAAAACCAGCAGAGCCAGATGGCTTCATATATGTGAATGTGTTAC
CTCAACATAATCTTAACCCAGGGATCTCTAAAGTGGCTTTTCATGTGGAT
CAAGCAAAAAATGCCAACTCAAGCAAATGCCGATGCTTTTCGAAAAAGTA
GCCATTCTTCATAAATTTGGCTTAAGTGCAAGTTGAGAATTGAGTTTCAA
GCGAATTAAGACACTCGCTGAGGAAAATACTGATGAGCGGGATTTAATTT
ATTTCACCTCAGGCCCAGCCGTTCCTATCTAAAACACCAGACTTCACATG
CGAGATCCAAGGCCAGCCCGGAGTGTTCTCATCCAACGAAGAATGGGCAG
CATTTAGCAGTCCCCTGATTGAGGTAAATATTTTGGATCCTTATATGCTC
TTGTATTGTTACTAAGGGCTATTGTGTTCCAGAACCAGGACGGCAATGGG
ACCACACGAGATCATTGCCACATTTACGATATCAACTACTCCGAACTGAC
TGCTTCAGACGTCCAAGAATGGGGCGTGGGCAATCAAAGCAATCCGAATT
TGACCCAATGTAAGAACTTTGTCTTCAACACCACCTATCGGACCATTGTC
ACGGACGTAAGCGATACCGTTTCATGTTTGTGAATCGGATGTCAACCTCC
CCGGATATTTCTAGTTCAACTTGGTTTGTGACCGGAGTTACTTGGTGACT
TTGGCTCAATCCATGTTTATGGTTGGCTTGACGAGTGGATGCGCTATAGC
CGGACATGTCTCGGACAGGTGATATCAAAATATGATCCTGGCCTTTCCCA
GCCTTGAATGACCTCTGGAGTCTTGCAGGATCGGTCGTTTGAAGTCCATA
TCTTTGTTTGGGGCGATTCTCTTCACATCGGAAGTGGTCAATGTATTCGT
TCCCAATATCGAGATATACCTGTTCCTGAGATTTTGCATGGGATTTGCCT
TGATTGCCGCCAGCTCCGCTTACAACACCTTTTGTAATATGCGATATTTC
AGTGCATCCCAATGATTTCGTAATAATTTCCCCCATCCATCATGGGTAAC
TCCAGGTATCGAGCTTCTCGGCGGAAAATGGGTGACTATCATCGGAGTGG
GTCGAGGAGTGTTCTGGACCACAGGCTACATCACCACTCCATTGTTGGCC
TACTACATCCGGGATTGGATTCATCTTCAACTCACGATAAGTGTAGGAGC
CTTGGCCATGGCTGTCCTCTACTTGTATCTGCCCGAAAGTCCCAAGTGGT
TGTTGGCCGTCGGAAAACTGAATCAAGCCCAAAAGATCCTGGAACAAGGA
GCCCGGGTCAACAAAAGGGTTTGGCCCGAAGATTTACAGCTCTTCAGGAC
ATCGAAGGCAGAGGTACGTGTAATATGGGTAAATATAACTAAGTGCGAGT
GATGCGTATCGTACTGCACCTTAATGTTAATAACCCATGAGCACCTATAT
AGGAACTTTCGGGGGAGAACGACTAACTAATATCGCATTTTGATCTAACA
TCGGATTGATTATTTTAGGTTTGAAGTAATATGATAAAGTAAGTCAGTTA
AGTGACTGAACTAAAGGGAGGTCGCTTTTGGCGATTTTTTGGTGTTAATT
AATATTATAAAGTTAAATTATTTTCAGTGCAATGCTATGTTATACTAAGC
AAGCACTGCCTCCTCAAATGTGTATTTAGTTCAAAGTGGTAAATGTATCC
GATAGGGGATTATAAACACCGACGCATTTCCACCGTGGGCTTCTAAAAAC
CGGAATATTTCAGAACATTTCCGACCAGCCTAATTGGGATTGGGAGTATC
TGTTTGATGCATGTTTATGAAGTTTTCGATTCGAGTTTCTGATAGACTTT
CATAATCTTTAATCTATTTCTTAAGAGCACTTCGATTGTCCACGGATTCT
GGCAGCTTTTGGCCACTCCGAACATGCGGAAGAAATCTTTGATCCAATTC
TACTTGTGGTTCACGTGCTCCTTGGTCTACTACGCCTTGACTTTGAACGT
GGGCACGCTATTTCCGGGAAACTTGTACATCAACTTCCTCATTTCCGGCC
TCATCGAGCTCCCCGTGTTACCCTTGGTCATTGTGATCCTCCTCTATCTG
GGTCGTCGAGCCCTTCTTTGCTTAGGCATGTTGTTCGCGGCCATTTTCAT
GGGTATCACTTTGGTTGTGCCCGTTGGTGAGTGGCTTTAGGTACAAGAGC
GAGGCATGGATGACCTTAATTGACCCTTTTTCTAGGAATGACGTCGATAA
TCACTGCCATGTTGGGGAAGTTCTGCATCACCGGATGCTTCTTTACACTC
CATATGTTTGCCAATGAGATTTTTCCCACCGTCGTGAGGAACACGGGCTA
CGGAGCCTCGAACATGTGCGCCCGATTTGCCTCAATACTGGCCCCCATAT
TTGGCCGGGAAATGGGTCGAGAGATACCTTTGGTGGTTTTTGGCATTTTG
TCCCTCATTGGCTCAACCCTGGTTCTGTTCTTGCCCGAGACCAAGGACAA
GAAGCTGCCCGATTCTATGGAGGAGGGCGAGGAGTTTGGCAAAAACCAAA
AGGTGTTCACCTTTTAATAACTACAAAAAGTTGTTCAATTTTTCCACATG
TTTATATATTTTCATCGTGGCTTTGGCATAAACTTTGGCTTAAAAATCGA
A
back to top
Add to Basket