maker-scaffold556_size137522-snap-gene-0.37-mRNA-1, maker-scaffold556_size137522-snap-gene-0.37-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold556_size137522-snap-gene-0.37-mRNA-1
Unique Namemaker-scaffold556_size137522-snap-gene-0.37-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold556_size137522supercontigscaffold556_size137522:124444..127668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
chitotriosidase-1 isoform x2maker-scaffold556_size137522-snap-gene-0.37Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:387maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:387Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:388maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:388Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:389maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:389Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:390maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:390Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:391maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:391Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:392maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:exon:392Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:three_prime_utrmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cds-1998447Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cds-1998448Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cds-1998449Tigriopus kingsejongensisexon
maker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cdsmaker-scaffold556_size137522-snap-gene-0.37-mRNA-1:cds-1998450Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1998451auto1998451Tigriopus kingsejongensispolypeptide
Tk02043Tk02043Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02043

>Tk02043 ID=Tk02043|Name=Tk02043|organism=Tigriopus kingsejongensis|type=polypeptide|length=478bp
MKSSISPNFETFPLQLNIATNTVGASCKMIGGQICVPSLLTAALLVLGAS
RSRAQSTDEHNKTVACYFENWSFYRPSPVKFDIDSIDTSLCTHGIYVAAD
IDNSTWTIFAADPWYDLAPADCEPGYCNYDSYRRFTALQDDNFTPILSIG
GWTSSPTKFSTMARDPIKRGIFVDSVLPFLFTYGFGGMEIRWEFPGQGIG
SHPDDKIHFSKLVADLKKKLSLEDMTLMVSINVQLNETDVGYDFEDLSQH
VDFFNLATFDFNFFSDSRNYTGHHAPLMGRVEESEEDHPGFQNNVVEGVN
LVMDRGAPAEKILLGIAGQARGFTLEDVESDGLYCPAAAPNPAGPFTAIP
GYWAYFEVLEAMTADELPLLPEATPQAWHIVRDDCILAPYMTNGPYWIGY
DDPISVGIKSRYAKFAQLGGVVFSSLDGDDFKGLYSRPYPLLSEINRQLA
TGDDFDPNNFECGVDAAPICDVFEFFDY
back to top

mRNA from alignment at scaffold556_size137522:124444..127668-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold556_size137522-snap-gene-0.37-mRNA-1 ID=maker-scaffold556_size137522-snap-gene-0.37-mRNA-1|Name=maker-scaffold556_size137522-snap-gene-0.37-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3225bp|location=Sequence derived from alignment at scaffold556_size137522:124444..127668- (Tigriopus kingsejongensis)
ACGAAAAGTCCCACCTCCATGCTAAAGTTTCTGGTTCATGGCCTAAAAAT
TAAACCAGGAAATCGTCAGGAGGATGAAGTCTTCAATTTCCCCAAATTTC
GAAACTTTTCCGCTCCAGCTCAATGTAAGGTACTTCGCCGGCGATAGGGG
TCCCTTTGTTCCCAGGGGGGTCGTGCAGGAGCTCTTAGGCTCCACAGAAA
AGTTCCCAGCGCTCTGTGCCTGCTCCAACAAGAGCTACACTGCAGCCACT
