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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR025749 | Sphingomyelin synthase-like domain | PFAM | PF14360 | PAP2_C | coord: 292..364 e-value: 4.2E-22 score: 78.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 432..476 |
None | No IPR available | PANTHER | PTHR21290 | SPHINGOMYELIN SYNTHETASE | coord: 80..411 |
None | No IPR available | PANTHER | PTHR21290:SF27 | PHOSPHATIDYLCHOLINE:CERAMIDE CHOLINEPHOSPHOTRANSFERASE 1 | coord: 80..411 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 193..217 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 218..228 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 249..320 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..152 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 341..476 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 153..173 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 174..192 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 321..340 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 229..248 |
None | No IPR available | CDD | cd01610 | PAP2_like | coord: 298..363 e-value: 0.0016659 score: 36.2843 |
None | No IPR available | TMHMM | TMhelix | | coord: 290..312 |
None | No IPR available | TMHMM | TMhelix | | coord: 153..175 |
None | No IPR available | TMHMM | TMhelix | | coord: 195..217 |
None | No IPR available | TMHMM | TMhelix | | coord: 319..340 |
None | No IPR available | TMHMM | TMhelix | | coord: 344..361 |
None | No IPR available | TMHMM | TMhelix | | coord: 224..246 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07495 ID=Tk07495|Name=Tk07495|organism=Tigriopus kingsejongensis|type=polypeptide|length=476bp MREDQERMLPPNESQGQGQTYGSFTDLNESEGGAKGGAIKRTGKSTESNA DGEEKKPRKTGSNSGDNNDSSVISTDPYSQSTHPTRVQDSCSSDDEAGRT NAHGYTRRKSRHPKNSSVRIEVDGPPPRPPSELGTLSQGQDALEIPAEPL KTLFAFVFLFLAWVATTTSLALTHERVPNIPPLPDVFLDNVQYQSWGLDA SEIVIMIATASAFALALFHQHRFIVLRRIFFLAGIHYFYRAVTFYITVLP KADPKYPCAPKLGHITFVEIAQRVLKLLSGMGLSINGSHIYCGDYVYSGH TMTLLMTYLVISEYSPRSWFVLRWISLSTTIAGVVTLLFARGHYSIDVVI AYWITTRLWWIYHTMADNQHVIHAENSSNRLTKFWWWYVFAYLEGNVRRP LPKGYNWPLPSQLQHIPGTIWRKIRGSSAASADLPADSLHPDNDPEAGRP ALGQAVVVEGHRAGGASSSASAVSLR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR025749 | Sphingomyelin_synth-like_dom |
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