maker-scaffold580_size130538-snap-gene-0.32-mRNA-1, maker-scaffold580_size130538-snap-gene-0.32-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold580_size130538-snap-gene-0.32-mRNA-1
Unique Namemaker-scaffold580_size130538-snap-gene-0.32-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold580_size130538supercontigscaffold580_size130538:38099..40724 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
phosphatidylcholine:ceramide cholinephosphotransferase 2-like isoform x6maker-scaffold580_size130538-snap-gene-0.32Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:871maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:871Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:872maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:872Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:873maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:873Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:874maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:874Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:875maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:exon:875Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:three_prime_utrmaker-scaffold580_size130538-snap-gene-0.32-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cds-1974039Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cds-1974040Tigriopus kingsejongensisexon
maker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cdsmaker-scaffold580_size130538-snap-gene-0.32-mRNA-1:cds-1974041Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1974042auto1974042Tigriopus kingsejongensispolypeptide
Tk07495Tk07495Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07495

>Tk07495 ID=Tk07495|Name=Tk07495|organism=Tigriopus kingsejongensis|type=polypeptide|length=476bp
MREDQERMLPPNESQGQGQTYGSFTDLNESEGGAKGGAIKRTGKSTESNA
DGEEKKPRKTGSNSGDNNDSSVISTDPYSQSTHPTRVQDSCSSDDEAGRT
NAHGYTRRKSRHPKNSSVRIEVDGPPPRPPSELGTLSQGQDALEIPAEPL
KTLFAFVFLFLAWVATTTSLALTHERVPNIPPLPDVFLDNVQYQSWGLDA
SEIVIMIATASAFALALFHQHRFIVLRRIFFLAGIHYFYRAVTFYITVLP
KADPKYPCAPKLGHITFVEIAQRVLKLLSGMGLSINGSHIYCGDYVYSGH
TMTLLMTYLVISEYSPRSWFVLRWISLSTTIAGVVTLLFARGHYSIDVVI
AYWITTRLWWIYHTMADNQHVIHAENSSNRLTKFWWWYVFAYLEGNVRRP
LPKGYNWPLPSQLQHIPGTIWRKIRGSSAASADLPADSLHPDNDPEAGRP
ALGQAVVVEGHRAGGASSSASAVSLR
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mRNA from alignment at scaffold580_size130538:38099..40724-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold580_size130538-snap-gene-0.32-mRNA-1 ID=maker-scaffold580_size130538-snap-gene-0.32-mRNA-1|Name=maker-scaffold580_size130538-snap-gene-0.32-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2626bp|location=Sequence derived from alignment at scaffold580_size130538:38099..40724- (Tigriopus kingsejongensis)
