maker-scaffold490_size156733-snap-gene-0.20-mRNA-1, maker-scaffold490_size156733-snap-gene-0.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1
Unique Name	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold490_size156733	supercontig	scaffold490_size156733:8724..20958 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
conserved hypothetical protein	maker-scaffold490_size156733-snap-gene-0.20	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:13	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:13	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:14	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:14	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:15	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:15	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:16	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:16	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:17	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:17	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:18	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:exon:18	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:three_prime_utr	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:three_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds-1958405	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds-1958406	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds-1958407	Tigriopus kingsejongensis	exon
maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds	maker-scaffold490_size156733-snap-gene-0.20-mRNA-1:cds-1958408	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1958409	auto1958409	Tigriopus kingsejongensis	polypeptide
Tk04106	Tk04106	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold490_size156733:8724..20958-

protein sequence of Tk04106

>Tk04106 ID=Tk04106|Name=Tk04106|organism=Tigriopus kingsejongensis|type=polypeptide|length=578bp
MTSSGFTLPRWLGSGKKKRPKSMHDLAAIQDRALPPLPPKPAPRVAPCSG
RESPAFQPLPPRTGPILPDAGPDLRAEDILTARHRLRKTQSCAQGLASEA
SWLQRLNPPDPERGGDTFSPDDVFLDPAPGFLGPLMPVYANEWALPRSLR
PSELSLKSFQLSNPSSSQSGSWVFNPPDSYGRIPENYPYDVTVTRRENEG
FGFVIISSVSRAGSTIGRIIPGSPAERCGRLHVGDRILAVNHVDINSLHH
GEIVNLIKDSGYSVVMTVGPPIDDTSSNASTSHRGYNPNSHQVPPHSGSS
AYTPQGGSHPSQPSNSNHPGYPSGPLPPAHMENFHQEDQELNMLELDDQY
YAVELQRGARGFGFSIRGGREFHSMPLFVLRIAVDGPAAADGRLRVGDQI
