maker-scaffold41_size498431-snap-gene-1.21-mRNA-1, maker-scaffold41_size498431-snap-gene-1.21-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold41_size498431-snap-gene-1.21-mRNA-1
Unique Namemaker-scaffold41_size498431-snap-gene-1.21-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold41_size498431supercontigscaffold41_size498431:113303..115593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein LOTGIDRAFT_231752maker-scaffold41_size498431-snap-gene-1.21Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:exon:362maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:exon:362Tigriopus kingsejongensisexon
maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:exon:363maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:exon:363Tigriopus kingsejongensisexon
maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:three_prime_utrmaker-scaffold41_size498431-snap-gene-1.21-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold41_size498431-snap-gene-1.21-mRNA-1:cdsmaker-scaffold41_size498431-snap-gene-1.21-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1996405auto1996405Tigriopus kingsejongensispolypeptide
Tk00193Tk00193Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00193

>Tk00193 ID=Tk00193|Name=Tk00193|organism=Tigriopus kingsejongensis|type=polypeptide|length=390bp
LTKMTATPAYEVREINSDIGRGLFAARPLSQGEVIFRESPLVSSQFAWNV
AYHYSCCHFCLEPLETAQANVRRLTKNPNVEIPHPECCSTRLALHVQCPD
CQVGYCSQDCLRQAWHLFHKTLCRGVPECLEPEDSPWKSMVDIWKQMHYP
PETTSISLMARILASIVQAPDPGALTAKYLSFMHTTVSHKDEIAHKLLGD
GFVQQLEHLRCAMVPLFPQPILSQFLSPEGFLALFALVGRNGQGVATSPW
SQWVKNVEDLSLTEPLKTHANELIESLYEKLDEEVGSFLDNEGSGLYQLQ
SLANHSCVPNAEVQFSFNNHDLVVKAIQPIQPGEEILISYLDECLLSRSR
KTRNEVLRENYLFNCLCPKCQEQINDPEGTSEEEMSEEEG
back to top

mRNA from alignment at scaffold41_size498431:113303..115593-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold41_size498431-snap-gene-1.21-mRNA-1 ID=maker-scaffold41_size498431-snap-gene-1.21-mRNA-1|Name=maker-scaffold41_size498431-snap-gene-1.21-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2291bp|location=Sequence derived from alignment at scaffold41_size498431:113303..115593- (Tigriopus kingsejongensis)
CAACACTTTTGTTTCGATCAGCTGGGTGTGAGCCATGACGTCATTGTTAT
GACCTGGTCAGGGTGACGTGGCCAGCCTAGGCCGGTCTGATCGACGGACG
GCCTTTGTTCATGCGCAGGGTCAACCGGGTCCAGGCCCTGGCGACTCCCC
CCTCGGTCCCCTCCCCATGATATGTACCCCCATCGCTGGTCATAACCCGC
ATAAACCATGACAATTACCTGGACAATCCTCATATATAGAAGCTACTGGG
CAGTGGGACTGGCCTGATGCATGTGATCAGCACGTGTTGAGAAGACTTGG
GTGCCTTTTGATCTGACGAAAATGACTGCGACTCCGGCCTATGAAGTCCG
GGAAATTAACAGTGACATTGGTCGCGGGTTATTTGCTGCGCGTCCTTTGA
GTCAGGGCGAGGTCATCTTCCGCGAATCACCTTTGGTGTCGTCGCAATTC
GCGTGGAACGTTGCCTATCACTACTCGTGCTGTCACTTTTGCTTGGAGCC
TTTGGAAACGGCCCAAGCCAATGTCCGACGACTGACCAAGAACCCGAACG
TCGAAATTCCTCATCCGGAATGTTGTTCCACCCGGTGAGTATTCTTGTGA
GTCTGCTATAGGTCAAAGAGTTCAGAGAGCTCATATTTGTTTTCTGCTTT
ACTTAATTACCTCGCAATTTCGGCACAGAAAATATTGTTCTGGCTTCCAT
TTGAAAGTGTGCTACAGAAGTGCTTAGACGTTACATACAAAGCCCCTTCT
CAATGGCTCTCAAGTCCGTATTTGGCATACTTTCTGGGTCCTTACCAGGC
AATTTCCCCGTTCTTTCGTCAAAAAGTGTCAGGACCTGTTTCTACCCCTA
GTAGATAATGCCAACCAAGTCCTGGCATTTCTTCAGCCAGCCTTCAAATG
CTGATGAAGCTTCCATCCAGTCTAGGGAGCCTCGAGGTGCACGGTCTGGG
CGGATCTCGGACGCTCAGGTGTCCATTAAACAGCCGAATTTTCCATCGAT
CATTGAGATTACTTGATCGAGAAAGTCAGGAGAGAAGAAAGGGCTTTTTC
ATGGTTCAATGGGCTTATATAAATATCTAACTATCTAATGCGTTGTCTCA
CTCTCGATTCAGATTGGCTCTTCACGTCCAGTGTCCGGATTGCCAAGTCG
GCTACTGTTCCCAGGATTGCCTCCGCCAAGCCTGGCATCTGTTCCACAAG
ACCTTATGCCGGGGTGTGCCCGAGTGTCTAGAGCCCGAGGACTCTCCGTG
GAAGTCCATGGTGGACATTTGGAAGCAAATGCACTACCCACCCGAGACCA
CTTCGATCAGTCTCATGGCCCGCATCCTGGCCTCCATCGTCCAAGCACCC
GATCCTGGGGCGCTGACGGCCAAATATCTGTCTTTCATGCACACTACCGT
GAGTCACAAGGACGAAATCGCTCACAAGCTCTTGGGTGACGGCTTTGTTC
AGCAACTGGAACACTTGCGCTGTGCCATGGTGCCGTTGTTCCCGCAGCCG
ATTTTGTCCCAGTTTCTTAGTCCGGAAGGGTTTCTGGCCCTTTTCGCCTT
AGTGGGACGCAACGGCCAAGGTGTGGCCACCTCGCCTTGGAGCCAATGGG
TGAAGAATGTCGAGGATCTTAGTCTGACCGAGCCGTTGAAGACCCACGCC
AACGAGTTGATCGAGTCGCTGTACGAGAAACTGGATGAGGAAGTCGGTTC
CTTCCTGGATAACGAAGGCTCTGGTTTGTACCAGCTCCAGAGCCTGGCCA
ATCATAGTTGCGTGCCCAATGCCGAAGTGCAGTTCTCTTTCAACAACCAT
GACTTGGTTGTGAAGGCCATTCAACCCATCCAACCCGGCGAGGAAATTCT
CATATCCTATCTGGATGAATGTCTCCTGAGCCGAAGTCGGAAAACCAGGA
ACGAAGTCCTCCGGGAGAACTATCTCTTCAACTGCCTCTGTCCCAAGTGC
CAAGAGCAAATCAACGACCCGGAAGGAACCAGTGAAGAGGAAATGTCTGA
AGAGGAAGGGTGACTTGTCTTCAGCTCACTGGCATAGAATCATACAACAA
GGCAAAAGCGATAGATTGGCTCTAAAAAGCCTATCCATGGAGTTCCAAAC
TGAATCAATACTAAAGAATGAAAGTCTCTTGGGGGATTCCACGAGCAAGC
ACACTGCGTACATGGTTTTGATTTATATTTTTTCCGAGGGATTCTCACTA
GCTCATGCTGAGGTGTGCATTTCCAACAAGCCTGATTGTATTTGTACCGT
AGCTCTCCTATCCAGTTTCGTTTGCTCCATTAGGCCGTGTG
back to top
Add to Basket