maker-scaffold40_size501252-snap-gene-1.8-mRNA-1, maker-scaffold40_size501252-snap-gene-1.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold40_size501252-snap-gene-1.8-mRNA-1
Unique Namemaker-scaffold40_size501252-snap-gene-1.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold40_size501252supercontigscaffold40_size501252:112222..115675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein ovomaker-scaffold40_size501252-snap-gene-1.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1068maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1068Tigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1069maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1069Tigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1070maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1070Tigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1071maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:exon:1071Tigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:five_prime_utrmaker-scaffold40_size501252-snap-gene-1.8-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cdsmaker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cdsmaker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cds-1996224Tigriopus kingsejongensisexon
maker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cdsmaker-scaffold40_size501252-snap-gene-1.8-mRNA-1:cds-1996225Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1996226auto1996226Tigriopus kingsejongensispolypeptide
Tk06159Tk06159Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06159

>Tk06159 ID=Tk06159|Name=Tk06159|organism=Tigriopus kingsejongensis|type=polypeptide|length=762bp
LASRKAYDEPIDVVIRRKESERYHPYNRSASAATEPVQDVPINLQIPRTT
VSPPPQSEPVDFSTKKEPKVASEAESKPKNISFTSSKELRFSKNLKLLLV
EIFRNHPEKSRMIIDYIRHVSRKKDPHNDERASPTSEVNTISQQNTNHGP
QARSPAPMKGHSGGSEGPGGSPGSSSGNSEFGSESNNNNSHGSMNNNNNN
HHHHHNHFHKKLLGKGGPGGGSDPETGFDDINIESLDFGDLPESNTNKWF
TEHPDINPAKVFDGINLKTEFPYPTDSKVEKPPDLTNLDNATANLLQMSV
PDPSTTFLDIGTDSSMYEDDPFNIEQLLPSNFNINQLDMGANATEQAMLA
HGTENSVNLAIGSSAKPIHLQPNHGHLGGHHHPVVSQHNGLHLKPHPHPF
PMHPPPHHLPPPPSIQTTASSIGLSLYPETTIRPVHIPHHHHHENMQANL
RSFIKSEPLPCIKREESSHPHEGMDTPYDRSSGMSPMSSMDSIGSPGSPP
SSSSLPLFASPHSRIPLPGSSGSMGGGHGHSNAHLSQMARKKAVGQEDED
LINIPSLQVRIKILQQRLGLTHETPVEIINGGHGIKNPLASDSPEALKLE
KLPAVRPESDPSKFQCRICSKIFKLQRLLNRHMKCHSDVKRYLCTFCGKG
FNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCLKVHGVTHNYE
YKQRRSKMYVCEDCGFTTKEPELHYLHLKEKHPYSPALLKFYDKRHFKFN
NSGFASMLLQVN
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mRNA from alignment at scaffold40_size501252:112222..115675+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold40_size501252-snap-gene-1.8-mRNA-1 ID=maker-scaffold40_size501252-snap-gene-1.8-mRNA-1|Name=maker-scaffold40_size501252-snap-gene-1.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3454bp|location=Sequence derived from alignment at scaffold40_size501252:112222..115675+ (Tigriopus kingsejongensis)
AGCTTGGTTTTCCGCCCGGATTACTCGAACATGTCACAATCACCCCCACA
AATGCCATCCGGACCCTGGCATCGCGGAAGGCTTACGATGAGCCCATCGA
CGTGGTCATCCGACGCAAGGAATCGGAGCGATATCACCCCTACAACCGGT
CGGCTTCCGCAGCAACCGAACCAGTTCAGGATGTGCCCATCAATCTGCAG
ATTCCCAGGACCACCGTGTCACCCCCACCTCAGTCCGAGCCGGTGGATTT
CTCCACCAAGAAGGAGCCCAAGGTCGCCTCCGAGGCGGAATCCAAGCCGA
