maker-scaffold546_size140615-snap-gene-0.31-mRNA-1, maker-scaffold546_size140615-snap-gene-0.31-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold546_size140615-snap-gene-0.31-mRNA-1
Unique Namemaker-scaffold546_size140615-snap-gene-0.31-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold546_size140615supercontigscaffold546_size140615:105864..108700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
tripsin maker-scaffold546_size140615-snap-gene-0.31Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1543maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1543Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1544maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1544Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1545maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1545Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1546maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1546Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1547maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:exon:1547Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsmaker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsmaker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cds-1994976Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsmaker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cds-1994977Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsmaker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cds-1994978Tigriopus kingsejongensisexon
maker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cdsmaker-scaffold546_size140615-snap-gene-0.31-mRNA-1:cds-1994979Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1994980auto1994980Tigriopus kingsejongensispolypeptide
Tk00840Tk00840Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00840

>Tk00840 ID=Tk00840|Name=Tk00840|organism=Tigriopus kingsejongensis|type=polypeptide|length=486bp
MTSTSRSVLYSHLGLVWLFIATSPYLLMNGAQARLSTLNLFSIPQDKWDY
KSCEGKNGSTGVCVHSMACTFSGGEHLGICRDRFYFGSCCLVSKISSSLP
NEPTAAPPEEPTSVSTQPSSSSATSESTSLVPSEPTHSSTEDSLDLELMV
LGNSTISNEISQEEDFDMDYDGHDEAGKCCSESCAPELTSNIQGFSILAD
VVCGIRSQLSPARMFKGLGRRSRIVGGDPSEFGAWPWHVALEVKYPAGRT
KHRCGGVLLNSRWVATAAHCVHVYSENDLSLRLGDYDKTDSAFEPLPYIV
RDVSSIYEHEDFDPLTYEYDIALVYMKKEVPFTEHISPICLPEANLANLE
GSKAYIAGWGTLFEGGPKPDRLQEVSVPVIGHKKCMEIFKLAGLEEKLTD
VFICAGFEAGGKDACEGDSGGPLMIQQENSNRWTLAGLISWGNGCGERNQ
PGVYTNVFKFLDWIRQTMSDQRNIISRRRKKMRRRG
back to top

mRNA from alignment at scaffold546_size140615:105864..108700+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold546_size140615-snap-gene-0.31-mRNA-1 ID=maker-scaffold546_size140615-snap-gene-0.31-mRNA-1|Name=maker-scaffold546_size140615-snap-gene-0.31-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2837bp|location=Sequence derived from alignment at scaffold546_size140615:105864..108700+ (Tigriopus kingsejongensis)
ATGACTTCGACCAGTCGCTCTGTTTTGTATTCGCACCTGGGTTTGGTGTG