GCCTGCTTCATTGAATGAGCTGCCAGAAAAGGCTGTGCAGCGTTCACGTG
ACCCGTTCTGTGCAACAATCAATACAACAACATTGCTCAAGGAACTCGTT
TTCCCCCTACTTAAGACGAAACCTATCAAGTGTTAAAAGAAAGACTCCAC
AAGTGTTCCGTTATGAACAATTCAGCTGTTGACGAGGACTCGCACTCAGT
TGTCCTTTGTAAGCCTTTGGTAAAATAACCTTCCCAATTCAACTCCAATT
CAAGAGGTATTCTGTTCCTATGGTGCTCTTTCTCCATGGCTTAGACAATG
AGGGAAGATCAAGAGAGGTAATTTGCGTGTCTGTGCCTTGTCCGTGCTGG
AATTCATAGTCGACGACTGGATATTCAGAAGCTTGAGGTTTGTCCCACAG
AGTTATTCTTGAGCCTGCACGCCATAGCCCTAAAGGTGCTATCGCATCTG
ATCTCGGTGACGGTGTTTTTTAGCATTTTGGGCATCAAATTTATGCATTC
TCACATCCAGGAAAGTGGAGAGGGACTCGCTCTCACTCTCGTTCGCACTC
AGATCAAAGGGAAAAGGTGCTAATCCGGTTACGTTGCCTTTTATTTTCAG
AATGCTCCCTCCCAACGAGTCCCAAGGCCAGGGTCAGACCTATGGATCTT
TCACTGATCTCAATGAATCTGAAGGCGGCGCCAAGGGTGGTGCCATCAAA
CGGACGGGAAAGTCGACCGAATCCAATGCCGATGGCGAGGAAAAGAAGCC
CAGGAAAACGGGGAGCAATAGTGGTGATAACAATGACAGCTCTGTGATAT
CAACCGTAAGCTCACACTATTCACATGCGCCTCTCGAGGCGATTGCTTTC
ACTGGATCGGCTCTTGTAGGACCCATACTCTCAATCCACGCACCCAACTC
GAGTGCAGGACAGTTGTTCCTCCGACGATGAGGCGGGTCGAACCAACGCC
CACGGGTACACGCGGAGGAAGTCACGACATCCCAAGAATTCCTCCGTACG
TATCGAGGTCGACGGGCCCCCGCCCCGTCCTCCGTCGGAATTGGGCACTT
TGAGCCAAGGGCAAGATGCCCTGGAGATACCGGCCGAGCCTTTGAAGACT
CTGTTTGCCTTCGTGTTTCTGTTCCTGGCTTGGGTGGCCACCACCACGAG
CCTCGCCCTGACCCACGAGCGGGTCCCCAATATCCCTCCTTTGCCGGACG
TGTTTCTAGACAATGTCCAGTACCAGTCTTGGGGCTTGGACGCCTCGGAA
ATTGTCATCATGATCGCCACAGCATCTGCTTTTGCCTTGGCCTTGTTCCA
CCAGCACAGGTTAGTGATGCAACTGTCCCTGGGTCCAAATGGAGCCTTAA
TCGCATCCTTCGTTCACCCCCTTAGGTTCATCGTCTTGAGGCGGATATTC
TTCCTAGCTGGTATTCACTACTTCTATCGGGCTGTGACCTTCTACATCAC
TGTGTTACCCAAAGCCGACCCCAAATACCCTTGCGCTCCCAAGTTGGGCC
ACATCACGTTCGTGGAGATAGCCCAGAGGGTGCTCAAGCTTCTATCGGGG
ATGGGCCTCTCCATCAATGGGAGCCACATCTACTGTGGCGACTATGTCTA
CTCTGGCCACACCATGACCCTCCTCATGACCTACTTGGTGATCAGCGAAT
GTAAGCGACCAGGCCGTCCCCGCACTTCCCTCACTCTGACTAATCCGGAC
CTTGGCTTTCTAGATTCGCCCCGAAGCTGGTTCGTCTTGCGCTGGATTTC
CCTCTCGACCACCATTGCTGGGGTGGTAACGTTGCTTTTTGCCCGGGGGC
ACTACTCGATTGACGTGGTGATCGCGTACTGGATCACCACCCGGCTGTGG
TGGATCTACCACACCATGGCTGACAACCAGCACGTCATCCACGCCGAGAA
CTCTTCCAATCGACTGACCAAGTTCTGGTGGTGGTACGTGTTCGCTTACT
TGGAGGGGAATGTTCGCCGACCTCTTCCCAAAGGCTACAACTGGCCTCTG
CCCTCGCAATTGCAACACATTCCGGGCACGATCTGGCGGAAGATCCGAGG
ATCCTCTGCAGCCTCTGCAGACTTGCCCGCGGACAGTCTGCACCCCGACA
ATGACCCAGAGGCCGGCCGGCCGGCCTTGGGCCAAGCCGTGGTGGTTGAA
GGCCATCGAGCTGGAGGCGCTTCCAGCTCGGCATCGGCCGTGTCCCTCCG
ATGACCCTGGGAGACGTTCCTGGTCTCCCTGCGAGTTTGAGTATTCAGGA
CTGCTTTGAGAGATTCATACTGAGTTGAGGTTGTGGCTCCAACCCACAAT
GGCCATAGAGAGAGAGTCATCCTTATGGCATTTCGCCGATGACTACTCCC
CACGCTATATAATGATTCCCCCATTGGATGTATACCACTTTCATGACCCT
GGTCAATGAGCCCCGTGGCAAAGCCGTCATCTACCTACAATAGGCAAGAA
TCCTTTATTCTTGCAGCCTCGAGTTTGCCTTAGCCACGTGAAGAAAATGC
CTCTGGTGTGTGAGAAAATTTCATTCTGTAATTGTTCCTTTTAATGTACC
TACCCAAAGATGACCCCACCAGAATAGCATTATGCCCATCAGCCCGCCCC
CCCCCCCATCCATTAAGATATATAAC
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