maker-scaffold580_size130538-snap-gene-0.31-mRNA-1, maker-scaffold580_size130538-snap-gene-0.31-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold580_size130538-snap-gene-0.31-mRNA-1
Unique Namemaker-scaffold580_size130538-snap-gene-0.31-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold580_size130538supercontigscaffold580_size130538:30486..33393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
set and mynd domain-containing protein 4-likemaker-scaffold580_size130538-snap-gene-0.31Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:859maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:859Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:860maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:860Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:861maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:861Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:862maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:exon:862Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:three_prime_utrmaker-scaffold580_size130538-snap-gene-0.31-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cds-1970665Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.31-mRNA-1:cds-1970666Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1970667auto1970667Tigriopus kingsejongensispolypeptide
Tk07491Tk07491Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07491

>Tk07491 ID=Tk07491|Name=Tk07491|organism=Tigriopus kingsejongensis|type=polypeptide|length=743bp
MVMTASATSPHNGPGGGLMAATAPNGGSTHSTDFESFYHAVCSELQNQGE
VHSMSKAFAQLTTDEDRIRFLIEKNFAQTHLQLGAGAGKKANNGHSGTPN
NAGWWREFNFKHKDRAESQRLRNLGNQVYQKNRLSEALEYYTQSISAAPH
PPPPNSFLLHGTEAEDTFSHEELALGYANRSAVLFQMKEYDLCIRDITRA
FDNSYPNNLMYKLFERKARCSKALKDFPRALESMKSAEMWMKHSTLSETK
NSSFKKEITKQVEFLEDKVGQMKIQDFTETAENRKNIITPVKVLEPPKFP
GEENAELPGARKEIQLVYTEDKGRHLIATEDISPGEILMVENPYSSILLP
EFYSTHCQTCFHRTIAPIPCWCCATVRFCCDECRSEAWERFHKVECQQLN
LILNSGVGKNAMLAFRILTSSGKIYLEYVINKVHEEMENRKKNPSNDRQF
GFNEEGVYDPADYRTIYCLIANTKHRGVGDLFKRSLMAVYLLKILEMTPF
FYNGGSDPRNVKLQDKVGMGAVILKHLQNLPCNAHEITEMELAGVANNAR
DSTVHEIGAASFGLLSLLNHSCDPNVVRHYYSNNSVVRAIRTIKKGEEIL
DNYGYHYAVMPKEERQRKLHNQYYFHCTCFACNHNWTIYTSLNPSPVALP
SLSPQEQKSTLSELQKSSKLYKKSFEGVLQGHFKDSQPVLLEHLRFLDQY
ISRPYREYNDCQEAIKQCYSATANCYRSKSSAPVGKKEKDVIV
back to top

mRNA from alignment at scaffold580_size130538:30486..33393-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold580_size130538-snap-gene-0.31-mRNA-1 ID=maker-scaffold580_size130538-snap-gene-0.31-mRNA-1|Name=maker-scaffold580_size130538-snap-gene-0.31-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2908bp|location=Sequence derived from alignment at scaffold580_size130538:30486..33393- (Tigriopus kingsejongensis)
GGCCGAACGAGTAGGACGACCCGAGGTCACCATCATTGCCCCAGCCCCTG
TGTCTGGCGTGTGCGGATCTGATTGCCCGGACATGTGCCACGCTAGAGAG
AGCTAGAGGTGGAACACGCCGCGAACGAGTGACGGATGGTCATGACGGCC
