maker-scaffold287_size221780-snap-gene-1.27-mRNA-1, maker-scaffold287_size221780-snap-gene-1.27-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold287_size221780-snap-gene-1.27-mRNA-1
Unique Namemaker-scaffold287_size221780-snap-gene-1.27-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold287_size221780supercontigscaffold287_size221780:175797..178383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
autophagy-related protein 16-1 isoform x2maker-scaffold287_size221780-snap-gene-1.27Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:exon:93maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:exon:93Tigriopus kingsejongensisexon
maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:exon:94maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:exon:94Tigriopus kingsejongensisexon
maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:five_prime_utrmaker-scaffold287_size221780-snap-gene-1.27-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold287_size221780-snap-gene-1.27-mRNA-1:cdsmaker-scaffold287_size221780-snap-gene-1.27-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2006380auto2006380Tigriopus kingsejongensispolypeptide
Tk01897Tk01897Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01897

>Tk01897 ID=Tk01897|Name=Tk01897|organism=Tigriopus kingsejongensis|type=polypeptide|length=553bp
MANYFNEPWRLSILSQVQERNHRETRPYAELIALQTKLVEKATTLQLENT
QLLFQSRDTVPRGGPMGGLGAGQDVQELKRKLYTLQEELTELHRRKGENA
QLVIDMSSQVKQKDGEINEQAAKLLAFEDQVEDLRRTIEQMSVNMSELEE
TNQLLKDEYQALQLALNSAEKKLVKVQKENEILVVQVMDLKEKDVARMNM
ENDLFQEQQRDMLRRQLEEAASDSRAQVLVETNEVEHTVGNEQLNSLICH
TVRIPNRPYLQWNAHESGINVVKWSPHGSILVTGGEDRKIKIWDVSKGSY
EHRGMLTGSSGAIMSVDFDSSASLLLAGSFDNTCRVWSLDNMRLRHTLTG
HNGKVYAAKFMGDNAKICSGSHDRTIRVWDLRSRACIKTLTCGSLVNDLA
CQDQMIISGHFDKNIRFYDCRMESALTKTIALNDRITSVDLAKNGQYLIA
CTRDDSLSLLDLRAPNSPVTLFAAPDFRVGCDFQRAVFSPDSEYITVGSN
DGSIFIWNINNPGKPRAHLQEHEANVISVAWQPAGNGIASGDKNKKLIIW
ADI
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mRNA from alignment at scaffold287_size221780:175797..178383+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold287_size221780-snap-gene-1.27-mRNA-1 ID=maker-scaffold287_size221780-snap-gene-1.27-mRNA-1|Name=maker-scaffold287_size221780-snap-gene-1.27-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2587bp|location=Sequence derived from alignment at scaffold287_size221780:175797..178383+ (Tigriopus kingsejongensis)
ATCAACACAAGAAGATATCGCGATCCTGGAGCTACCCTTTCAATATCCAC
GTGAGGAGCGTGAGTGTGACATCTTGCTTTAGGGAAGAGCTCTAAGCATT
TTGTGATGCCCTAATCGTATATCCGATCCAGGGCTTTGAACTTTATTTGG
