Tk01897, Tk01897 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01897
Unique NameTk01897
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length553
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..193
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availablePANTHERPTHR19878AUTOPHAGY PROTEIN 16-LIKEcoord: 9..551
NoneNo IPR availablePANTHERPTHR19878:SF8AUTOPHAGY-RELATED 16, ISOFORM Fcoord: 9..551
NoneNo IPR availableCDDcd00200WD40coord: 261..551
e-value: 1.37809E-68
score: 221.055
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 367..381
score: 40.18
coord: 325..339
score: 36.43
coord: 281..295
score: 36.71
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 341..380
e-value: 5.0E-9
score: 46.0
coord: 465..508
e-value: 0.61
score: 18.3
coord: 423..461
e-value: 2.8
score: 14.2
coord: 383..419
e-value: 1.1
score: 16.7
coord: 299..338
e-value: 1.6E-5
score: 34.4
coord: 512..551
e-value: 2.2E-4
score: 30.6
coord: 255..294
e-value: 1.0E-9
score: 48.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 514..550
e-value: 0.051
score: 14.4
coord: 484..508
e-value: 0.004
score: 17.9
coord: 344..380
e-value: 4.4E-7
score: 30.4
coord: 305..338
e-value: 3.1E-4
score: 21.4
coord: 263..294
e-value: 8.4E-7
score: 29.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 488..511
score: 10.341
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 306..347
score: 12.915
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 519..550
score: 10.976
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 348..389
score: 15.722
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 262..303
score: 16.724
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 398..553
e-value: 1.7E-28
score: 101.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 221..302
e-value: 3.2E-11
score: 45.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 303..397
e-value: 2.8E-26
score: 94.0
IPR013923Autophagy-related protein 16PFAMPF08614ATG16coord: 13..199
e-value: 9.7E-38
score: 130.3
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 367..381
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 281..295
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 262..553
score: 47.352
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 254..550

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold287_size221780-snap-gene-1.27-mRNA-1maker-scaffold287_size221780-snap-gene-1.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01897 ID=Tk01897|Name=Tk01897|organism=Tigriopus kingsejongensis|type=polypeptide|length=553bp
MANYFNEPWRLSILSQVQERNHRETRPYAELIALQTKLVEKATTLQLENT
QLLFQSRDTVPRGGPMGGLGAGQDVQELKRKLYTLQEELTELHRRKGENA
QLVIDMSSQVKQKDGEINEQAAKLLAFEDQVEDLRRTIEQMSVNMSELEE
TNQLLKDEYQALQLALNSAEKKLVKVQKENEILVVQVMDLKEKDVARMNM
ENDLFQEQQRDMLRRQLEEAASDSRAQVLVETNEVEHTVGNEQLNSLICH
TVRIPNRPYLQWNAHESGINVVKWSPHGSILVTGGEDRKIKIWDVSKGSY
EHRGMLTGSSGAIMSVDFDSSASLLLAGSFDNTCRVWSLDNMRLRHTLTG
HNGKVYAAKFMGDNAKICSGSHDRTIRVWDLRSRACIKTLTCGSLVNDLA
CQDQMIISGHFDKNIRFYDCRMESALTKTIALNDRITSVDLAKNGQYLIA
CTRDDSLSLLDLRAPNSPVTLFAAPDFRVGCDFQRAVFSPDSEYITVGSN
DGSIFIWNINNPGKPRAHLQEHEANVISVAWQPAGNGIASGDKNKKLIIW
ADI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013923Autophagy-rel_prot_16
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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