TCGGCCACTTCGCCCCATAATGGCCCCGGTGGAGGCCTCATGGCGGCCAC
GGCCCCCAACGGCGGCTCCACCCACTCGACCGACTTTGAGTCCTTCTACC
ACGCCGTCTGCTCCGAGCTGCAGAACCAGGGCGAAGTGCATTCCATGAGC
AAGGCCTTCGCCCAGCTCACCACGGACGAGGACCGCATACGCTTCCTGAT
CGAAAAGAACTTTGCCCAGACTCACTTGCAGCTAGGAGCCGGAGCTGGCA
AAAAGGCCAACAATGGCCACTCGGGTAAGCTCTCGCTGTCAAAGCCAAGG
TTCGCAAGCCTCGGGCTGCTTTCCGGGCTAAAAAGAACCACCCAATGTTA
ACTGGGATGGGCCTGGGGCAGGGTCTGGACCAGCCGCCACTCATGCGGGT
GTCTTGATTGCAGGGACGCCCAATAATGCAGGATGGTGGCGCGAGTTCAA
TTTCAAGCACAAGGATCGGGCCGAATCTCAGCGATTGCGGAACCTAGGCA
ATCAGGTCTACCAAAAGAACCGTCTGTCCGAGGCCCTGGAGTACTACACT
CAAAGCATCTCGGCTGCCCCGCATCCTCCGCCGCCCAACTCCTTCTTATT
GCATGGGACCGAGGCCGAGGATACGTTCAGCCACGAGGAGTTGGCCTTGG
GCTACGCCAACCGTTCGGCCGTGCTCTTTCAGATGAAGGAGTACGACTTG
TGCATCCGGGATATCACGCGGGCCTTCGACAACAGCTATCCGAATAATCT
CATGTACAAGCTGTTCGAGCGGAAGGCCCGTTGCTCCAAGGCCTTGAAGG
ACTTTCCGCGGGCTCTGGAGAGCATGAAGAGCGCCGAGATGTGGATGAAA
CATTCCACCCTGTCCGAGACCAAGAACTCGAGCTTCAAGAAGGAGATCAC
CAAGCAGGTCGAGTTCTTGGAGGACAAGGTGGGCCAGATGAAGATCCAGG
ACTTCACTGAAACGGCTGAGAATAGGAAAAACATCATCACGCCCGTCAAA
GTGCTGGAGCCTCCGAAGTTTCCGGGCGAGGAGAACGCGGAGCTGCCCGG
AGCTCGGAAAGAGATTCAGTTGGTTTACACCGAGGACAAAGGCCGCCATC
TCATCGCAACTGAGGATATCAGCCCTGGTGAGTGGTTCCCCATAGAGGCA
TGCGATATGCTCCACCCTTAACACTTCAATCCCTCTTGCAGGCGAAATAC
TAATGGTGGAAAATCCGTACTCTTCCATCCTCTTGCCAGAATTCTACAGC
ACTCATTGTCAAACTTGCTTCCATAGAACGATTGCCCCCATTCCCTGCTG
GTGCTGCGCCACGGTAAGAGTTTTCGTTGATACCATGTTCCACGTGCGCT
TGGGAGCCTCATGACGATTGAAACCTAACTTTTCAGGTGCGCTTTTGCTG
TGATGAATGCCGATCTGAAGCCTGGGAACGTTTCCATAAAGTGGAATGCC
AACAGCTGAACCTGATTCTCAACTCCGGGGTGGGGAAGAATGCCATGTTG
GCGTTCAGGATCCTCACCTCGTCTGGAAAGATCTACCTGGAATATGTCAT
CAATAAAGTGCACGAAGAGATGGAGAACCGAAAGAAGAATCCGAGCAACG
ATCGGCAGTTTGGCTTCAACGAAGAGGGTGTCTACGATCCGGCCGACTAT
CGGACCATCTACTGTCTCATCGCCAACACCAAGCATCGCGGCGTTGGAGA
CCTCTTCAAGCGCTCCCTCATGGCCGTGTACTTGCTCAAGATCCTGGAAA
TGACGCCGTTCTTTTACAATGGTGGCTCCGATCCGAGGAATGTCAAGTTG
CAGGATAAAGTGGGCATGGGGGCCGTGATCCTCAAGCACTTGCAAAACCT
ACCCTGCAACGCCCACGAGATCACCGAAATGGAACTGGCCGGCGTGGCCA
ATAATGCACGAGACTCCACTGTTCACGAAATTGGTGCCGCCTCATTTGGA
CTTCTCAGTCTTCTCAATCACTCCTGTGATCCCAATGTGGTGAGACACTA
TTATAGCAATAACTCAGTCGTTCGAGCCATTCGTACCATTAAAAAAGGCG
AGGAGATCTTGGACAACTACGGTTACCATTATGCAGTCATGCCCAAGGAG
GAGCGTCAGAGGAAGCTTCACAATCAGTACTATTTCCATTGTACATGCTT
CGCCTGCAACCACAACTGGACAATTTACACTAGTCTAAACCCCAGCCCTG
TAGCTCTTCCCAGTCTAAGTCCGCAAGAGCAAAAATCAACCCTCTCCGAG
CTCCAGAAGTCGTCCAAGTTGTACAAGAAATCCTTTGAGGGTGTGCTACA
AGGCCACTTCAAGGACTCGCAACCCGTCTTACTGGAGCATTTGAGATTCT
TGGACCAATACATCAGCCGACCCTACCGCGAATACAACGATTGTCAAGAA
GCCATCAAACAATGTTACAGTGCCACCGCCAATTGCTATCGAAGCAAGTC
CTCTGCACCGGTCGGCAAGAAAGAGAAGGACGTCATTGTCTGACAGGATT
ACTCGATGGCCTTTGGGCCGATCAATAATGAAGTGCCAATAATGAATCAT
ATGCATCAATGTACTGTACCTCCGTGTACACGTAGTTTGAGACAATCCAG
AACTTGCAACACCCACTGAAGACTATGGAAATTGTTATTTATTCAATCTC
AATTTTATATATAGATATAGCCACCACCCTTCTTTGTCTGTCTGAAAAAA
TATCGACCCTGACAATATTTGTCCAGTTCTTTGCCTTGTCCAATAAATCT
GACATCGC
back to top
Add to Basket