IEINGINTKNMTHGEAIELIKSGGSMVRLLVRRGKMPPTALMEQVGLSPL
SPTPTVSMSAMGRPISAMSQPSHTMMSNNNYNHFNGGGPNNNYANGYLPQ
HQQQAQPSVNGMVPTPFTTASAISNGHLNGPMGHSSPRMQFPLNQGGGSS
AEQYNSWYHSQQQQQQSQQQPQMYHHHH

mRNA from alignment at scaffold490_size156733:8724..20958-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold490_size156733-snap-gene-0.20-mRNA-1 ID=maker-scaffold490_size156733-snap-gene-0.20-mRNA-1|Name=maker-scaffold490_size156733-snap-gene-0.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=12235bp|location=Sequence derived from alignment at scaffold490_size156733:8724..20958- (Tigriopus kingsejongensis)
ATGACTTCCTCGGGTTTTACGCTGCCCCGCTGGCTGGGCAGCGGCAAGAA
GAAACGCCCCAAGTCCATGCACGACTTGGCCGCCATCCAGGATCGCGCCC
TTCCGCCACTTCCCCCCAAGCCGGCTCCCCGAGTCGCACCATGTTCGGGC
CGCGAATCGCCGGCTTTCCAGCCCTTGCCCCCGCGTACGGGCCCCATCCT
GCCTGATGCCGGACCGGACCTCCGCGCCGAGGACATCCTGACCGCCAGGC
ATCGCTTGCGCAAGACTCAAAGTTGTGCCCAAGGGCTGGCTTCCGAGGCG
AGTTGGCTTCAACGCTTGAACCCACCCGATCCGGAGCGCGGTGGCGATAC
CTTCTCCCCCGATGATGTGTTCCTGGACCCGGCACCCGGCTTCCTCGGTC
CGCTGATGCCGGTGTACGCCAATGAATGGGCCCTACCCCGCTCTCTCCGG
CCCTCGGAGCTGAGTCTGAAGTCTTTCCAACTGTCCAATCCCAGCTCGTC
GCAAAGTGGGTCTTGGGTGTTCAACCCACCAGGTAGGGTCGTAGCTTCGT
AGTGAACGACGCACCGTAGCTCAACCTCTCCAGTCTGAACCCTTGTCCAA
TTTCACCCGGTCTGAAAAATATGACGGGGCTGAGACGTCAGGGAGCAGTA
GTCGAGTACCAGCGGGTAGACCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGCACAGCTACAG
AAGGACAATGTCTGGCGGGCTTCCATCTAATTTGATTTGGTGGTAGAAAG
GCATCCAATAATGGAAGCCCTCGAATCCACTTCACTCATTTGGTGTCTTT
TGGTCTCATTTTCAGATAGCTACGGTCGCATTCCCGAGAATTATCCCTAC
GACGTGACCGTAACCCGCCGAGAAAACGAGGGATTTGGCTTTGTGATAAT
CTCTTCTGTTTCACGGGCGGGTTCGACCATTGGCCGCATCATCCCGGGCT
CGCCGGCCGAGCGCTGCGGGCGTCTCCACGTTGGTGACCGCATTCTGGCC
GTCAACCACGTGGACATCAATAGTCTACACCACGGCGAGATCGTCAACCT
GATCAAGGACTCTGGTTATTCAGTGGTTATGACTGTCGGACCTCCCATAG
GTAATAGACGAGCTCTAAAGACACCCGTAATTTTTTAAGTGACGTACCAC
ACAATTGGCGAGTTTTCTGTTTTTCCAATTCCACTAGTGCAGATTGAGTT
AGGAACCTCTGGAATGAACATGGAAGTAGTAAGGATTCCCTTTGGAGAGT
GCTTTCGACCTCGATTTGGGACGAAGGTTTCGTTTCCGACCGACGGGGGG
GAAAGTCGAGGCAAATTTTCTCAGAAAAAAACCAGCCACACTTCCTTCCA
ATATCCACTCCGTAATGCGTCCATATTTAGTCCCGATGTCCATGGTTGAG
CTTATTACCCCAGCAGTGGTTCAATTTGGTATTCTTTCGGAGCTTTTGTC
TCATTTTTCAACAACGCGAGTTGGCGGAAATGCATTAACACTTTTGTTGG
AGAGAAAAAAAGAGACATGGGAGGGACATACCATTGTCCAAGGCAGGCGG
AAAAGAGTTTGTGTACTTCCGTGCTCCGGCAGCGTTTCACCATTAAGGAT