AGAACATTTCCTTCACTTCAAGTAAGGAGTTGAGGTTCTCCAAGAACCTG
AAGCTTCTTTTGGTGGAAATCTTCCGGAACCACCCGGAGAAGTCCCGCAT
GATCATTGACTATATACGACATGTATCGCGGAAAAAGGATCCTCACAATG
ATGAGCGGGCCTCGCCAACCTCGGAGGTCAACACTATTTCCCAGCAGAAC
ACAAATCACGGGCCTCAGGCCAGGTCACCGGCCCCGATGAAAGGCCACTC
CGGAGGCAGTGAAGGTCCGGGGGGTTCTCCAGGAAGCAGCTCCGGGAACA
GCGAGTTTGGCAGTGAGAGCAACAACAACAACAGCCACGGGAGTATGAAC
AATAACAACAATAACCATCATCACCACCACAACCATTTCCACAAGAAACT
CCTCGGCAAAGGGGGTCCCGGCGGGGGGTCGGACCCCGAGACGGGGTTCG
ATGATATCAACATCGAGTCGCTGGATTTCGGAGACCTGCCTGAGTCGAAT
ACCAATAAGTGGTTCACGGAGCATCCGGACATCAACCCGGCCAAAGTATT
TGATGGCATTAATCTGAAGACCGAGTTCCCGTATCCCACGGACAGCAAGG
TGGAGAAACCGCCAGATCTCACCAACTTGGACAATGCCACGGCCAATCTC
CTCCAAATGTCGGTTCCCGATCCTTCCACCACATTTTTGGACATTGGCAC
CGACTCGAGTATGTATGAAGATGATCCCTTCAACATCGAGCAGCTTCTCC
CCTCCAACTTCAACATCAACCAGCTGGACATGGGTGCCAATGCTACCGAA
CAAGCCATGCTGGCTCATGGCACCGAGAACTCCGTCAATCTGGCCATTGG
CTCTTCCGCCAAGCCCATCCACCTCCAGCCCAATCATGGCCATTTGGGTG
GTCATCACCACCCCGTGGTGTCCCAACACAACGGCCTCCATCTGAAGCCC
CATCCCCATCCATTCCCCATGCACCCACCTCCCCACCACTTGCCTCCGCC
CCCGTCAATTCAGACCACGGCCTCCTCCATCGGTCTGAGCTTATATCCGG
AGACCACGATCCGTCCGGTCCACATCCCACACCACCACCACCACGAGAAC
ATGCAAGCCAACCTGAGGTCCTTCATTAAGAGCGAGCCGCTGCCTTGCAT
CAAGCGGGAGGAGTCGTCCCATCCTCACGAGGGCATGGACACGCCGTACG
ATCGGTCCTCCGGCATGTCTCCCATGTCGTCCATGGACTCGATTGGCTCC
CCCGGCTCACCACCCAGCTCCTCCAGTCTCCCACTCTTTGCCAGTCCCCA
CTCCAGAATCCCATTGCCGGGGTCCTCCGGCTCCATGGGAGGGGGTCATG
GGCACTCGAACGCCCATCTGAGCCAAATGGCCCGCAAAAAGGCAGTGGGT
CAGGAGGACGAGGATCTCATTAACATTCCCTCCCTTCAAGTGAGGATCAA
GATTCTACAACAAAGGGTAAGAAGTCCGGCCATATAGTAGGACTCCATTT
TGGGACTTGAGTGGGGAATAACTTTTCAAATATCGTCGAATAAGTGCCTA
CTTAAAAGAGGTAAAAAATCCTCGGAATCGGTCAATTCTCTAAGCACAAA
GGCTTGAAAAGAATTCTCATAAAAACACTTTTTTAACGTGATCAGGATTT
CAAAGGATCCTCCAAGAATCGAAAACTTCCAATACCTCCTCGATGCAACT
CGTGAGCGTGTACACAAGCTTTGATCGGAATACGGTCCTTGTACAGATAG
GTATATTCCATTGCTTTCCAATCTGGTTCCATTTTCCAACTAGTAGTTTA
TTTATTCCCGAAAATAATTGGCCAGTGTTGCCACCACTGCGCCAGCTAAG
TGCAAAGTGAACACCAAGTTTTGCTTTGGTGGAATTGCCAAGTGTTTGGT
GCACTGTGCAGTCCCTAAATAATGGTTGCTCAAATATTTGACACAGCAGT
TATTTGAAAGAGAAGAATCATTTAGTAAATGTGTTCCGACTTGAATGCTC
GAGGAAGATGAATCTCCGTTTTCACATGTCTAAAGGGAGCCTTTCCATTG
ATGATGTTCTCTTCTCTAGTTGGGACTCACCCACGAAACCCCAGTGGAGA
TAATCAATGGGGGTCATGGTATCAAGAACCCCCTGGCCTCAGACTCCCCT
GAGGCCTTAAAGCTGGAGAAGTTGCCAGCCGTCCGTCCCGAGAGTGATCC
GTCCAAGTTCCAGTGTCGGATCTGCTCCAAGATATTCAAGCTCCAACGCC
TCCTCAATCGCCACATGAAGTGTCACAGTGATGTGAAACGATATTTATGC
ACCTTCTGTGGCAAAGGCTTCAACGACACCTTTGACCTTAAGCGGCACAC
AAGGACCCACACTGGTTCGTATTTGCCCACATTGATTCGTAAGCTCCCGT
TCCTCGGTATTCAATGTCCCCTCCTCTCTGTCCCCTCTAGGTGTCCGGCC
CTACAAGTGCAATCTTTGTGAGAAATCTTTTACTCAACGATGTTCTTTGG
AATCCCATTGTCTCAAGGTACACGGAGTGACCCACAACTACGAATACAAG
CAGCGCAGATCCAAGGTGAGCTCTAGTTCCAATTGCCCTGAGAAATTGGC
GTGCTTATGGGTGATTTGGGAACTGGTTCTGGCTGTTGATGGGCCGATGC
AATTAATGTGTATCCACTGAGAGAGTGTAACTCATGGCTAGATGAAGACC
GGCCCGATGGAATGTGACATAATGACTCATCTCGCCCTTTCAGATGTATG
TTTGTGAAGATTGCGGATTTACAACCAAAGAACCCGAGCTTCACTACCTT
CACCTCAAGGAAAAGCATCCCTACAGTCCAGCTCTGCTGAAATTCTATGA
CAAGAGGCATTTCAAGTTCAATAACTCAGGATTTGCTAGTATGCTTCTAC
AAGTTAATTAATAGTGGCATGCCTACTCAGTACACAATTACTGTGTTGTA
GCGTCGTAACGAACTTTCGTTGCCGTGTAGAGCAAGCACTCACTGTGATA
AATATGTGTCCACCTTACATATTGGGTGGAGAGGCTGATATTAGACACAA
TTCTTTTCGCAGCGTCATCAATGTGACACAAACACACGAGTATTTGAATG
GAAAGAACATACCTCTGTGATATCTGGTCAACCACAACAACTACAACAAC
AACA
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