maker-scaffold316_size209483-snap-gene-1.29-mRNA-1, maker-scaffold316_size209483-snap-gene-1.29-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold316_size209483-snap-gene-1.29-mRNA-1
Unique Namemaker-scaffold316_size209483-snap-gene-1.29-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold316_size209483supercontigscaffold316_size209483:118827..120820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
notchless protein homolog 1maker-scaffold316_size209483-snap-gene-1.29Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:230maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:230Tigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:231maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:231Tigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:232maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:232Tigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:233maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:exon:233Tigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:five_prime_utrmaker-scaffold316_size209483-snap-gene-1.29-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cdsmaker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cdsmaker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cds-1997376Tigriopus kingsejongensisexon
maker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cdsmaker-scaffold316_size209483-snap-gene-1.29-mRNA-1:cds-1997377Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1997378auto1997378Tigriopus kingsejongensispolypeptide
Tk05939Tk05939Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05939

>Tk05939 ID=Tk05939|Name=Tk05939|organism=Tigriopus kingsejongensis|type=polypeptide|length=518bp
MPTRAVMSEAPTALGESAAHLEKRAKMDEEHVTVQFETETGQRPFPPMSV
PVGITTDKLQVLLQALLRAEDEDSEDADRPFAFYLQDREIQVDLAECMKW
MLINQERTVPVIFKPQSVFKVKPVTRCTSSMPGHTQPVVVALFSPDGRYL
ASGSGDNTVRLWDISTETPRFECKAHRQYVLALAWSPDGSKLASGDKLGH
VVIWDPDTGKPIGRMLSGHKQFITGLAWQPLHLTNQGECRLLASSSKDGD
VRIWDTITSKFVLSLTSHAQSVTCLRWGGTNLIYSASQDRTIKVWRAEDG
VLCRTLQGHGHWVNVLALNTDYAMRTGAFEPAQAQFVNNISILSGEEKKD
RALQRYNEALAKVKGGEELMVSGSDDFTMFLWNPSKEKQSLARMTGHQQL
VNDVKFSPDCRLIASASFDKAIRLWDGQTGKYLAVLRGHVQAVYQLAWSA
DSRLLVSGSADSTLKLWTAQVRGGYDKTKFLEVDLPGHGDEVYAVDWSPD
GQRVVSGGKDTLLRIWRK
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mRNA from alignment at scaffold316_size209483:118827..120820+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold316_size209483-snap-gene-1.29-mRNA-1 ID=maker-scaffold316_size209483-snap-gene-1.29-mRNA-1|Name=maker-scaffold316_size209483-snap-gene-1.29-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1994bp|location=Sequence derived from alignment at scaffold316_size209483:118827..120820+ (Tigriopus kingsejongensis)
ATCAAAACAAACCCCGATACACGTGTGCACGTGTGTGGTGTGGACATTGC
CGCACGATCATTCTTCCTCGAGTCCGAACCCTCCATGCCGACACGGGCTG
TCATGAGTGAGGCGCCCACAGCGTTGGGCGAGAGTGCGGCTCATTTGGAG
AAGAGGGCCAAAATGGACGAAGAGCATGTGACCGTCCAATTTGAGACGGA
GACGGGTGAGAGCCGGATGAGCGCGCCGTCGGGCACGACCCCAGTCTCAT
CGGCCTCTTCTTTCAGGTCAACGCCCCTTTCCACCCATGTCGGTGCCGGT
GGGCATCACGACCGACAAACTCCAAGTCCTCCTGCAGGCCCTGCTTAGGG
CGGAGGACGAGGACAGCGAGGACGCGGATCGGCCTTTCGCCTTTTATCTG
CAGGACCGCGAGATCCAAGTCGATTTGGCGGAATGCATGAAATGGATGCT
CATCAACCAGGAGCGAACCGTGCCGGTCATTTTTAAGCCGCAATCGGTCT
TTAAGTAGGCTGCGCCCGAAAGTTGGCTCCTGGCTCCATCTCATTGAACC
TATTTGGGGCTCTTCTAGGGTAAAACCCGTGACCCGTTGCACCAGCTCCA
TGCCCGGACACACCCAACCCGTTGTGGTGGCCCTATTCTCTCCCGATGGG
CGCTACTTGGCCTCGGGCTCTGGTGATAACACCGTGCGCTTGTGGGACAT
CTCCACGGAGACGCCTCGGTTCGAATGCAAAGCCCACCGTCAATATGTTC
TGGCCTTGGCCTGGTCGCCCGATGGCTCCAAATTGGCCTCTGGTGAGTCA
TCCGTCATTTTTGGGGGGGCATCCGCCGTATCATTCGATATCCGGGCGTT
CGAGACATAGCCACCACCTAGCTCGGGACCAACATTCCCTCCTTTGAGAG
ACATAGCCACCACCTAGCTCGGGACCAACGTTCCCTCCTTTGACAAGGCT
ATTCGATTGTGCTAACTCAATATGGCTTTGCCCTCCGCTTGATTTAGGCG
ACAAACTCGGACACGTGGTGATTTGGGATCCGGACACGGGCAAGCCCATT
GGACGAATGCTCTCCGGCCACAAGCAGTTTATCACGGGGCTAGCCTGGCA
ACCTCTACACTTGACCAACCAAGGTGAATGTCGTCTGTTGGCGAGTTCCT
CCAAGGACGGTGATGTTCGGATTTGGGACACAATCACCTCCAAATTCGTC
CTCTCTTTGACCTCGCACGCTCAGTCGGTCACGTGTCTACGATGGGGTGG
CACTAATCTCATCTATTCCGCCTCCCAAGACCGCACAATCAAGGTTTGGC
GGGCTGAAGACGGTGTACTCTGTCGCACTCTGCAAGGTCATGGCCATTGG
GTGAACGTGTTGGCCTTAAACACGGACTATGCCATGCGAACCGGAGCTTT
CGAACCGGCCCAGGCCCAGTTTGTGAATAACATCTCGATTTTGAGTGGCG
AGGAGAAGAAAGACAGGGCCCTTCAAAGATACAACGAAGCGCTGGCCAAG
GTCAAAGGCGGCGAGGAGCTCATGGTGTCGGGATCAGACGATTTCACTAT
GTTCTTGTGGAACCCATCCAAGGAAAAGCAATCGCTGGCCAGGATGACCG
GTCATCAGCAGCTGGTAAATGATGTCAAATTCTCGCCCGATTGTCGCCTC
ATTGCATCGGCCTCCTTTGACAAGGCTATTCGATTGTGGGATGGCCAAAC
GGGCAAGTACCTAGCCGTCCTGCGAGGCCACGTCCAGGCCGTGTATCAAT
TGGCTTGGTCGGCTGACAGTCGCCTGTTGGTCTCTGGATCAGCGGATTCA
ACGTTAAAACTCTGGACCGCCCAAGTACGAGGCGGTTACGACAAAACGAA
ATTTTTGGAAGTGGACCTTCCTGGACATGGCGACGAAGTTTACGCGGTTG
ACTGGTCTCCAGATGGGCAGAGAGTTGTGTCAGGTGGCAAAGACACCTTG
CTGAGAATATGGCGGAAATAAAGATATTTTTGTTTGCAATCTGA
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