GTTATTCATCGCCACCTCGCCGTACCTTTTGATGAATGGAGCCCAAGCCC
GGTTATCAACGCTCAACTTGTTTAGCATTCCCCAAGGTAAGGTGAAATCC
TTAAATGATTTTTGGGAGCAGCATATTTTGGACTAAGCATGACGGTCGAG
GCCAGCCAGAAGCAGTCAGTCATCATCGTGTTTCTGTCTTGGATGGTTGT
GGGCGTTTGGAGCAGGATTTTCTACATGTCTTTCGGTCCTCATCGCCGAC
TAGGACTGTCATCTCCTGGGCTAAATACTGGGAAACCGTCAATTTTGTGT
GGGGTTCAGCTCGATTTATGGTTTTGGGGAGTGCATAACGCTCTGGGCTC
TGACCACGTTGAACGAGGCACAGATAATCCTGGACTAGCTTTTCTGAATT
TTGCATCAACATGTACTCTTCCTCCACTCGTCCCATGTCGAATGTAGCCC
TGGGCACTGTACTATACGTGGTCTCGGGATGACCAAGGGACAGCATTGAG
AAGGGAAGACTTTGCCACAGAATGACTTGACATTGGTTTAACTGACTCAG
CCAGCTAAAAGCAGTGGATGAATTGGAAATGTTTAGTGTCGTTGCCATTA
CTCACTAACATTCCCGAAAACTCACGTACCGTACAGTATATGGGTGAGGG
TGGAAACCCTACTACAATAATTCGACTCGAAGTCTGTGTGATTGTGTGCC
TGTGTGACTGTGTGACTGTGTGACCGTGTGACTGTGTGGCTGTGTGACTG
TGTGGCTGTGTGACTGTCGGACAGCCAGACAGTCGGACAGCAAGACAGTC
ATACAGTCATACTGTCGGACAGCCAGACAGTCAGACTGTCGCTCTGCAAT
TAATCATGCCCTTTATTGATTGCAGATAAATGGGACTACAAGTCCTGTGA
GGGCAAGAATGGCTCCACGGGAGTGTGTGTCCACTCGATGGCGTGTACCT
TTAGTGGGGGCGAGCACCTTGGCATTTGCCGGGACCGATTCTACTTTGGT
AGTTGTTGTCTGGTCTCAAAGATCTCCTCCAGCCTGCCCAATGAGCCCAC
GGCAGCCCCTCCTGAAGAACCCACGAGTGTGTCAACCCAGCCGTCCTCAT
CTTCAGCCACATCGGAGTCCACCAGCCTCGTTCCCTCGGAGCCCACCCAC
TCATCAACTGAAGACAGTCTGGACTTGGAATTGATGGTCTTGGGCAACTC
CACCATCTCTAACGAGATTTCGCAGGAGGAGGATTTTGACATGGATTATG
ACGGTCACGATGAAGCTGGTAAGTGCTGCTCTGAATCCTGTGCCCCTGAA
CTGACATCCAATATACAAGGTTTCTCCATCCTAGCCGACGTGGTGTGTGG
CATTCGATCCCAACTCTCCCCGGCCCGTATGTTCAAAGGCCTGGGGCGGA
GAAGCCGAATTGTGGGCGGGGATCCCTCCGAATTCGGGGCTTGGCCTTGG
CATGTGGCCTTGGAAGTCAAGTATCCGGCGGGCAGGACGAAGCATCGCTG
CGGAGGCGTGCTTCTCAACAGTCGTTGGGTCGCCACGGCAGCTCATTGTG
TTCACGTGTGAGTTGGGAATTACCAGAAAACTAGGGCATGGGATCATCGA
AGTAGGGCTGCGCCTGTCTGACCTTGGTGGACACTAATGGCTGCTAACTA
GGACGGGAGGAGACCATGAAAGTCTTGATCGGGATTGACATTCGATTTAT
TGCAGCTACTCGGAAAACGACTTATCGCTTCGCCTCGGGGACTATGACAA
GACAGATTCCGCGTTCGAGCCCCTGCCCTACATCGTGCGAGATGTGTCCA
GCATTTACGAGCATGAGGACTTCGATCCCTTGACCTACGAATATGATATT
GCGTTGGTCTACATGAAGAAGGAGGTGCCTTTCACTGAGCACATTTCGCC
CATTTGTCTCCCTGAAGCGAATCTGGCCAACTTGGAAGGCTCCAAGGCCT
ACATTGCTGGCTGGGGCACATTGTTCGAAGGTGAGGACCAGATTGGCGAC
TGCACTCAATCACGGGACAGATGTGAACGCTGATGCACTGGTTTGAGAGA
TTGGTCAACTTGATCAAGTCCACGGCTCTAGTGCGAAGTAACGATTGCTT
GTGTGTGTTTACACATTCCCGTCTCAAAGCCCGGTTTCTTTCAAAGTAAC
ACAAAAGGATGTGTTTTTTTCGATCGCAAAACCGGCTTTGATGACAAAAA
CAGGTGACAAGTGGTGATGATGTCCTTGGCAGTACTTTCTTGAACTTCTT
GCCGATTCCAGATAAAATGCTTTAGTGGAGTCTGAACGAGTTAGTGATCT
CCTCGTGTCTCTCATTCTATGTCGTAGGTGGACCAAAACCCGATCGCCTT
CAAGAGGTGTCCGTTCCCGTCATTGGACATAAGAAGTGTATGGAAATCTT
CAAATTGGCCGGACTCGAGGAAAAACTCACCGATGTGTTCATTTGCGCTG
GATTCGAGGCAGGCGGCAAAGATGCCTGTGAGGTAATCTTAACGACCACC
GATCGACCATGTGTCCTGATAACCTCCCAACTCTGCGATCCCTCTCTTTA
ACGCCTTATACTTGACAACTTTAGGGCGATAGTGGCGGTCCTTTGATGAT
CCAACAGGAGAACTCGAACCGCTGGACCTTGGCCGGTCTCATCAGCTGGG
GCAATGGCTGTGGAGAGCGGAACCAACCCGGGGTCTACACCAACGTGTTC
AAGTTCCTCGACTGGATCCGCCAGACAATGAGCGACCAACGCAACATCAT
ATCCAGACGGCGAAAAAAGATGCGACGACGGGGTTGA
back to top
Add to Basket