TTACAAGTTCTGCACTTGTTTGCAAATCCCTCCCAACCAAGTTCCAAACG
TATCCGAAAGCAAGCCCATAGAGCTGATTGGCCCACCAACCAAGTTCCTG
GCCAGGCTATAATATGTGCTCCTTCATTTTTTTCCAGACGACACATCGAG
CAATGCATCAACATCCCACAGGGTAAGAATTGCTGGCCAACTTTTGTCAT
TCGCCAGTTATTGGCCACTCGTGAGAGGAATTTGTAGCATTTTTTGTGCC
TTCCTTGGTTGTGCTTTTATGTTGCCTCGCTCTCGGGTGCGTGTTTGTGT
GGCTTTTTTATTTTCCCTCTCTTTAGTGGCTCTAATTTCTTCGTCATCTG
GCTTGTCCCTCCCGGATATAATGGGCCAATCGACCATTTTGGTGCACCTT
TTACCATCACCGCGACTTTTCCTTGGTTTCTCTCTCCCTGCTCCCGATAG
CAATCTCATTTTATGTATTTTTTGTTGTGCTCATTTTTGGTTTTGTGTTG
TTTTCCTGTAGAGTTCCACCAGTTCCATGGTAACTGCTCAAGCCATGCCC
ACAGTTTTACCACCCACCGATTCAGCTGGAAGCTCTGTCCACTCCAACAA
TGTAGACCCAAGGTATAAAATGAATTTTCACCGCCCTCCAATTTTTTTAA
CACCTGTTTTGTTTTGGTCGACAAGGATTTTCACACAATTCCTTGCGCAG
GGAAGCTCGCCAATTCTCCAATAATGGGTTTTTAAAAATTATTCACCACG
AGCCAGCAGATTTAGGAAATGGAACTTTGTCTAGTTCTTGGGAGTTGGAG
ACCGTTCCACTAAAAGTTTTCCACTTTTTCAGAAAGCGATAAATTATCAG
TTTCCAGCTTTGAACTTTTCAAAAGGTTTTGCGAAACTTTCCCAAGTCCT
AGGTGAAAGTGTCGGTCACATTTCAGCCGGGGACTTATTCCCAAACTCCC
TCTGCGGGTCAGTATAGCAGTACATATACAGCAGTAAATATTGATGTAGC
TAACAAGGCATGATAATCAAATAATTGATTATGCAAGGAGTCTGTTGTCC
GTCATCTCTTTCTCCAAGTTCACCAATTACAAAGATATTTCCAAACAGTT
ATCAGTTTCCCACAATTGTTGGAATATTTCAGATTATATTTTGATTATTT
AAAGAGAAGCAGACAACCTTTTTTATGTGTCTTGTCTCTTTGTTACCGTT
TTAAGCGGAATTATTTCACCGAAACAGTCGTACGTATTAGTAATGGGCTT
CCAATTTTGTTTTTCGTTCGAATACGAGTAATAAGCAAGATATATTAAAA
ATTCAGGCAGTATCATTTGGCATCGACCCCAATGCGTGTATTCCCCCATG
GTGTTCAACTTGTGCCTAACTGAGTGACTAACCACAATTTATCTCTCTCT
TCTCTCCTCCATCCATCCTCACCTTCGTTCCGTCGGCTCTTTCTCTTGCT
CTTCTTGAACGAACCCCCGACCTTCAGGTCTGTTTCTGTGGGGGCGCTTC
CTACCTACCCCAACAGCCAATACAACAACCCCCCTTCACAGGGGTACAAT
CCCAACAGCCACCAAGTTCCTCCTCATTCGGGGTCGTCTGCCTACACCCC
CCAGGGGGGCAGTCACCCCTCGCAACCCTCCAATAGCAACCATCCCGGAT
ATCCATCGGGACCTCTGCCTCCGGCTCACATGGAGAACTTTCACCAGGTA
TTGATTTTGCATCCAGACCGGAAACAACGGAACAGGAAGTACCAATATGT
ACCCGTGGGTGATGGTGTTTCATAATATCCTTCTACGAATACTGTCCCGT
CACCTGTAGACTTCACTTGCATGCCATTGTGTTTGGGGGTGGGATATTTT
GGATGGGGCCATGCCGAAAAGGATTGACGAAGATTTCGGATTGCCGTCCG
AAAAAACGTGTTTGGTAATGCAAGCATTTGAATGCAGACGAAGGCGCGAC
TTGAAGACGTTGATTGTGGCCTCGGAATGTCACTTATCACTCCTGGCAAC
GTACTGTTCCATTTCAAGTTATAAAAGGTCCCCCAAGGCCACTCTTTCTC
GAAGTTCATGTCCATGACAAAGGCCAGTAGAGAGTCGCTCATTCGACCAC
GATTGCCATCATGAAAAAGCGGCCATGTCCGCTTAACACTTCGGGCCATA
AATTTTAACCTCTCGAAAAAAGTATTAACCCTCTCGTTTTCCTGACTTGT
AGGAAGACCAAGAATTGAACATGCTTGAGCTCGACGACCAATACTATGCC