TGCCATGCGGAGATGGTGCGCTATTGGTGGCAAATGACCAGCGGCTCGTA
GCTGGCCGAATTTCTCAAACTAGGCGGTCAACATGGCCAACTACTTCAAT
GAGCCTTGGCGCCTGTCCATCCTGAGTCAGGTCCAAGAGCGCAACCACCG
GGAAACGCGGCCGTATGCCGAGTTGATTGCTCTTCAAACCAAATTGGTTG
AGAAGGCCACAACCCTCCAGTTAGAAAACACACAGCTGCTCTTCCAAAGC
CGAGACACTGTTCCAAGGGGTGGTCCCATGGGTGGTTTGGGGGCTGGCCA
GGATGTGCAAGAACTCAAGCGAAAACTGTACACGCTCCAAGAGGAACTGA
CCGAACTTCATCGGCGAAAGGGCGAGAATGCCCAACTGGTCATCGACATG
TCTTCCCAGGTTAAGCAAAAGGACGGAGAGATCAATGAGCAAGCGGCCAA
ATTGCTGGCCTTTGAGGACCAAGTTGAGGACTTGCGGAGGACGATCGAGC
AGATGTCGGTTAACATGTCCGAGCTGGAGGAGACCAACCAGCTGCTTAAA
GATGAGTATCAGGCCTTACAATTGGCCCTGAATTCGGCAGAGAAGAAACT
GGTCAAGGTTCAAAAGGAGAACGAAATCCTGGTGGTCCAGGTCATGGACC
TCAAAGAGAAAGACGTGGCCCGGATGAATATGGAGAACGACCTCTTTCAA
GAGCAACAGCGAGACATGCTCCGGCGCCAACTAGAGGAAGCGGCTAGCGA
CAGCCGAGCCCAGGTCCTTGTCGAAACCAACGAGTGAGTTACCAATTGCA
TGACGTGCACCCTGACAACGAGTTACTGTCGTTTTGGCAGGTCACATCTG
AACCTACTGCGCTGTGGGGTGGGTCTTTTGATGGGGAGGGGGTCAAAGTG
GGATTTGGGTCTTCGGTACCACGTGATTAAAACAATCTTCTATTGGCGTC
CATAAATATGGTATATGGCTCTGCACCATGCGTGTCTTTAAGTTTTCTCG
ACGTCATTGTTATTGCATGTAACTTTCTCCCACGAAAAGTACCCACAACT
TTGTTCATTCGTTTCGTATGAGAGCTTGCACATTCGGAGATTTTCCATAC
TGGCAATGTGAATTTCCATATGACCATGATCACTTTTCAGGGAGGCTCCG
ACAACGGCCAACCCATTTGTCATCCTCGCCCTTGACGTCATAGAAATCTG
TGCCTACTACTATTCTGTCCGCCCGATCAATTTAACCAAATCGGAGGCTT
TCTCAAATATAATGGCTCCCTTTTGTTCCAGAGTGGAACACACCGTGGGC
AACGAACAATTGAACTCTTTGATTTGCCACACAGTGCGAATTCCCAACCG
ACCATATTTACAATGGAATGCGCACGAGAGTGGGATCAATGTCGTGAAAT
GGAGTCCACACGGCTCTATCTTGGTCACGGGAGGAGAGGACCGTAAAATC
AAAATATGGGACGTATCTAAAGGGTCCTACGAGCATCGAGGGATGCTCAC
CGGGAGCAGTGGTGCAATTATGTCAGTGGATTTTGACTCTTCCGCCTCTC
TGCTCTTGGCGGGCTCATTCGACAACACATGTCGGGTGTGGAGTTTGGAC
AACATGCGGTTGCGGCACACGCTCACCGGTCATAACGGAAAGGTCTATGC
AGCCAAATTCATGGGCGACAACGCCAAGATTTGCAGTGGAAGTCACGACA
GAACGATTCGCGTTTGGGACCTGAGATCGAGGGCTTGCATCAAGACCTTG
ACTTGTGGCTCTTTGGTCAACGATCTGGCTTGTCAGGATCAGATGATCAT
TAGTGGGCACTTTGACAAGAACATCCGCTTCTACGACTGTCGCATGGAGT
CGGCGCTCACCAAAACCATCGCCTTGAACGACCGGATCACCTCGGTGGAC
TTGGCCAAGAACGGACAATACTTAATTGCCTGTACTCGGGACGACAGTCT
CAGCTTGCTTGATCTCAGAGCTCCTAATTCTCCCGTCACCTTGTTCGCTG
CCCCCGATTTCCGCGTGGGTTGCGACTTCCAACGAGCCGTATTCAGTCCC
GATTCGGAATATATCACGGTGGGCTCCAATGACGGCTCAATCTTCATCTG
GAATATCAACAATCCTGGAAAACCCCGTGCTCACCTTCAGGAGCATGAGG
CCAATGTGATATCTGTAGCTTGGCAGCCGGCTGGGAATGGTATTGCCTCG
GGCGACAAGAACAAGAAGTTGATTATATGGGCTGATATTTAGATGGTTCC
TGCTCTACTCATCCAATGTGTGTGTGCATCTAGGCTTCCTCTAATCAACG
ATGTACCTTCACTGTTATGTTTATGGTAGATTTTGTGCTGAAATATGCAG
TTGCCTAGCGTATTTGGCATATAATCATGACAAACTGGTGTAATCTGTTC
ACGATTCGGTGAAAATAGAATCATAATCAAAATGACA
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