GGCAATGTGCTCTCCGAATACGGCTGGGTGAGGGCCGGCTTGGGATACAA
CTAGAGCAAGACGAGTTCAAACAAAGTCAATCTGTGTAAATTCTCATTTG
GCTAAATTTGTCGACCTGACTTTGGGCACCCCTTTTGGGGGTCCCCATTT
TGCGAGGCCAAACAAAAAGTATTCCAAGTCGCTCATGTGCGTTGGGTTTT
TTCAGATGGGATTAACAAAGGCCGTATTACAATCTAAGCAAATACAATGC
ATCCATGCTAGATAAGACGAATCAACTTGTGACCTCACTCAAATTATCTG
TTAGATTGCCACCAACACAGTTGGAGCAAGTTGCAAAATGATCGGGGGTC
AAATTTGTGTTCCCAGTCTCCTGACTGCTGCCCTTTTGGTCCTCGGCGCT
TCCAGATCCAGGGCCCAGTCCACCGACGAGCATAACAAGACGGTGGCATG
CTACTTCGAGAACTGGTCGTTTTACAGGTACCACCCAACCAATGGCTCCC
AGTCACAATATTAGCGAGTGGGCACTAATCCGCATTCTTTTCCTCCCTCT
GCGCTGTTGTCCATGCTCAGGCCCAGTCCTGTCAAGTTTGACATCGACTC
CATCGATACGAGCTTGTGTACCCATGGAATTTATGTTGCAGCAGACATTG
ACAATTCCACTTGGACCATTTTTGCCGCAGACCCGTGGTACGACCTGGCA
CCAGCCGATTGCGAGCCAGGATACTGCAATTATGATTCCTATCGACGATT
CACAGCCCTCCAAGATGACAATTTCACACCCATTCTCAGCATTGGTACGT
CACAGGGGAGCTAGGATATACACACGTTTGGCACAAGCTTGTGGGCAGGA
GTGCGACATGCTGTCCTGAAGCAAATATCATATGATGGCCCCAACCAAGT
GAGAGAGTCCCTCGTAACTCATGAGCTGTCCATCGAGTATCGTTGCCTGT
CTGACACAACGTTAGGGCTAGAGCGAACAATCAATTGCAGCGGAATTCGA
AAAAAGGTTCTCAGATTGGTGTGAGTACACTTTTTTCAGTATCATGCTAG
GAATTAGGTTGAGCTCATTTTAAATGAATTGGCAGCTACAGCATAGTGTT
GGTGATTCCTCGCCAGAGATCATTCAAATCGTCCCGATGTTTAATGGAAC
ATTTAGAAAAGAACGCTATTTCACTGGAGTTAGCAAAAGTCCATATATAA
CCAAAGTCCCGACACTCCCTTTTTTTGTTGTGGGCCGTTTGTCAGCAGAC
TCTCACGTGACAGCCACTCATTGAGAAGAGAGGGAGGATTTTGAGGGTGC
TATACTGTTGTGAGCCAATCATGTCGAGACCGTTCATCAGCTCCATGAAA
TAACTGGTTTGACTGGCTGGACTTTGGGTAAACAGAGAACTTTAGAGTTA
GTTAGAAAGAGAGAGGAAACGGAAGCATTAGTGCCTTTCAAGTTTGTATC
GGAAACTACAAAACCAGTATCGCTCAACCTCCAAGAAACGAATACCAAAT
TTCGATTAAATAAAATTAGATCCACACTTGGAACTCCGACAATAGCGTTT
TCTCAACCTGTACACAATAGGCGGATGGACCAGCAGTCCAACGAAGTTCT
CTACTATGGCCCGGGATCCCATCAAAAGGGGTATCTTCGTGGACAGTGTG
TTGCCCTTCCTGTTCACCTACGGATTTGGTGGGATGGAAATTCGTTGGGA
GTTTCCCGGCCAAGGCATTGGCTCCCATCCCGATGACAAAATTCACTTCA
GCAAGTTGGTGGCCGATTTGAAGAAGAAGCTGAGCCTGGAAGATATGACC
CTCATGGTGAGCATAAACGTCCAGCTTAACGAGACCGACGTGGGTTACGA
CTTCGAGGACTTGTCCCAACACGTGGATTTCTTCAATTTGGCCACATTTG
ACTTCAATTTCTTCAGCGACTCGAGAAAGTGAGTCATTGTTTGCCATATC
AGTTCTTGTTTTGCGAGAGTTTGTGTTGAGCCACTAAGCTCGATCATAAT
CTGTTCCCATAATCCGGACTTGAGGAATCTTGTTTTCTTAGCTACACGGG
TCACCATGCCCCTTTGATGGGCCGAGTGGAGGAATCCGAAGAAGATCATC
CCGGGTTTCAGAACAATGTGGTTGAGGGAGTCAACTTGGTAATGGACAGA
GGTGGGAAAATGACTAGCTCGTGTGACTGAGCTGAGGGCCTCACCATCAT
GGGTATTCATGTTCAATTCAGGTGCACCAGCGGAAAAGATCCTTCTGGGC
ATTGCCGGTCAAGCCCGTGGCTTCACACTGGAAGATGTCGAGAGCGATGG
CCTCTACTGCCCGGCAGCAGCACCCAATCCTGCCGGACCGTTCACGGCCA
TCCCGGGGTATTGGGCCTACTTCGAAGTGCTGGAAGCCATGACAGCCGAC
GAACTTCCCCTCCTGCCCGAGGCCACGCCTCAAGCCTGGCATATCGTCCG
AGACGACTGCATTCTTGCCCCCTACATGACCAATGGCCCTTATTGGATCG
GGTATGACGATCCTATCTCGGTGGGCATCAAGTCGAGGTACGCCAAGTTT
GCCCAATTGGGCGGTGTGGTCTTCTCCAGCCTGGATGGGGACGATTTCAA
GGGCCTCTACTCTCGCCCCTACCCCCTTCTGAGCGAGATCAACCGACAAT
TGGCCACTGGAGATGACTTTGATCCCAATAACTTCGAATGCGGAGTGGAT
GCCGCTCCCATTTGTGACGTGTTCGAATTCTTTGACTATTAAACTGTTGC
ATTCATTCAGGATTTAATATCCTCAAGCCTGTATAAACGTATCTGTGGAA
GGCCGACGCGTGAGAAGGAATGACAAAAAAGTGACAGGCAGAAGTGTGGC
CTTAATTATGGACCTGGTGTGGAACATTTCAACTCTAGTGTCAAAGTGGG
TGGGATTCACATACTTGATGTCCATTTCAAGCTCCGATGTACATAAACCA
CACCATCAACTAGATAGGGAGCAAG
back to top
Add to Basket