GTGGAACTTCAACGAGGTGCTCGCGGGTTTGGCTTCTCCATTCGGGGAGG
TCGCGAGTTCCACTCGATGCCTCTGTTCGTCTTGCGCATCGCCGTGGACG
GGCCAGCGGCCGCCGATGGCCGTCTGCGGGTCGGCGACCAGATAATCGAG
ATCAACGGCATCAACACTAAGAACATGACCCACGGGGAAGCCATTGAATT
GATCAAGAGTGGGGGATCCATGGTCAGACTGCTGGTTCGCCGAGGGAAAA
TGCCTCCCACAGCATTAATGGGTACGTTCTGTGACAAGTGGAGTAACATT
GGAGATGTCCAAGGCCCAAGCCAAGGAATGCTTGATTAGGTTGAATGTCC
AGGCAGCTTGTCTTTGTTCTTATCAGGGAATGCTAATGCTAGATGAAGCG
GAATGTCTACGTAGCTTCTTTTAGTGCTAATTTAGGCCAGAAATGGCCTA
ATTTCTCTGAGTAAGATGTTCCGTGTTGAGATCGACTGGAAGCTACGATT
TCTTGGGCCTAAACTAGAACTAAAACAGGCTGGGGGTCGTTTCAATAAAT
CCAGCGTTCCTTGCCTAAGCCATCGATTGCTACATCGTCACCTGCACTAA
TTTGTTTCAATCATTGTGCAGTAAAAGTTGTAGAGTGATTCATGTAACTT
ATTCACCAGGTTTTGTGTTTGTGTGTGTTCTTGGATTGTTCTAACCTTGA
TGCAGACACGATGATTATAGGAAAACATGAATACTGTCTGGCATGGTCGC
AAATGGTACAAAATGTCAGACTCCACAAGTGCATCAAAATAGAAGGGATA
CTAATTATTTTTTGAAGCAACTCTTCGGACTAATACATGGTACACACGCT
CTCGAAATAATAGGTACCAATAATTGTGAGCTGAGGATAACATCTGATGA
CATTGGATAAGACAAAGCCTGTTTTTTATCAAAGCAATTGACAGATAAGC
AAATAGCAAAGTTGTGAGTTCCTTTTCCCATAGTCCATCTGCATCCATTT
CAAAAATGATAATGCTCTCTATTTTTAATGCTTCGCCTAGATAAGTAGAG
CTTGTGGTAGCGCGTGACCTTTTTTAATGGCTGTTTGTAGCTTGTAAAAA
TGCTTCGTGTAATGTGATTTTAAAGCAAAGTTATAAATGTGACGTTAATG
ACTGGTAATACGTGTAGTATAATATTGATGAATGATAACATGGGCACGAC
TTGTGTAACTTTAAAATGTTTGATAAGAAGAAAAAGTATTCGTGCTAACG
TTTGGTTCCATTTCCAGAACAAGTTGGTTTATCGCCATTGTCACCCACAC
CCACCGTGTCCATGTCAGCCATGGGTCGGCCCATCAGTGCCATGTCACAG
CCTAGCCACACGATGATGTCCAACAACAACTACAACCACTTCAATGGAGG
TGGTCCTAACAACAACTACGCCAACGGTTATTTGCCACAACACCAGCAGC
AGGCACAACCGTCGGTCAACGGGATGGTGCCCACCCCATTCACCACCGCC
TCAGCCATTTCGAATGGGCATCTCAATGGGCCCATGGGCCACAGCTCACC
TCGTATGCAATTCCCACTCAACCAAGGGGGTGGCTCCAGTGCCGAGCAAT
ACAACAGTTGGTACCACAGCCAACAGCAGCAACAGCAGTCGCAACAACAG
CCACAGATGTACCATCATCATCATTGAGTTGAGCGTGAAGCACCCTTTCG
CTCTTCAATCGGGATTCCAACCTGAGATTAATAATTCTGACCTGCTCGGC
CCGTGATCAAGACGACGATGAAGTACAAAGCCCAAAGCGAGGCCGAGGCC
AATCAAAACCCACACTCGAGGATGACCCTGGGCGAGGGATGCTGACGATT
TCATTGAACGCAATACGCATATATAAGTATATATTTTTCGACCCCATGGA
TGAGCTTGACAGACCCAATGGAAGAGGAAGAAGCAGCAGCAGCCATGATG
AAAATCGCCCTCTGTCTACATTTATATTCTTGTAAAGATGGAAATTGGAT
AATGCACATTATCACCATTCTATGCCGATATGATGACTTTTTGTCTTTCT
TACTCAATTTGTAGCGGAAACAGCCTATTTAAGAAGGATGTCATTGACTA
TTTCGCAAGAAATATGAGAATTGCAGAATAAATGATCATTATAATAGACC
CTGAAATCATTTCCTCCTTGCAACCTCGATCCTCA

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